Jatropha Genome Database

JcCA0149941.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149941.20 + phase: 0 /partial
         (359 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g105840.1 Aminotransferase, class V; chr01_pseudomole...   526   e-150
IMGA|Medtr7g134940.1 Aminotransferase, class V; chr07_pseudomole...   475   e-134
IMGA|Medtr3g105250.1 Aminotransferase, class V; chr03_pseudomole...    53   2e-07

>IMGA|Medtr1g105840.1 Aminotransferase, class V;
           chr01_pseudomolecule_IMGAG_V3 21912173-21913552 E
           EGN_Mt090430 20090702
          Length = 450

 Score =  526 bits (1354), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 247/360 (68%), Positives = 292/360 (81%), Gaps = 4/360 (1%)

Query: 1   MEN-EDPRNGESVHHQHVTKKPRLACVITESEIQEEFSHHQSGIARINNGSFGSCPQSVL 59
           M+N +DPRNG     Q  +KKP+L   I+  E+  EFSHHQ+ +ARINNGSFGSCP+S+L
Sbjct: 1   MDNHDDPRNGTV---QPDSKKPKLTHPISSHELLHEFSHHQTAVARINNGSFGSCPRSIL 57

Query: 60  AAQREWQLKWLQQPDDFYFNTLRKGILHSRAVVKDLINADDVDEISLVDNATTAAAIVLQ 119
            AQ  WQL++LQQPDDF+FNTLR GIL SR ++K+LINADDV+EISL+DNATTAAAIVLQ
Sbjct: 58  TAQTTWQLRFLQQPDDFFFNTLRNGILDSRKIIKNLINADDVEEISLIDNATTAAAIVLQ 117

Query: 120 QIGRSFSEGKFCKNDAVLVFHCTFEAVKKSIQAYVTRAGGSVIEVQLPFPVNSDEKIIAA 179
           QIG  FS GKFC+ND V++FHC ++AVKKSI+AYV   GGSVIEV+LPFPVNS+E+IIA 
Sbjct: 118 QIGHHFSSGKFCRNDTVIIFHCAYQAVKKSIEAYVIPVGGSVIEVELPFPVNSNEEIIAE 177

Query: 180 FRKELKNGKSNGKRVRLAIIDHITSMPCVVTPIRELVNICREEGVDQVFVDAAHAVGSVK 239
           F+K ++ GK NG RVRLAIIDHITSMP VV P+REL+ +CRE  VDQVFVD AHA+GS++
Sbjct: 178 FKKGIERGKINGGRVRLAIIDHITSMPSVVIPVRELIRVCRENEVDQVFVDGAHALGSME 237

Query: 240 VDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKRXXXXXXXXXXXXXEYGNGLPIESSWIG 299
           VDVKEIGADFYVSNL+KWFF PPSVAF+YC K              EYGNGLP ES+W+G
Sbjct: 238 VDVKEIGADFYVSNLYKWFFSPPSVAFMYCNKNKKLNDVHHPVVAHEYGNGLPAESAWVG 297

Query: 300 TRDYSSQLAVPAALEFVNRFEGGIYGIIKRNHGKVVEMGKMLAEAWGTNLGAPPEMCAGM 359
            RDYS QL VP+ +EFVNRFEGGI GI+KRNH  VV+MG ML EAWGTNLG+PPEMCA M
Sbjct: 298 MRDYSPQLVVPSIMEFVNRFEGGIEGIMKRNHNMVVKMGVMLKEAWGTNLGSPPEMCASM 357


>IMGA|Medtr7g134940.1 Aminotransferase, class V;
           chr07_pseudomolecule_IMGAG_V3 31988116-31995241 E
           EGN_Mt090430 20090702
          Length = 464

 Score =  475 bits (1222), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 224/365 (61%), Positives = 284/365 (77%), Gaps = 7/365 (1%)

Query: 2   ENEDPRNGESVHHQHVT-KKPRLAC---VITESEIQEEFSHHQSGIARINNGSFGSCPQS 57
           +N   R+   ++  H T KKP+L+     IT SEIQ EFSHH S ++RINNGSFGSCP S
Sbjct: 5   KNNHHRSIPDINGTHPTPKKPKLSSSSNFITASEIQSEFSHHDSAVSRINNGSFGSCPSS 64

Query: 58  VLAAQREWQLKWLQQPDDFYFNTLRKGILHSRAVVKDLINADDVDEISLVDNATTAAAIV 117
           +L+AQ++WQLK+L+QPD FYFN L+  I +SR+++++L+NA D++EIS+VDNATTAAAIV
Sbjct: 65  ILSAQQQWQLKYLRQPDHFYFNHLKPAINNSRSIIQNLVNAKDINEISIVDNATTAAAIV 124

Query: 118 LQQIGRSFSEGKFCKNDAVLVFHCTFEAVKKSIQAYVTRAGGSVIEVQLPFPVNSDEKII 177
           LQ     F EGKF K D V++ H  + AVKKS++AYVTRAGG VIEV LPFPV+S+++I+
Sbjct: 125 LQHTAWCFREGKFNKGDVVVMLHYAYGAVKKSMEAYVTRAGGKVIEVPLPFPVSSNDEIV 184

Query: 178 AAFRKELKNGKSNGKRVRLAIIDHITSMPCVVTPIRELVNICREEGVDQVFVDAAHAVGS 237
             FRK L+ GK +GK++RLA+IDH+TSMPCVV P++EL+ ICREEGV+QVFVDAAH++G 
Sbjct: 185 TEFRKALEKGKVDGKKIRLAVIDHVTSMPCVVIPVKELIQICREEGVEQVFVDAAHSIGC 244

Query: 238 VKVDVKEIGADFYVSNLHKWFFCPPSVAFLYCRKRXXX---XXXXXXXXXXEYGNGLPIE 294
             VD+++IGADFY SNLHKWFFCPPS+AFLY +K                 EYGNGL +E
Sbjct: 245 TDVDMQDIGADFYTSNLHKWFFCPPSIAFLYTKKNPKTGGGGDLHHPVVSHEYGNGLAVE 304

Query: 295 SSWIGTRDYSSQLAVPAALEFVNRFEGGIYGIIKRNHGKVVEMGKMLAEAWGTNLGAPPE 354
           S+WIGTRDYS+QL VP ALEFVNRFEGGI GI KRNH  V+EMG+ML +AWGT+LG+P  
Sbjct: 305 SAWIGTRDYSAQLVVPEALEFVNRFEGGIEGIKKRNHEAVIEMGEMLVKAWGTHLGSPKH 364

Query: 355 MCAGM 359
           MCA M
Sbjct: 365 MCASM 369


>IMGA|Medtr3g105250.1 Aminotransferase, class V;
           chr03_pseudomolecule_IMGAG_V3 26286489-26280241 E
           EGN_Mt090430 20090702
          Length = 500

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 36/242 (14%)

Query: 41  SGIARINNGSFGSCPQSVLAAQREWQLKWLQQPDDFYFNTLRKGILHSRAVVKD------ 94
           S +  I+N +    P +V+        K LQ   + Y + + +GI +  A   D      
Sbjct: 74  SKLVYIDNAATSQKPAAVV--------KALQDYYEGYNSNVHRGIHYLSAKATDEYESAR 125

Query: 95  -----LINADDVDEISLVDNATTAAAIVLQQIGRSFSEGKFCKNDAVLVFHCTFEAVKKS 149
                 INA D  EI    NAT A  +V    G S       + D +++      +    
Sbjct: 126 RKVAAFINASDSREIVFTRNATEAINLVAYSWGLS----NLKQGDEIVLTVAEHHSAIVP 181

Query: 150 IQAYVTRAGGSVIEVQLPFPVNSDEKIIAAFRKELKNGKSNGKRVRLAIIDHITSMPCVV 209
            Q    + G  +  V L    N DE       KE+ +     K+ ++  + H++++   V
Sbjct: 182 WQLVAQKVGAVLKFVNL----NQDEIPDIDKLKEVLS-----KKTKIVAVHHVSNVLASV 232

Query: 210 TPIRELVNICREEGVDQVFVDAAHAVGSVKVDVKEIGADFYVSNLHKWFFCPPS-VAFLY 268
            PIR++ +     G  +V VDA  +V  + VDV+ + ADF V++ HK   C P+ + FLY
Sbjct: 233 LPIRDIAHWAHGVGA-KVLVDACQSVPHMVVDVQNLDADFLVASSHK--MCGPTGIGFLY 289

Query: 269 CR 270
            +
Sbjct: 290 GK 291