Jatropha Genome Database

JcCA0149621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149621.10 + phase: 0 
         (355 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g092090.1 Nucleotidyl transferase; Trimeric LpxA-like...   523   e-149
IMGA|Medtr5g088050.1 Nucleotidyl transferase; Trimeric LpxA-like...   520   e-148
IMGA|Medtr8g148370.1 Nucleotidyl transferase chr08_pseudomolecul...   213   2e-55
IMGA|Medtr8g148380.1 Trimeric LpxA-like chr08_pseudomolecule_IMG...   203   1e-52
IMGA|Medtr6g009470.1 Bacterial transferase hexapeptide repeat ch...   168   3e-42
IMGA|Medtr4g097110.1 Trimeric LpxA-like chr04_pseudomolecule_IMG...    82   3e-16

>IMGA|Medtr3g092090.1 Nucleotidyl transferase; Trimeric LpxA-like
           chr03_pseudomolecule_IMGAG_V3 21581823-21585329 F
           EGN_Mt090430 20090702
          Length = 361

 Score =  523 bits (1347), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 252/355 (70%), Positives = 303/355 (85%)

Query: 1   MKALILAGGFGTHLMPLTVTVPRALVEFANKPIILYQIEALKGVGVSEVVLAINYKQEVI 60
           MKALIL GGFGT L PLT++VP+ LV+FANKP+IL+QIEALK +GV+EVVLAINY+ EV+
Sbjct: 1   MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKDIGVTEVVLAINYQPEVM 60

Query: 61  LEFLKEHEKKLGIKITCSQETKPLGTAGSLALAKDKLIDGTGEPFFVLNSDVISEYPLME 120
           L FLK+ E+KL IKITCSQET+PLGTAG LALA+DKLIDG+GEPFFVLNSDVISEYPL E
Sbjct: 61  LNFLKDFEEKLDIKITCSQETEPLGTAGPLALARDKLIDGSGEPFFVLNSDVISEYPLKE 120

Query: 121 MIEFHKGHGGQASIMVTEVIDPSKYGVVVIREATGMVQEFAEKPSTFSRNKINAGIYLLN 180
           MI+FHK HGG+ASIMVT+V +PSKYGVVV+ E TG V++F EKP  F  NKINAGIYLLN
Sbjct: 121 MIKFHKSHGGEASIMVTKVDEPSKYGVVVMEETTGQVEKFVEKPKLFVGNKINAGIYLLN 180

Query: 181 PSILDQIELKATSIEKEVFPRIAEDKKLFAMSLPGFWMDIGQPRDYIAGQRLYLQFLQQN 240
           PS+LD IEL+ TSIEKEVFP+IA +KKL+AM LPGFWMDIGQPRDYI G RLYL  L++ 
Sbjct: 181 PSVLDHIELRPTSIEKEVFPKIAANKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKK 240

Query: 241 SSAKLATGPKIVGNVLIDESAVIEDGSLIGPNVVIGPDCKIESGVSLSFCTLLRGVHIKK 300
           +S+KLA+GP I+GNV++ E+A I +G LIGP+V IGP C IESGV LS CT++RGV IKK
Sbjct: 241 TSSKLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSCCTVMRGVRIKK 300

Query: 301 DAFICSSIMGWNSSVGRGARLQNMTILGEKAKVCDEVFSNGAVLQPHEEMKSSIF 355
            A I SSI+GW+S+VG+ AR++NMTILGE   V DEV+SNG V+ PH+E+K+SI 
Sbjct: 301 HACISSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVVLPHKEIKTSIL 355


>IMGA|Medtr5g088050.1 Nucleotidyl transferase; Trimeric LpxA-like
           chr05_pseudomolecule_IMGAG_V3 34105212-34109692 F
           EGN_Mt090430 20090702
          Length = 361

 Score =  520 bits (1340), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 249/355 (70%), Positives = 301/355 (84%)

Query: 1   MKALILAGGFGTHLMPLTVTVPRALVEFANKPIILYQIEALKGVGVSEVVLAINYKQEVI 60
           MKALIL GGFGT L PLT++VP+ LV+FANKP+IL+QIEALK  GV+EVVLAINY+ EV+
Sbjct: 1   MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKATGVTEVVLAINYQPEVM 60

Query: 61  LEFLKEHEKKLGIKITCSQETKPLGTAGSLALAKDKLIDGTGEPFFVLNSDVISEYPLME 120
           L FLK+ E KLGI I+CSQET+PLGTAG LALA+DKLID +GEPFFVLNSDVIS+YPL E
Sbjct: 61  LNFLKDFEAKLGITISCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISDYPLKE 120

Query: 121 MIEFHKGHGGQASIMVTEVIDPSKYGVVVIREATGMVQEFAEKPSTFSRNKINAGIYLLN 180
           MIEFHK HGG+ASIMVT+V +PSKYGVVV+ E TG V++F EKP  F  NKINAGIYLLN
Sbjct: 121 MIEFHKSHGGEASIMVTKVDEPSKYGVVVMEETTGQVEKFVEKPKLFVGNKINAGIYLLN 180

Query: 181 PSILDQIELKATSIEKEVFPRIAEDKKLFAMSLPGFWMDIGQPRDYIAGQRLYLQFLQQN 240
           PS+LD+IEL+ TSIEKE+FP+IA +KKL+AM LPGFWMDIGQPRDYI G RLYL  L++ 
Sbjct: 181 PSVLDRIELRPTSIEKEIFPKIAAEKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKK 240

Query: 241 SSAKLATGPKIVGNVLIDESAVIEDGSLIGPNVVIGPDCKIESGVSLSFCTLLRGVHIKK 300
           SS+KLA G  IVGNV++DE+A I +G LIGP+V IGP C +ESGV LS CT++RGV IKK
Sbjct: 241 SSSKLAGGSNIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKK 300

Query: 301 DAFICSSIMGWNSSVGRGARLQNMTILGEKAKVCDEVFSNGAVLQPHEEMKSSIF 355
            A I SSI+GW+S+VG+ AR++NMTILGE   VCDE++SNG V+ PH+E+K++I 
Sbjct: 301 HACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKTNIL 355


>IMGA|Medtr8g148370.1 Nucleotidyl transferase
           chr08_pseudomolecule_IMGAG_V3 36697500-36699441 E
           EGN_Mt090430 20090702
          Length = 185

 Score =  213 bits (541), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 108/168 (64%), Positives = 126/168 (75%), Gaps = 20/168 (11%)

Query: 8   GGFGTHLMPLTVTVPRALVEFANKPIILYQ--------IEALKGVGVSEVVLAINYKQEV 59
           GGFGT L PLT+  P+ LV+FANKP+IL+Q        IEALK  GV+EVVLAINY+ E 
Sbjct: 19  GGFGTRLRPLTLNFPKPLVDFANKPMILHQLKLFKTIFIEALKATGVTEVVLAINYQPE- 77

Query: 60  ILEFLKEHEKKLGIKITCSQETKPLGTAGSLALAKDKLIDGTGEPFFVLNSDVISEYPLM 119
                      LGIKI+CSQET+PLGTAG LALA+DKLID +GEPFFVLNSDVI EYPL 
Sbjct: 78  -----------LGIKISCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVICEYPLK 126

Query: 120 EMIEFHKGHGGQASIMVTEVIDPSKYGVVVIREATGMVQEFAEKPSTF 167
           +MIEFHK HGG+ASIMVT+V +PSKYGV V+ E  G V++F EKP T 
Sbjct: 127 QMIEFHKSHGGEASIMVTKVDEPSKYGVAVLEETAGQVEKFVEKPKTL 174


>IMGA|Medtr8g148380.1 Trimeric LpxA-like
           chr08_pseudomolecule_IMGAG_V3 36699443-36700457 E
           EGN_Mt090430 20090702
          Length = 173

 Score =  203 bits (516), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/145 (64%), Positives = 116/145 (80%)

Query: 211 MSLPGFWMDIGQPRDYIAGQRLYLQFLQQNSSAKLATGPKIVGNVLIDESAVIEDGSLIG 270
           M LPGFWMDIGQPRDYI G RLYL  L+  SS+KLA+G  IVGNV++DE+A I +G LIG
Sbjct: 1   MLLPGFWMDIGQPRDYITGLRLYLDSLRNRSSSKLASGSNIVGNVIVDETAKISEGCLIG 60

Query: 271 PNVVIGPDCKIESGVSLSFCTLLRGVHIKKDAFICSSIMGWNSSVGRGARLQNMTILGEK 330
           P+V IGPDC +E GV LS CT++RGV IKK A I  SI+GW+SSVG+ AR++NMTILGE 
Sbjct: 61  PDVAIGPDCIVEPGVRLSRCTVMRGVRIKKHACISHSIIGWHSSVGQWARVENMTILGED 120

Query: 331 AKVCDEVFSNGAVLQPHEEMKSSIF 355
             VCDE++SNG V+ PH+E+KS+I 
Sbjct: 121 VHVCDEIYSNGGVVLPHKEIKSNIL 145


>IMGA|Medtr6g009470.1 Bacterial transferase hexapeptide repeat
           chr06_pseudomolecule_IMGAG_V3 1575532-1581903 E
           EGN_Mt090430 20090702
          Length = 417

 Score =  168 bits (426), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 194/403 (48%), Gaps = 51/403 (12%)

Query: 3   ALILAGG--FGTHLMPLTVTVPRALVEFANKPIILYQIEALKGV-GVSEVVLAINYKQEV 59
           A+I+ GG   GT   PL+   P+ L   A +P++ + I A K +  ++++ L   +++  
Sbjct: 9   AVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFHEERE 68

Query: 60  ILEFLKEHEKKLGIKITCSQETKPLGTAGSLALAKDKLIDGTGEPFFVLNSDVISEYPLM 119
              ++     +L + +   +E KP G+AG L   +D +++ +    F+LN DV   +PL 
Sbjct: 69  FALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDSPSHIFLLNCDVCCSFPLP 128

Query: 120 EMIEFHKGHGGQASIMVTEVIDPS--KYGVVVIREATGMVQEFAEKPSTFSRNKINAGIY 177
            M++ H  +GG  +++V +V   S  ++G +V    T  +  + EKP TF  + IN G+Y
Sbjct: 129 SMLDAHIKYGGMGTMLVIKVSAESANQFGELVADPETHELLHYTEKPETFVSDLINCGVY 188

Query: 178 LLNPSILDQIE---------------------LKATSIEKEVFPRIAED--------KKL 208
           +  P I   IE                       AT    + F R+ +D        KKL
Sbjct: 189 IFTPDIFAAIEDVSINREGRGNLRRLSSFEALQSATRTLPKDFVRLDQDILSPLAGKKKL 248

Query: 209 FAMSLPGFWMDIGQPRDYIAGQRLYLQFLQQNSSAKLATG-----PKIVGNVLIDESAVI 263
           +      FW  I  P   +    LYL   +  S   LA+G      KIVG+V I  SA +
Sbjct: 249 YTYETNDFWEQIKTPGLSLKCSELYLAQFRYTSPHLLASGDGKKNAKIVGDVYIHPSAKV 308

Query: 264 EDGSLIGPNVVIGPDCKIESGVSLSFCTLLRGVHIKKDAFICSSIMGWNSSVGRGARLQ- 322
              + IGPNV I  + ++ +GV L  C +L  V +K++A + +SI+GW SS+GR +R+Q 
Sbjct: 309 HPSAKIGPNVSISANVRVGAGVRLIGCIVLDDVEVKENAVVINSIVGWKSSLGRWSRVQA 368

Query: 323 -----------NMTILGEKAKVCDEVFSNGAVLQPHEEMKSSI 354
                       +TILGE   V DEV    +++ PH+ +  S+
Sbjct: 369 SLADGDYSAKLGITILGEAVTVEDEVVVINSIVLPHKILNVSV 411


>IMGA|Medtr4g097110.1 Trimeric LpxA-like
           chr04_pseudomolecule_IMGAG_V3 20656385-20660478 E
           EGN_Mt090430 20090702
          Length = 223

 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 95/224 (42%), Gaps = 54/224 (24%)

Query: 172 INAGIYLLNPSILDQIE---------------------LKATSIEKEVFPRIAED----- 205
           IN G+Y+  P I   IE                       AT    + F R+ +D     
Sbjct: 7   INCGVYIFTPDIFAAIEDVSINREGRGNLRRLSSFEALQSATRTLPKDFVRLDQDILSPL 66

Query: 206 ---KKLFAMSLPGFWMDIGQPRDYIAGQRLYLQFLQQNSSAKLATGPKIVGNVLIDESAV 262
              KKL+      FW  I  P   +    LYL   +  S   LA+G              
Sbjct: 67  AGKKKLYTYETNDFWEQIKTPGLSLKCSELYLAQFRYTSPHLLASGD------------- 113

Query: 263 IEDGSLIGPNVVIGPDCKIESGVSLSFCTLLRGVHIKKDAFICSSIMGWNSSVGRGARLQ 322
           +   + IGPNV I  + ++ +GV L  C +L  V +K++A + +SI+GW SS+GR +R+Q
Sbjct: 114 VHPSAKIGPNVSISANVRVGAGVRLIGCIVLDDVEVKENAVVINSIVGWKSSLGRWSRVQ 173

Query: 323 ------------NMTILGEKAKVCDEVFSNGAVLQPHEEMKSSI 354
                        +TILGE   V DEV    +++ PH+ +  S+
Sbjct: 174 ASLADGDYSAKLGITILGEAVTVEDEVVVINSIVLPHKILNVSV 217