Jatropha Genome Database

JcCA0149451.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149451.10 - phase: 0 /TE/pseudo/partial
         (207 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g134920.1 Peptidase A1, pepsin chr07_pseudomolecule_I...   239   8e-64
IMGA|Medtr7g134920.3 Peptidase A1, pepsin chr07_pseudomolecule_I...   225   1e-59
IMGA|Medtr7g134920.2 Peptidase A1, pepsin chr07_pseudomolecule_I...   224   2e-59
IMGA|Medtr8g147120.1 Actin-binding, actinin-type; Saposin B subd...   207   3e-54
IMGA|Medtr2g052870.1 Peptidase A1, pepsin chr02_pseudomolecule_I...   203   5e-53

>IMGA|Medtr7g134920.1 Peptidase A1, pepsin
           chr07_pseudomolecule_IMGAG_V3 31982821-31978431 E
           EGN_Mt090430 20090702
          Length = 504

 Score =  239 bits (609), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 125/202 (61%), Positives = 151/202 (74%), Gaps = 5/202 (2%)

Query: 8   VAFCLWASAWLLLPAGSDGLMRISLKKRRLDVDSIKAARIAREEGKSRIGANNML--RSS 65
           V FCL A    LLP+ S G+MRI L+KR LD+ ++ A ++ RE+ + R G   ML  +SS
Sbjct: 8   VVFCLLAFTCSLLPSFSFGMMRIGLQKRPLDLHNMDAFKMVREQ-QLRSGRPMMLAHKSS 66

Query: 66  DIHIVPLKNYLDAQYYGEIGIGSPPQNFTVIFDTGSSNLWIPSSKCYFSLACYFHSRYKS 125
           D  IVPLKNY+DAQY+GEI IG+PPQ FTVIFDTGSSNLW+PSSKCYFSLACY H+ YK+
Sbjct: 67  DDAIVPLKNYMDAQYFGEIAIGTPPQTFTVIFDTGSSNLWVPSSKCYFSLACYTHNWYKA 126

Query: 126 SRSKTYVQNGTSCEIQYGSGSIAGFFSQDNVLVGDLIVKDQVFIEATREGSLSFILD*NL 185
            +SKTY +NGTSC+I YG+GSI+G+FSQDNV VG  +VK Q FIEATREGSLSF+     
Sbjct: 127 KKSKTYNKNGTSCKISYGTGSISGYFSQDNVKVGSSVVKHQDFIEATREGSLSFLAG-KF 185

Query: 186 TGILGLGFQEYRRLGMLFLVWY 207
            GI GLGFQE   +     VWY
Sbjct: 186 DGIFGLGFQEI-SVERALPVWY 206


>IMGA|Medtr7g134920.3 Peptidase A1, pepsin
           chr07_pseudomolecule_IMGAG_V3 31982821-31978431 E
           EGN_Mt090430 20090702
          Length = 426

 Score =  225 bits (573), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 115/183 (62%), Positives = 140/183 (76%), Gaps = 5/183 (2%)

Query: 27  LMRISLKKRRLDVDSIKAARIAREEGKSRIGANNML--RSSDIHIVPLKNYLDAQYYGEI 84
           +MRI L+KR LD+ ++ A ++ RE+ + R G   ML  +SSD  IVPLKNY+DAQY+GEI
Sbjct: 1   MMRIGLQKRPLDLHNMDAFKMVREQ-QLRSGRPMMLAHKSSDDAIVPLKNYMDAQYFGEI 59

Query: 85  GIGSPPQNFTVIFDTGSSNLWIPSSKCYFSLACYFHSRYKSSRSKTYVQNGTSCEIQYGS 144
            IG+PPQ FTVIFDTGSSNLW+PSSKCYFSLACY H+ YK+ +SKTY +NGTSC+I YG+
Sbjct: 60  AIGTPPQTFTVIFDTGSSNLWVPSSKCYFSLACYTHNWYKAKKSKTYNKNGTSCKISYGT 119

Query: 145 GSIAGFFSQDNVLVGDLIVKDQVFIEATREGSLSFILD*NLTGILGLGFQEYRRLGMLFL 204
           GSI+G+FSQDNV VG  +VK Q FIEATREGSLSF+      GI GLGFQE   +     
Sbjct: 120 GSISGYFSQDNVKVGSSVVKHQDFIEATREGSLSFLAG-KFDGIFGLGFQEI-SVERALP 177

Query: 205 VWY 207
           VWY
Sbjct: 178 VWY 180


>IMGA|Medtr7g134920.2 Peptidase A1, pepsin
           chr07_pseudomolecule_IMGAG_V3 31982821-31978431 E
           EGN_Mt090430 20090702
          Length = 478

 Score =  224 bits (571), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 115/183 (62%), Positives = 140/183 (76%), Gaps = 5/183 (2%)

Query: 27  LMRISLKKRRLDVDSIKAARIAREEGKSRIGANNML--RSSDIHIVPLKNYLDAQYYGEI 84
           +MRI L+KR LD+ ++ A ++ RE+ + R G   ML  +SSD  IVPLKNY+DAQY+GEI
Sbjct: 1   MMRIGLQKRPLDLHNMDAFKMVREQ-QLRSGRPMMLAHKSSDDAIVPLKNYMDAQYFGEI 59

Query: 85  GIGSPPQNFTVIFDTGSSNLWIPSSKCYFSLACYFHSRYKSSRSKTYVQNGTSCEIQYGS 144
            IG+PPQ FTVIFDTGSSNLW+PSSKCYFSLACY H+ YK+ +SKTY +NGTSC+I YG+
Sbjct: 60  AIGTPPQTFTVIFDTGSSNLWVPSSKCYFSLACYTHNWYKAKKSKTYNKNGTSCKISYGT 119

Query: 145 GSIAGFFSQDNVLVGDLIVKDQVFIEATREGSLSFILD*NLTGILGLGFQEYRRLGMLFL 204
           GSI+G+FSQDNV VG  +VK Q FIEATREGSLSF+      GI GLGFQE   +     
Sbjct: 120 GSISGYFSQDNVKVGSSVVKHQDFIEATREGSLSFLAG-KFDGIFGLGFQEI-SVERALP 177

Query: 205 VWY 207
           VWY
Sbjct: 178 VWY 180


>IMGA|Medtr8g147120.1 Actin-binding, actinin-type; Saposin B
           subdomain chr08_pseudomolecule_IMGAG_V3
           36132337-36129314 E EGN_Mt090430 20090702
          Length = 469

 Score =  207 bits (527), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/223 (51%), Positives = 148/223 (66%), Gaps = 18/223 (8%)

Query: 1   MRNRILSVAFCLWASAWLLLPAGS-----DGLMRISLKKRRLDVDSIKAARIAREEGKSR 55
           M N++  +  CL  S  L+          DGL RI+LKK +LD ++  AA  A   G  R
Sbjct: 1   MGNKLHVIVLCLLVSTLLISAVSIAASSSDGLRRIALKKIQLDRNNKLAAAAAAAAGGRR 60

Query: 56  IGANNMLRSS-----------DIHIVPLKNYLDAQYYGEIGIGSPPQNFTVIFDTGSSNL 104
               + L+SS           +  IV LKNYLDAQYYGEI IG+ PQ FTVIFDTGSSNL
Sbjct: 61  TKDTDSLQSSIRKYNLANNYQETDIVALKNYLDAQYYGEISIGTSPQKFTVIFDTGSSNL 120

Query: 105 WIPSSKCYFSLACYFHSRYKSSRSKTYVQNGTSCEIQYGSGSIAGFFSQDNVLVGDLIVK 164
           W+PSSKC FS+ACYFH++YKS++S TY +NGT+  IQYG+G+I+GFFS D+V VGD++VK
Sbjct: 121 WVPSSKCTFSVACYFHAKYKSTKSTTYRKNGTAAAIQYGTGAISGFFSYDSVKVGDIVVK 180

Query: 165 DQVFIEATREGSLSFILD*NLTGILGLGFQEYRRLGMLFLVWY 207
           +Q FIEAT+E  ++F++     GILGLGFQE   +G    VWY
Sbjct: 181 NQEFIEATKEPGVTFLVA-KFDGILGLGFQEI-SVGNAVPVWY 221


>IMGA|Medtr2g052870.1 Peptidase A1, pepsin
           chr02_pseudomolecule_IMGAG_V3 14420011-14416185 E
           EGN_Mt090430 20090702
          Length = 507

 Score =  203 bits (516), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 111/208 (53%), Positives = 137/208 (65%), Gaps = 4/208 (1%)

Query: 1   MRNRILSVAFCLWA-SAWLLLPAGSDGLMRISLKKRRLDVDSIKAARIAREEGKSRIGAN 59
           M  + + V  CLW  S  L     +D LMRISLKKR LD+ S+  +RI +   +  + + 
Sbjct: 1   MSLKYMLVVTCLWIWSLSLAYTISNDNLMRISLKKRNLDIQSLNTSRIKKVIHERDLESV 60

Query: 60  NMLRSSDIHIVPLKNYLDAQYYGEIGIGSPPQNFTVIFDTGSSNLWIPSSKCYFSLACYF 119
           +    S   +V LKNY D QYYGEIGIGSPPQ F V+FDTGSSNLW+PSS+C FS+ACYF
Sbjct: 61  DTNYGSK-DVVYLKNYFDVQYYGEIGIGSPPQYFNVVFDTGSSNLWVPSSRCIFSIACYF 119

Query: 120 HSRYKSSRSKTYVQNGTSCEIQYGSGSIAGFFSQDNVLVGDLIVKDQVFIEATREGSLSF 179
           HS+Y+S  S TY + G  CEI Y  G I GFFSQDNV VGD+ VKDQ F E TREG+ + 
Sbjct: 120 HSKYRSGISSTYNEIGVPCEIPYDEGYIYGFFSQDNVKVGDINVKDQEFCEITREGNFA- 178

Query: 180 ILD*NLTGILGLGFQEYRRLGMLFLVWY 207
           +L     GILGLGFQ+   +G +  VWY
Sbjct: 179 LLALPFDGILGLGFQDV-SVGKVTPVWY 205