Jatropha Genome Database

JcCA0150301.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0150301.10 - phase: 0 /partial
         (248 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g106610.1 hypothetical protein chr03_pseudomolecule_I...   122   2e-28
IMGA|Medtr6g035630.1 hypothetical protein chr06_pseudomolecule_I...   121   4e-28
IMGA|Medtr4g028440.1 hypothetical protein chr04_pseudomolecule_I...   119   1e-27
IMGA|Medtr6g035760.1 hypothetical protein chr06_pseudomolecule_I...   118   3e-27
IMGA|Medtr3g106600.1 hypothetical protein chr03_pseudomolecule_I...    77   9e-15
IMGA|Medtr4g028620.1 hypothetical protein chr04_pseudomolecule_I...    77   9e-15
IMGA|Medtr3g106580.1 hypothetical protein chr03_pseudomolecule_I...    53   1e-07
IMGA|Medtr4g028600.1 hypothetical protein chr04_pseudomolecule_I...    53   1e-07

>IMGA|Medtr3g106610.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 26874860-26868257 E
           EGN_Mt090430 20090702
          Length = 543

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 115/215 (53%), Gaps = 15/215 (6%)

Query: 37  DQAWYDVKVS-RNDDILTVKYVNFSEEFNETFHVGKFKTIDKVNDFKRRFRQSSVQLQDQ 95
           D AWY V V+   ++ L VKY   ++E +  F  G F +++ + +F+ RFR  SVQ+QD 
Sbjct: 60  DDAWYTVSVTFEGNESLRVKYEKNTDEIDNLFEPGFFNSMEDLQEFETRFRPLSVQVQDH 119

Query: 96  DCHKIFQGKTVCASYNFNNGEVKFFDAMVVEVLNEKHKVGXXXXXCSCTYVLKWHDGSLE 155
            C ++  G  VCAS+ F   +++F+DA VVEV   KH        C CT+ L W  G + 
Sbjct: 120 QCRELVPGVRVCASHEFGPDDLRFYDAHVVEVKERKHS-RKKDAECLCTFKLLWSHGPMV 178

Query: 156 GERTFAKISDICLTPPGNRVDPSLAAFLKIAMERIDKGSLRCEV----AGHEEPNTASLE 211
           GE T A+I +ICL  P    DP++A+FL+I   RI+  S +  V     G E  N   ++
Sbjct: 179 GEFTDAEICNICLVQPVLEYDPAVASFLEITRRRIESQSGQEMVVYCNTGIEAKNHTEIK 238

Query: 212 SNPVLNIEAYFMKL------RRQRKNRFAVRTTEG 240
           +   +    YF ++      RR +++    R++EG
Sbjct: 239 TKSKM---GYFERMQKFQAKRRAKRSVLGTRSSEG 270


>IMGA|Medtr6g035630.1 hypothetical protein
           chr06_pseudomolecule_IMGAG_V3 7661499-7660136 E
           EGN_Mt090430 20090702
          Length = 246

 Score =  121 bits (303), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 103/170 (60%), Gaps = 3/170 (1%)

Query: 27  QGFAMEFQS-DDQAWYDVKVS-RNDDILTVKYVNFSEEFNETFHVGKFKTIDKVNDFKRR 84
           Q +  EF++ +D AWY V V+ +  + L V Y  F++  +  F    F +++K+++F++R
Sbjct: 9   QSYVTEFRNYEDGAWYTVTVTLQEKETLRVGYEEFTDGDDNLFEQSSFDSLEKLHEFEKR 68

Query: 85  FRQSSVQLQDQDCHKIFQGKTVCASYNFNNGEVKFFDAMVVEVLNEKHKVGXXXXXCSCT 144
           FR  S+Q QD +CHK+  G  VCAS +FN+ +++F+DA VV+ + E +        C CT
Sbjct: 69  FRPLSIQAQDHECHKLVHGVRVCASLHFNSDDLRFYDA-VVDRVEEHNHSRTKDAECLCT 127

Query: 145 YVLKWHDGSLEGERTFAKISDICLTPPGNRVDPSLAAFLKIAMERIDKGS 194
           ++L W  G  EG+ + A I DIC+  P +   P++A+FL+I   RI+  S
Sbjct: 128 FILSWLQGPNEGKLSAAGIGDICIVQPISEPVPAVASFLEITRRRIESKS 177


>IMGA|Medtr4g028440.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 6544478-6546425 E
           EGN_Mt090430 20090702
          Length = 258

 Score =  119 bits (298), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 93/159 (58%), Gaps = 2/159 (1%)

Query: 37  DQAWYDVKVS-RNDDILTVKYVNFSEEFNETFHVGKFKTIDKVNDFKRRFRQSSVQLQDQ 95
           D AWY V V+   ++ L VKY   ++E +  F  G F +++ + +F+ RFR  SVQ+QD 
Sbjct: 60  DDAWYTVSVTFEGNESLRVKYEKNTDEIDNLFEPGFFNSMEDLQEFETRFRPLSVQVQDH 119

Query: 96  DCHKIFQGKTVCASYNFNNGEVKFFDAMVVEVLNEKHKVGXXXXXCSCTYVLKWHDGSLE 155
            C ++  G  VCAS+ F   +++F+DA VVEV   KH        C CT+ L W  G + 
Sbjct: 120 QCRELVPGVRVCASHEFGPDDLRFYDAHVVEVKERKHS-RKKDAECLCTFKLLWSHGPMV 178

Query: 156 GERTFAKISDICLTPPGNRVDPSLAAFLKIAMERIDKGS 194
           GE T A+I +ICL  P  + DP++A+FL+I   RI+  S
Sbjct: 179 GEFTDAEICNICLVQPVLKYDPAVASFLEITRRRIESQS 217


>IMGA|Medtr6g035760.1 hypothetical protein
           chr06_pseudomolecule_IMGAG_V3 7693471-7697870 E
           EGN_Mt090430 20090702
          Length = 404

 Score =  118 bits (295), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 103/176 (58%), Gaps = 4/176 (2%)

Query: 29  FAMEFQS-DDQAWYDVKVS-RNDDILTVKYVNFSEEFNETFHVGKFKTIDKVNDFKRRFR 86
           +  E+Q+ +D AWY V V+ +  + L V Y  F++ +   F    F +++++++F++RFR
Sbjct: 20  YVTEYQNYEDDAWYVVMVTLQEKETLQVSYKKFNDVYKNLFPSSLFHSLEELHEFEKRFR 79

Query: 87  QSSVQLQDQDCHKIFQGKTVCASYNFNNGEVKFFDAMVVEVLNEKHKVGXXXXXCSCTYV 146
             SVQ QD +CHK+  G  VCAS  FN+  ++F+DA VV+ + E +        C CT+ 
Sbjct: 80  PVSVQAQDYECHKLVHGVRVCASVRFNSNGLRFYDA-VVDTVEEHNHSQKKDEKCLCTFN 138

Query: 147 LKWHDGSLEGERTFAKISDICLTPPGNRVDPSLAAFLKIAMERIDKGSLRCEVAGH 202
           L W  G  EG+ + A+I DIC+  P      +LA+FL+I+  RI+  S R E+  H
Sbjct: 139 LSWLQGPNEGKLSAARIGDICIVQPIREHVAALASFLQISRRRIESNS-RQELVAH 193


>IMGA|Medtr3g106600.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 26865898-26865419 H
           EGN_Mt090430 20090702
          Length = 159

 Score = 76.6 bits (187), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 69/104 (66%), Gaps = 2/104 (1%)

Query: 23  PPRIQGFAMEFQS-DDQAWYDVKVSRND-DILTVKYVNFSEEFNETFHVGKFKTIDKVND 80
           P + Q +  EF++ +D AWY V V+  + + L V+Y  F++E +  F    F++++++ +
Sbjct: 34  PEQNQNYVTEFRNYEDGAWYTVMVTLEEKETLRVRYEKFTDEEDNIFEPSFFESLEELVE 93

Query: 81  FKRRFRQSSVQLQDQDCHKIFQGKTVCASYNFNNGEVKFFDAMV 124
           F++RFR  SVQ+QD +C K+ +G  VCAS +F   +++F+DA+V
Sbjct: 94  FEKRFRPLSVQVQDYECRKLVKGVRVCASLHFTPDDLRFYDAVV 137


>IMGA|Medtr4g028620.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 6623322-6622843 H
           EGN_Mt090430 20090702
          Length = 159

 Score = 76.6 bits (187), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 69/104 (66%), Gaps = 2/104 (1%)

Query: 23  PPRIQGFAMEFQS-DDQAWYDVKVSRND-DILTVKYVNFSEEFNETFHVGKFKTIDKVND 80
           P + Q +  EF++ +D AWY V V+  + + L V+Y  F++E +  F    F++++++ +
Sbjct: 34  PEQNQNYVTEFRNYEDGAWYTVMVTLEEKETLRVRYEKFTDEEDNIFEPSFFESLEELVE 93

Query: 81  FKRRFRQSSVQLQDQDCHKIFQGKTVCASYNFNNGEVKFFDAMV 124
           F++RFR  SVQ+QD +C K+ +G  VCAS +F   +++F+DA+V
Sbjct: 94  FEKRFRPLSVQVQDYECRKLVKGVRVCASLHFTPDDLRFYDAVV 137


>IMGA|Medtr3g106580.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 26862602-26858942 E
           EGN_Mt090430 20090702
          Length = 307

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query: 141 CSCTYVLKWHDGSLEGERTFAKISDICLTPPGNRVDPSLAAFLKIAMERIDKGS 194
           C CT++L W  G  EG+ T A+I DIC+  P    DP++A FL+I   R++  S
Sbjct: 35  CLCTFILSWLHGPNEGKLTAAEIGDICIVQPIKEHDPAVAFFLEITRRRLESQS 88


>IMGA|Medtr4g028600.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 6620024-6616364 E
           EGN_Mt090430 20090702
          Length = 307

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query: 141 CSCTYVLKWHDGSLEGERTFAKISDICLTPPGNRVDPSLAAFLKIAMERIDKGS 194
           C CT++L W  G  EG+ T A+I DIC+  P    DP++A FL+I   R++  S
Sbjct: 35  CLCTFILSWLHGPNEGKLTAAEIGDICIVQPIKEHDPAVAFFLEITRRRLESQS 88