Jatropha Genome Database

JcCA0149501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149501.10 - phase: 0 /pseudo/partial
         (833 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g025160.1 2-oxoglutarate dehydrogenase, E1 component ...   560   e-159

>IMGA|Medtr7g025160.1 2-oxoglutarate dehydrogenase, E1 component
           chr07_pseudomolecule_IMGAG_V3 6058895-6053003 E
           EGN_Mt090430 20090702
          Length = 1023

 Score =  560 bits (1443), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 270/381 (70%), Positives = 311/381 (81%), Gaps = 9/381 (2%)

Query: 1   MAWFXXXXXXXXXXXXKTLSQ--TASY-ASRIQCLP-WRNRSFHSTIFR---AAAPNSQH 53
           MAWF            +T+SQ  ++SY  SR + LP    R FH+T+F+   A  P +  
Sbjct: 1   MAWFRAGASIAKNAIKRTISQNRSSSYLVSRSRILPSTHGRKFHTTVFKQQAAPVPRAVP 60

Query: 54  LAGLSDNFLDATSSVYLEELQKAWEVDPNNVDESWDNFFRNFVGQNQKVPSAGVSGQTIQ 113
           L+ L+D+FLD TSSVYLEELQ+AWE DPN+VDESWDNFFRNFVGQ    P  G+SGQTIQ
Sbjct: 61  LSRLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQASTSP--GISGQTIQ 118

Query: 114 ESMSLLLLVRAYQVNGHMKAKLDPLDLEEREIPDELDPSFHGFTEADLDREFFLGVWKMS 173
           ESM LLL+VRAYQVNGHMKAKLDPL+LE R+IPD+LDP+ +GF+EADLDREFFLGVW+M+
Sbjct: 119 ESMRLLLMVRAYQVNGHMKAKLDPLNLEARQIPDDLDPALYGFSEADLDREFFLGVWRMA 178

Query: 174 GFLSDNRPVMTLRSILTRLEQAYCGHVGYEYMHIDDSAKCNWLRHKIETPVPMTYNQDRL 233
           GFLS+NRPV TLRSILTRLEQAYCG +G+EYMHI D  KCNWLR KIETP P+ +N++R 
Sbjct: 179 GFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHISDREKCNWLRDKIETPTPVQFNRERR 238

Query: 234 ELLLDRLTWSTQFENFLATKMKAAKRFGLEGGETLIPGMKEMFDRASDLGVENIVVGMPH 293
           E + DRL WS+ FENFLATK  +AKRFGLEGGETLIPGMKEMFDRASDLGVE+IV+GM H
Sbjct: 239 EAIFDRLAWSSLFENFLATKWTSAKRFGLEGGETLIPGMKEMFDRASDLGVESIVIGMAH 298

Query: 294 RGRLNVLGNVFRKPLAQIFSEFDKNAKVGDEIGVYSGTGDVKYHLGTSYDRPTRAGKRIH 353
           RGRLNVLGNV RKPL QIF EF       DE+G+Y+GTGDVKYHLGTSYDRPTR GKRIH
Sbjct: 299 RGRLNVLGNVVRKPLRQIFCEFSGGLSPEDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIH 358

Query: 354 LSLVANPSHLEAVDPLVLGKT 374
           LSLVANPSHLEAVDP+V+GKT
Sbjct: 359 LSLVANPSHLEAVDPVVVGKT 379



 Score =  556 bits (1432), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 250/320 (78%), Positives = 291/320 (90%)

Query: 514 SLEIYQNKLLESGKITQEDIDRIHKKVNAILNEEYSNSKDYVSKRSDWLSSHWAGFKSPE 573
           +LEIYQ KLLE+G++TQ+DID+IHKKV +ILNEE+  SKDY+ KR DWLS++W GFKSPE
Sbjct: 527 TLEIYQKKLLETGELTQDDIDKIHKKVTSILNEEFQASKDYIPKRRDWLSAYWLGFKSPE 586

Query: 574 QLSRIRNTGVKPDILKEVGKAITFLPDDLKPHKQVKKIYSDRAQMIETGEGIDWALAEAL 633
           QLSR+RNTGVKP+ILK VGKAIT +P++  PHK VK+IY  RAQMIETGE IDW   EAL
Sbjct: 587 QLSRVRNTGVKPEILKTVGKAITTIPENFTPHKAVKRIYEQRAQMIETGEDIDWGFGEAL 646

Query: 634 AFGTLLLEGNHVRLSGQDVERGTFSHRHAMVHDQESGKKYCPLDHVMVDQDEEMFTVSNS 693
           AF TLL+EGNHVRLSGQDVERGTFSHRH++VHDQ +G+KYCPLD+V+++QDEEMFTVSNS
Sbjct: 647 AFATLLVEGNHVRLSGQDVERGTFSHRHSVVHDQTTGEKYCPLDNVILNQDEEMFTVSNS 706

Query: 694 SLSEFGVLGFELGYSMENPNALVMWEAQFGDFSNGAQVMFDQFLSGGESKWLRQSGLVVL 753
           SLSEF VLGFELGYSMENPN+L++WEAQFGDF+NGA V+FD FL+ GE+KWLRQ+GLVVL
Sbjct: 707 SLSEFAVLGFELGYSMENPNSLIIWEAQFGDFANGAHVIFDNFLASGEAKWLRQTGLVVL 766

Query: 754 LPHGYDGQGPEHSSARLERFLQMNDSNPYVVPEMDSLVRKQIQECNWQVVNVTTPANYFH 813
           LPHGYDGQGPEHSSARLERFLQM D NPY++PEMD  +RKQIQECN Q+VNVTTPAN+FH
Sbjct: 767 LPHGYDGQGPEHSSARLERFLQMADDNPYIIPEMDPTLRKQIQECNLQIVNVTTPANFFH 826

Query: 814 VLRRQVHREFRKPLVVMSPK 833
           VLRRQ+HREFRKPL+VMSPK
Sbjct: 827 VLRRQIHREFRKPLIVMSPK 846