Jatropha Genome Database

JcCA0149411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149411.10 - phase: 0 /partial
         (246 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g132760.1 Aminoacyl-tRNA synthetase, class I; Bifunct...   406   e-114
IMGA|Medtr4g132760.2 Aminoacyl-tRNA synthetase, class I; Bifunct...   406   e-114
IMGA|Medtr4g132760.3 Aminoacyl-tRNA synthetase, class I; Bifunct...   406   e-114
IMGA|Medtr3g104620.1 Aspartate kinase region; Aminoacyl-tRNA syn...   391   e-109
IMGA|Medtr3g111270.1 Homoserine dehydrogenase chr03_pseudomolecu...   119   1e-27

>IMGA|Medtr4g132760.1 Aminoacyl-tRNA synthetase, class I;
           Bifunctional aspartokinase/homoserine dehydrogenase I
           chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
           EGN_Mt090430 20090702
          Length = 917

 Score =  406 bits (1043), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/255 (76%), Positives = 224/255 (87%), Gaps = 10/255 (3%)

Query: 1   AAVLKEEFNIDLRVMGIIGSRRMLLSEVGIDLSRWRELAMENSEVADLEKFTHHIRRNHF 60
           A++LKEEFNIDLRVMGIIGS+ MLLS+VGIDL++W+EL  E  EVA+LEKF  H+  N+F
Sbjct: 581 ASILKEEFNIDLRVMGIIGSKSMLLSDVGIDLAKWKELREERGEVANLEKFAQHVHGNNF 640

Query: 61  IPNTVLVDCTADSKIATCYYDWLRKGIHVITPNKKANSGPLDQYLKLRALQRQSYTHYFY 120
           IPNT LVDCTADS IA  YY+WL KGIHVITPNKKANSGPL+QYL+LRALQRQSYTHYFY
Sbjct: 641 IPNTALVDCTADSIIAGHYYEWLCKGIHVITPNKKANSGPLEQYLRLRALQRQSYTHYFY 700

Query: 121 EATVGAGLPIISTLRGLLETGDKILQIEGIFSGTLSYIFNNFIGPKSFSEVVAEAKQAGY 180
           EATVGAGLPI+STLRGLLETGDKILQIEGIFSGTLSYIFNNF   ++FSEVV EAK+AGY
Sbjct: 701 EATVGAGLPIVSTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGRAFSEVVGEAKEAGY 760

Query: 181 TEPDPRDDLSGTDVARKVIILARESGLKLELSDIP----------ACVSAEEYMKQLPQF 230
           TEPDPRDDLSGTDVARKVIILARESGLKLELS+IP          AC SA+E+M+QLP+F
Sbjct: 761 TEPDPRDDLSGTDVARKVIILARESGLKLELSNIPIESLVPEPLRACASAQEFMQQLPKF 820

Query: 231 DKDMAKERQKAEHSG 245
           D++ AK+++ A+++G
Sbjct: 821 DQEFAKKQEDADNAG 835


>IMGA|Medtr4g132760.2 Aminoacyl-tRNA synthetase, class I;
           Bifunctional aspartokinase/homoserine dehydrogenase I
           chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
           EGN_Mt090430 20090702
          Length = 916

 Score =  406 bits (1043), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/255 (76%), Positives = 224/255 (87%), Gaps = 10/255 (3%)

Query: 1   AAVLKEEFNIDLRVMGIIGSRRMLLSEVGIDLSRWRELAMENSEVADLEKFTHHIRRNHF 60
           A++LKEEFNIDLRVMGIIGS+ MLLS+VGIDL++W+EL  E  EVA+LEKF  H+  N+F
Sbjct: 580 ASILKEEFNIDLRVMGIIGSKSMLLSDVGIDLAKWKELREERGEVANLEKFAQHVHGNNF 639

Query: 61  IPNTVLVDCTADSKIATCYYDWLRKGIHVITPNKKANSGPLDQYLKLRALQRQSYTHYFY 120
           IPNT LVDCTADS IA  YY+WL KGIHVITPNKKANSGPL+QYL+LRALQRQSYTHYFY
Sbjct: 640 IPNTALVDCTADSIIAGHYYEWLCKGIHVITPNKKANSGPLEQYLRLRALQRQSYTHYFY 699

Query: 121 EATVGAGLPIISTLRGLLETGDKILQIEGIFSGTLSYIFNNFIGPKSFSEVVAEAKQAGY 180
           EATVGAGLPI+STLRGLLETGDKILQIEGIFSGTLSYIFNNF   ++FSEVV EAK+AGY
Sbjct: 700 EATVGAGLPIVSTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGRAFSEVVGEAKEAGY 759

Query: 181 TEPDPRDDLSGTDVARKVIILARESGLKLELSDIP----------ACVSAEEYMKQLPQF 230
           TEPDPRDDLSGTDVARKVIILARESGLKLELS+IP          AC SA+E+M+QLP+F
Sbjct: 760 TEPDPRDDLSGTDVARKVIILARESGLKLELSNIPIESLVPEPLRACASAQEFMQQLPKF 819

Query: 231 DKDMAKERQKAEHSG 245
           D++ AK+++ A+++G
Sbjct: 820 DQEFAKKQEDADNAG 834


>IMGA|Medtr4g132760.3 Aminoacyl-tRNA synthetase, class I;
           Bifunctional aspartokinase/homoserine dehydrogenase I
           chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
           EGN_Mt090430 20090702
          Length = 909

 Score =  406 bits (1043), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/255 (76%), Positives = 224/255 (87%), Gaps = 10/255 (3%)

Query: 1   AAVLKEEFNIDLRVMGIIGSRRMLLSEVGIDLSRWRELAMENSEVADLEKFTHHIRRNHF 60
           A++LKEEFNIDLRVMGIIGS+ MLLS+VGIDL++W+EL  E  EVA+LEKF  H+  N+F
Sbjct: 573 ASILKEEFNIDLRVMGIIGSKSMLLSDVGIDLAKWKELREERGEVANLEKFAQHVHGNNF 632

Query: 61  IPNTVLVDCTADSKIATCYYDWLRKGIHVITPNKKANSGPLDQYLKLRALQRQSYTHYFY 120
           IPNT LVDCTADS IA  YY+WL KGIHVITPNKKANSGPL+QYL+LRALQRQSYTHYFY
Sbjct: 633 IPNTALVDCTADSIIAGHYYEWLCKGIHVITPNKKANSGPLEQYLRLRALQRQSYTHYFY 692

Query: 121 EATVGAGLPIISTLRGLLETGDKILQIEGIFSGTLSYIFNNFIGPKSFSEVVAEAKQAGY 180
           EATVGAGLPI+STLRGLLETGDKILQIEGIFSGTLSYIFNNF   ++FSEVV EAK+AGY
Sbjct: 693 EATVGAGLPIVSTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGRAFSEVVGEAKEAGY 752

Query: 181 TEPDPRDDLSGTDVARKVIILARESGLKLELSDIP----------ACVSAEEYMKQLPQF 230
           TEPDPRDDLSGTDVARKVIILARESGLKLELS+IP          AC SA+E+M+QLP+F
Sbjct: 753 TEPDPRDDLSGTDVARKVIILARESGLKLELSNIPIESLVPEPLRACASAQEFMQQLPKF 812

Query: 231 DKDMAKERQKAEHSG 245
           D++ AK+++ A+++G
Sbjct: 813 DQEFAKKQEDADNAG 827


>IMGA|Medtr3g104620.1 Aspartate kinase region; Aminoacyl-tRNA
           synthetase, class I chr03_pseudomolecule_IMGAG_V3
           26062388-26055010 E EGN_Mt090430 20090702
          Length = 906

 Score =  391 bits (1004), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/255 (74%), Positives = 215/255 (84%), Gaps = 10/255 (3%)

Query: 1   AAVLKEEFNIDLRVMGIIGSRRMLLSEVGIDLSRWRELAMENSEVADLEKFTHHIRRNHF 60
           AA LKEE NIDLRVMGI+GS+ MLL ++GIDL +WRE+  E  EVADLEKF  H+  NH 
Sbjct: 570 AATLKEESNIDLRVMGIMGSKSMLLDDLGIDLVKWREIREEKGEVADLEKFVQHVHGNHV 629

Query: 61  IPNTVLVDCTADSKIATCYYDWLRKGIHVITPNKKANSGPLDQYLKLRALQRQSYTHYFY 120
           IPNTVLVDCTADS IA+ Y DWLRKGIHVITPNKKANSGPL +YL+LRALQRQSYTHYFY
Sbjct: 630 IPNTVLVDCTADSVIASHYDDWLRKGIHVITPNKKANSGPLSEYLRLRALQRQSYTHYFY 689

Query: 121 EATVGAGLPIISTLRGLLETGDKILQIEGIFSGTLSYIFNNFIGPKSFSEVVAEAKQAGY 180
           EATVGAGLPII TLRGLLETGDKILQIEGIFSGTLSYIFNNF   + FSEVVAEAK+AGY
Sbjct: 690 EATVGAGLPIIGTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGQVFSEVVAEAKEAGY 749

Query: 181 TEPDPRDDLSGTDVARKVIILARESGLKLELSDIP----------ACVSAEEYMKQLPQF 230
           TEPDPRDDLSGTDVARKVIILARESGLKLELSDIP             S +E+M++LP+F
Sbjct: 750 TEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVENLVPEPLRVSASTQEFMQKLPKF 809

Query: 231 DKDMAKERQKAEHSG 245
           D++ +K+++ A+ +G
Sbjct: 810 DQEFSKKQEDADTAG 824


>IMGA|Medtr3g111270.1 Homoserine dehydrogenase
           chr03_pseudomolecule_IMGAG_V3 28220584-28225725 F
           EGN_Mt090430 20090702
          Length = 376

 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 120/234 (51%), Gaps = 21/234 (8%)

Query: 25  LSEVGIDLSRWRELAMENSEVADLEKFTHHIRRNHFIPNTVLVDCTADSKIATCYYDWLR 84
           LS++G DL + +      SE   LE  +   ++         VDCTA S         + 
Sbjct: 76  LSKLG-DLGQCQVFVHPESEGKILEIASQLGKKTGL----AFVDCTASSDTIVVLKQVVD 130

Query: 85  KGIHVITPNKKANSGPLDQYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKI 144
            G  V+  NKK  +  +  + KL    R+      +E+TVGAGLP+IS+L  ++ +GD +
Sbjct: 131 LGCCVVMANKKPLTSTMGDFEKLLTYPRR----IRHESTVGAGLPVISSLNRIISSGDPV 186

Query: 145 LQIEGIFSGTLSYIFNNFIGPKSFSEVVAEAKQAGYTEPDPRDDLSGTDVARKVIILARE 204
            +I G  SGTL Y+ +     K  S+VV  AK  GYTEPDPRDDL G DVARK +ILAR 
Sbjct: 187 NRIIGSLSGTLGYVMSEVEDGKPLSQVVRAAKSLGYTEPDPRDDLGGMDVARKALILARI 246

Query: 205 SGLKLELSDI-----------PACVSAEEYMK-QLPQFDKDMAKERQKAEHSGN 246
            G ++ +  I           P  ++ ++++   L   DKD+ +  +KA  +GN
Sbjct: 247 LGRRINMDSIQIESLYPKEMGPDVMTDDDFLSCGLLLLDKDIQERVEKAASNGN 300