Jatropha Genome Database

JcCA0149451.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149451.20 + phase: 0 /partial
         (430 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g134940.1 Aminotransferase, class V; chr07_pseudomole...   649   0.0  
IMGA|Medtr1g105840.1 Aminotransferase, class V; chr01_pseudomole...   539   e-153
IMGA|Medtr3g105250.1 Aminotransferase, class V; chr03_pseudomole...    49   5e-06

>IMGA|Medtr7g134940.1 Aminotransferase, class V;
           chr07_pseudomolecule_IMGAG_V3 31988116-31995241 E
           EGN_Mt090430 20090702
          Length = 464

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/430 (73%), Positives = 359/430 (83%), Gaps = 7/430 (1%)

Query: 3   NHNHKVHTLNGDRCNSTTIVTKKPKLSSPIH-ITDSEIQSEFSHHDPDVARINNGSFGSC 61
           NH+  +  +NG     T    KKPKLSS  + IT SEIQSEFSHHD  V+RINNGSFGSC
Sbjct: 7   NHHRSIPDING-----THPTPKKPKLSSSSNFITASEIQSEFSHHDSAVSRINNGSFGSC 61

Query: 62  PQSVISAQRSLQLLFLRQPDEFYFNHLKPGILRSRSIVKSLINADHVDEVSLVDNATTAA 121
           P S++SAQ+  QL +LRQPD FYFNHLKP I  SRSI+++L+NA  ++E+S+VDNATTAA
Sbjct: 62  PSSILSAQQQWQLKYLRQPDHFYFNHLKPAINNSRSIIQNLVNAKDINEISIVDNATTAA 121

Query: 122 AIVLQKIARDFSEGRFNKGDGVVMLHYAYGSVKKSVEAYVKRAGGHVIEVQLPFPVKSRE 181
           AIVLQ  A  F EG+FNKGD VVMLHYAYG+VKKS+EAYV RAGG VIEV LPFPV S +
Sbjct: 122 AIVLQHTAWCFREGKFNKGDVVVMLHYAYGAVKKSMEAYVTRAGGKVIEVPLPFPVSSND 181

Query: 182 EIVTEFRKALERGKENGRKVRLAVIDHVTSMPSVVIPVKDLVKICREEFVDQVFVDAAHG 241
           EIVTEFRKALE+GK +G+K+RLAVIDHVTSMP VVIPVK+L++ICREE V+QVFVDAAH 
Sbjct: 182 EIVTEFRKALEKGKVDGKKIRLAVIDHVTSMPCVVIPVKELIQICREEGVEQVFVDAAHS 241

Query: 242 IGCVDVDMKEIGADFYTSNLHKWFFCPASVAFLYCRKW-SNKGDDDLHHPVVSYEYGNGL 300
           IGC DVDM++IGADFYTSNLHKWFFCP S+AFLY +K     G  DLHHPVVS+EYGNGL
Sbjct: 242 IGCTDVDMQDIGADFYTSNLHKWFFCPPSIAFLYTKKNPKTGGGGDLHHPVVSHEYGNGL 301

Query: 301 AMESAWIGNRDYSAQLVVPSVLEFINRFPGGIEEIKKRNHERVVDMGEMLVKAWGTHLGC 360
           A+ESAWIG RDYSAQLVVP  LEF+NRF GGIE IKKRNHE V++MGEMLVKAWGTHLG 
Sbjct: 302 AVESAWIGTRDYSAQLVVPEALEFVNRFEGGIEGIKKRNHEAVIEMGEMLVKAWGTHLGS 361

Query: 361 PPEMCGSMIMVGLPACLGILSESDALNLRTHLRDKFGIEVPIYFRDPKDGEVSPITGYAR 420
           P  MC SM+MVGLP C G+ S+SDAL LRTHLRD FG+EVPIY+R P+DGEV P+TGYAR
Sbjct: 362 PKHMCASMVMVGLPTCFGVRSDSDALTLRTHLRDVFGVEVPIYYRPPRDGEVDPVTGYAR 421

Query: 421 ISYQVYNKVE 430
           ISYQVYNKVE
Sbjct: 422 ISYQVYNKVE 431


>IMGA|Medtr1g105840.1 Aminotransferase, class V;
           chr01_pseudomolecule_IMGAG_V3 21912173-21913552 E
           EGN_Mt090430 20090702
          Length = 450

 Score =  539 bits (1388), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 260/414 (62%), Positives = 326/414 (78%), Gaps = 10/414 (2%)

Query: 23  TKKPKLSSPIHITDSEIQSEFSHHDPDVARINNGSFGSCPQSVISAQRSLQLLFLRQPDE 82
           +KKPKL+ PI  +  E+  EFSHH   VARINNGSFGSCP+S+++AQ + QL FL+QPD+
Sbjct: 16  SKKPKLTHPI--SSHELLHEFSHHQTAVARINNGSFGSCPRSILTAQTTWQLRFLQQPDD 73

Query: 83  FYFNHLKPGILRSRSIVKSLINADHVDEVSLVDNATTAAAIVLQKIARDFSEGRFNKGDG 142
           F+FN L+ GIL SR I+K+LINAD V+E+SL+DNATTAAAIVLQ+I   FS G+F + D 
Sbjct: 74  FFFNTLRNGILDSRKIIKNLINADDVEEISLIDNATTAAAIVLQQIGHHFSSGKFCRNDT 133

Query: 143 VVMLHYAYGSVKKSVEAYVKRAGGHVIEVQLPFPVKSREEIVTEFRKALERGKENGRKVR 202
           V++ H AY +VKKS+EAYV   GG VIEV+LPFPV S EEI+ EF+K +ERGK NG +VR
Sbjct: 134 VIIFHCAYQAVKKSIEAYVIPVGGSVIEVELPFPVNSNEEIIAEFKKGIERGKINGGRVR 193

Query: 203 LAVIDHVTSMPSVVIPVKDLVKICREEFVDQVFVDAAHGIGCVDVDMKEIGADFYTSNLH 262
           LA+IDH+TSMPSVVIPV++L+++CRE  VDQVFVD AH +G ++VD+KEIGADFY SNL+
Sbjct: 194 LAIIDHITSMPSVVIPVRELIRVCRENEVDQVFVDGAHALGSMEVDVKEIGADFYVSNLY 253

Query: 263 KWFFCPASVAFLYCRKWSNKGDDDLHHPVVSYEYGNGLAMESAWIGNRDYSAQLVVPSVL 322
           KWFF P SVAF+YC K  NK  +D+HHPVV++EYGNGL  ESAW+G RDYS QLVVPS++
Sbjct: 254 KWFFSPPSVAFMYCNK--NKKLNDVHHPVVAHEYGNGLPAESAWVGMRDYSPQLVVPSIM 311

Query: 323 EFINRFPGGIEEIKKRNHERVVDMGEMLVKAWGTHLGCPPEMCGSMIMVGLPACLGILSE 382
           EF+NRF GGIE I KRNH  VV MG ML +AWGT+LG PPEMC SMIM+GLP+ + ++S+
Sbjct: 312 EFVNRFEGGIEGIMKRNHNMVVKMGVMLKEAWGTNLGSPPEMCASMIMIGLPSKIRVMSD 371

Query: 383 SDALNLRTHLRDKFGIEVPIYFRDPKDGEVSP------ITGYARISYQVYNKVE 430
            DAL LR +LR    IEVP+Y++   +GE         ITGY RIS+QVYN V+
Sbjct: 372 DDALRLRFYLRVYHAIEVPVYYQALGNGERDARDKDGFITGYVRISHQVYNIVD 425


>IMGA|Medtr3g105250.1 Aminotransferase, class V;
           chr03_pseudomolecule_IMGAG_V3 26286489-26280241 E
           EGN_Mt090430 20090702
          Length = 500

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/281 (20%), Positives = 116/281 (41%), Gaps = 45/281 (16%)

Query: 15  RCNSTTIVTKKPKLSSPIHITDSEIQSEFSHHDPDVAR---INNGSFGSCPQSVISA--- 68
           R ++      +P LSSP     +       H + + ++   I+N +    P +V+ A   
Sbjct: 38  RASTVNQEVAEPTLSSPSLGHTTRPHFPILHQEVNGSKLVYIDNAATSQKPAAVVKALQD 97

Query: 69  ---------QRSLQLLFLRQPDEFYFNHLKPGILRSRSIVKSLINADHVDEVSLVDNATT 119
                     R +  L  +  DE+           +R  V + INA    E+    NAT 
Sbjct: 98  YYEGYNSNVHRGIHYLSAKATDEYE---------SARRKVAAFINASDSREIVFTRNATE 148

Query: 120 AAAIVLQKIARDFSEGRFNKGDGVVMLHYAYGSVKKSVEAYVKRAGGHVIEVQLPFPVKS 179
           A    +  +A  +      +GD +V+    + S     +   ++ G       L F   +
Sbjct: 149 A----INLVAYSWGLSNLKQGDEIVLTVAEHHSAIVPWQLVAQKVGA-----VLKFVNLN 199

Query: 180 REEI--VTEFRKALERGKENGRKVRLAVIDHVTSMPSVVIPVKDLVKICREEFVDQVFVD 237
           ++EI  + + ++ L +      K ++  + HV+++ + V+P++D+          +V VD
Sbjct: 200 QDEIPDIDKLKEVLSK------KTKIVAVHHVSNVLASVLPIRDIAHWA-HGVGAKVLVD 252

Query: 238 AAHGIGCVDVDMKEIGADFYTSNLHKWFFC-PASVAFLYCR 277
           A   +  + VD++ + ADF  ++ HK   C P  + FLY +
Sbjct: 253 ACQSVPHMVVDVQNLDADFLVASSHK--MCGPTGIGFLYGK 291