Jatropha Genome Database

JcCA0149151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149151.10 - phase: 2 /pseudo/partial
         (625 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233659_16.1 hypothetical protein AC233659.1 56005-69746 E...   893   0.0  
IMGA|Medtr2g014850.1 hypothetical protein chr02_pseudomolecule_I...   624   e-179
IMGA|Medtr2g014880.1 hypothetical protein chr02_pseudomolecule_I...   394   e-110
IMGA|Medtr1g086170.1 hypothetical protein chr01_pseudomolecule_I...   176   4e-44
IMGA|Medtr4g005410.1 hypothetical protein chr04_pseudomolecule_I...   148   7e-36
IMGA|Medtr4g005420.1 hypothetical protein chr04_pseudomolecule_I...   139   3e-33
IMGA|Medtr1g086160.1 hypothetical protein chr01_pseudomolecule_I...   105   5e-23

>IMGA|AC233659_16.1 hypothetical protein AC233659.1 56005-69746 E
           EGN_Mt090430 20090702
          Length = 1306

 Score =  893 bits (2308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/606 (74%), Positives = 493/606 (81%), Gaps = 47/606 (7%)

Query: 60  MEEDSMSPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPC 119
           MEEDS++PATVF IRL+Q ++NL HKMSVPELCRNFSAV+WCGKLNAIACA+ETCARIP 
Sbjct: 58  MEEDSVNPATVFTIRLRQSKANLMHKMSVPELCRNFSAVSWCGKLNAIACAAETCARIPS 117

Query: 120 SNANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRIT 179
           S ANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGR+T
Sbjct: 118 STANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRVT 177

Query: 180 IWTQPSQGAANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLXXXXXXXXXXXXXFE 239
           IWTQPSQG ANLVRDASCW+REHEWRQDIAV TKWLSGVSPYRWL             FE
Sbjct: 178 IWTQPSQGPANLVRDASCWRREHEWRQDIAVATKWLSGVSPYRWLSSKSSATPDSKLTFE 237

Query: 240 EKFLSQQSQT---------------SGSVQLHWSQWPPSQNNATPKWFSTSKGLLGAGPS 284
           EKFLSQQSQT               SGSVQLHWSQWPP+Q ++TP+WF TSKGLLG GPS
Sbjct: 238 EKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPNQKDSTPRWFHTSKGLLGCGPS 297

Query: 285 GIMAADAIVTDSGAMHVAGVPIVNPSTVVVWEVTPGPGPGFQAIAKTSTSNGVPPSLNPP 344
           GIMA DAI+TDSGAMHVAGVPIVNPST+VVWEVTPGPG GFQ+   TST +GVPP + PP
Sbjct: 298 GIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQSCPMTSTKSGVPPHI-PP 356

Query: 345 TWSGFAPLAAYLFSWQEYLISEAKHGKKQTDQDFSDAVSLHCSPVSNFSAYVSPEAAAQS 404
            W GFAPLAAYLF WQ++L+S AK GKK T+++  D+V L+CSPVSNFSAYVSPEAAAQS
Sbjct: 357 NWDGFAPLAAYLFCWQDHLLSLAKQGKKLTEKNIGDSVPLYCSPVSNFSAYVSPEAAAQS 416

Query: 405 AATTTWGSGVTAVAFDPTRGGSVIAVVIVEG----------------------------- 435
           AATTTWGSGVTAVAFDPTR GSVIAVVIVE                              
Sbjct: 417 AATTTWGSGVTAVAFDPTRAGSVIAVVIVEARCTKAPADAGFGKGSHHLVCCTQPYPVFY 476

Query: 436 --QYMSPYDPDEGPSITGWRVQRWESSLQPVVLHQIFGNPTSSFGGQAPMQTVWVSKVDT 493
             QYMSPYDPDEGP+ITGWRVQRWESSL+ VVLH IFGNPTSS GGQ PMQTVW SKVD 
Sbjct: 477 TRQYMSPYDPDEGPTITGWRVQRWESSLEQVVLHPIFGNPTSSMGGQPPMQTVWQSKVDL 536

Query: 494 SIHPTNDFKNHQAVAAGPTSDVRKTSDSGVEKAKSLTFDPFDLPSDVRSLARIVYSAHGG 553
           SI PT+DF+NH++   G  +DV+K S+   +K+K + FDPFDLPSDVR+LARIVYSAHGG
Sbjct: 537 SILPTDDFRNHRSPTIGMATDVQKVSELISDKSKRVNFDPFDLPSDVRTLARIVYSAHGG 596

Query: 554 EIAIAFLRGGVHIFSGPNFALVDSYQINVGSAIAAPAFSSTSCCSASVWHDASKDRTILK 613
           EIAIAFLRGGVHIFSGPNF  VD+YQI VGSAIAAPAFSSTSCCSASVWHD   + TILK
Sbjct: 597 EIAIAFLRGGVHIFSGPNFEQVDNYQITVGSAIAAPAFSSTSCCSASVWHDTINNYTILK 656

Query: 614 IIRVLP 619
           IIRVLP
Sbjct: 657 IIRVLP 662


>IMGA|Medtr2g014850.1 hypothetical protein
           chr02_pseudomolecule_IMGAG_V3 3926919-3918528 H
           EGN_Mt090430 20090702
          Length = 1171

 Score =  624 bits (1608), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 338/585 (57%), Positives = 390/585 (66%), Gaps = 75/585 (12%)

Query: 60  MEEDSMSPATVFCIRLKQPRSNLQHKMSVPELCR-NFSAVAWCGKLNAIACASETCAR-I 117
           MEE+ +   TVF I L+Q  S   HK++V E  R NFSAVAWC KLN IACA+ETC   I
Sbjct: 22  MEEEEVEAGTVFDISLEQSPSTSLHKITVHESMRSNFSAVAWCAKLNVIACATETCVNGI 81

Query: 118 PCSNANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGR 177
           P S+ NP FWIPIHIVIPERPTE A FNV+ADS  DSVQ I+WSP  CPRALLIANF GR
Sbjct: 82  PRSSVNPWFWIPIHIVIPERPTEIAAFNVVADSSLDSVQSIQWSPICCPRALLIANFQGR 141

Query: 178 ITIWTQPSQGAANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLXXXXXXXXXXXXX 237
           +TIWTQPS+G  NLV D +CWQREHEWRQ+ AVVTKWLSG SPYRWL             
Sbjct: 142 VTIWTQPSRGPPNLVIDTNCWQREHEWRQETAVVTKWLSGASPYRWLSSKASAPTDSKST 201

Query: 238 FEEKFLSQQSQT--------------------SGSVQLHWSQWPPSQNNATPKWFSTSKG 277
           F EKF+SQQ +T                    SG VQLHWSQ PP+QN   PKWF TSKG
Sbjct: 202 FVEKFISQQPETSVVLISARWPKFLCVCSVSQSGKVQLHWSQRPPTQNATPPKWFCTSKG 261

Query: 278 LLGAGPSGIMAADAIVTDSGAMHVAGVPIVNPSTVVVWEVTPGPGPGFQAIAKTSTSNGV 337
           L+  GPSGI+AADAI+TDSG +HVAGV   +P+TV+VW V PG G G +   KTS +   
Sbjct: 262 LIECGPSGIIAADAIITDSGMLHVAGVLAFSPATVIVWVVLPGQGNGLEFSPKTSITTSA 321

Query: 338 PPSLNPPTWSGFAPLAAYLFSWQEYLISEAKHGKKQTDQDFSDAVSLHCSPVSNFSAYVS 397
           P  L+PP W GFAPL A+LFSWQ+                   ++ LHCS VSNFSAYVS
Sbjct: 322 P--LSPPNWIGFAPLPAFLFSWQD------------------QSIPLHCSTVSNFSAYVS 361

Query: 398 PEAAAQSAATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRW 457
            EAA      +T   GV  VAFDPTRGGSVIA V+VEG+YMSP+DPDE  SITGWRVQRW
Sbjct: 362 SEAAP-----STQCCGVAGVAFDPTRGGSVIAAVVVEGKYMSPHDPDESLSITGWRVQRW 416

Query: 458 ESSLQPVVLHQIFGNPTSSFGGQAPMQTVWVSKVDTSIHPTNDFKNHQAVAAGPTSDVRK 517
           ESS QPVVL+ IFG    S  G  PM+TVW SKVD SI  T+D                 
Sbjct: 417 ESSFQPVVLNPIFG----SMDGNPPMRTVWESKVDISIPATDD----------------- 455

Query: 518 TSDSGVEKAKSLTFDPFDLPSDVRSLARIVYSAHGGEIAIAFLRGGVHIFSGPNFALVDS 577
                  K+K + F+PFDLP  + +LAR+V+SA GGEIA+AF +G V IFSG NF  V +
Sbjct: 456 -------KSKGIHFNPFDLPKYLGTLARVVFSAQGGEIAVAFFQGRVRIFSGSNFEPVTN 508

Query: 578 YQINVGSAIAAPAFSSTSCCSASVWHDASKDRTILKIIRVLPQLF 622
           Y+INVGS+I+ PAFS+TSCCSASVWHD SK   +LKIIRVLP  F
Sbjct: 509 YEINVGSSISVPAFSATSCCSASVWHDTSKGEAMLKIIRVLPPPF 553


>IMGA|Medtr2g014880.1 hypothetical protein
           chr02_pseudomolecule_IMGAG_V3 3938824-3934977 H
           EGN_Mt090430 20090702
          Length = 332

 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/377 (57%), Positives = 240/377 (63%), Gaps = 67/377 (17%)

Query: 63  DSMSPATVFCIRLKQPRSNLQHKMSVPE-LCRNFSAVAWCGKLNAIACASETCARIPCSN 121
           + +   TVF IRLKQ  S L HKM++ E + RNFSAVAWC KLNAIACA+ETCARIP S+
Sbjct: 19  EEVEAGTVFHIRLKQSPSTLLHKMNLHESMRRNFSAVAWCAKLNAIACATETCARIPRSS 78

Query: 122 ANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRITIW 181
            NPPFWIPIHIVIPERPTE AVFNV+ADSP DSVQFI+WSP  CPRALLIANFHGR+TIW
Sbjct: 79  VNPPFWIPIHIVIPERPTENAVFNVVADSPLDSVQFIQWSPVCCPRALLIANFHGRVTIW 138

Query: 182 TQPSQGAANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLXXXXXXXXXXXXXFEEK 241
           TQPS G ANLV D +CW REHEWRQD AVVTKWLSG+                       
Sbjct: 139 TQPSHGPANLVIDTNCWLREHEWRQDTAVVTKWLSGLD-------------------GPI 179

Query: 242 FLSQQSQTSGSVQLHWSQWPPSQNNATPKWFSTSKGLLGAGPSGIMAADAIVTDSGAMHV 301
           F       SGSVQLHWSQWPP+QN    KWF TSKGLL  GPSGI+  DAI+TD+G + V
Sbjct: 180 FCVCSVLQSGSVQLHWSQWPPTQNATLHKWFCTSKGLLACGPSGIITGDAIITDNGTLLV 239

Query: 302 AGVPIVNPSTVVVWEVTPGPGPGFQAIAKTSTSNGVPPSLNPPTWSGFAPLAAYLFSWQE 361
           AGVP VNP+ ++VWEV PG G   Q   K S +NGVPP L+ P W               
Sbjct: 240 AGVPAVNPAAIIVWEVMPGRGNSLQFSPKKSINNGVPP-LSAPNW--------------- 283

Query: 362 YLISEAKHGKKQTDQDFSDAVSLHCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDP 421
                                          SAYVSPE+A +S A TTW SGV   AFDP
Sbjct: 284 -------------------------------SAYVSPESAVKSPAPTTWCSGVAGAAFDP 312

Query: 422 TRGGSVIAVVIVEGQYM 438
           TR GSVIA VIVEG +M
Sbjct: 313 TRDGSVIAAVIVEGMHM 329


>IMGA|Medtr1g086170.1 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 16978756-16979286 H
           EGN_Mt090430 20090702
          Length = 176

 Score =  176 bits (445), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/192 (51%), Positives = 119/192 (61%), Gaps = 28/192 (14%)

Query: 431 VIVEGQYMSPYDPDEGPSITGWRVQRWESSLQPVVLHQIFGNPTSSFGGQAPMQTVWVSK 490
           +I   +YMS ++P EGPS+T WRVQRWESS Q VV+H IFG    SF G   +Q VW SK
Sbjct: 4   LIFAWKYMSHHNPYEGPSVTEWRVQRWESSSQHVVIHPIFG----SFHGNPDIQMVWESK 59

Query: 491 VDTSIHPTNDFKNHQAVAAGPTSDVRKTSDSGVEKAKSLTFDPFDLPSDVRSLARIVYSA 550
           VD SI  TND                        K+K + F+ F+   D+ +LAR+VYSA
Sbjct: 60  VDISIPATND------------------------KSKEIHFNRFNFLIDLGTLARVVYSA 95

Query: 551 HGGEIAIAFLRGGVHIFSGPNFALVDSYQINVGSAIAAPAFSSTSCCSASVWHDASKDRT 610
            GGEI +AFL GG+HIFSG  F  V +YQINVGS+IA   FS+TS CSAS WHD +K   
Sbjct: 96  QGGEIVVAFLYGGIHIFSGLTFTHVANYQINVGSSIAILVFSATSYCSASAWHDTNKGDP 155

Query: 611 ILKIIRVLPQLF 622
           +LKII VLP  F
Sbjct: 156 MLKIIWVLPPTF 167


>IMGA|Medtr4g005410.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 219782-221879 H
           EGN_Mt090430 20090702
          Length = 144

 Score =  148 bits (374), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 85/171 (49%), Positives = 98/171 (57%), Gaps = 31/171 (18%)

Query: 133 VIPERPTECAVFNVIADSPRDSV---QFIEWSPTSCPRALLIANFHGRITIWTQPSQGAA 189
           +IPERPTE    NV+A +    +     I+WSP  CPRALLIANF GR+TIW QPSQ   
Sbjct: 1   MIPERPTEIVAINVVAGTLMSWLFHYYCIQWSPVCCPRALLIANFQGRVTIWMQPSQ--- 57

Query: 190 NLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLXXXXXXXXXXXXXFEEKFLSQQS-Q 248
                     RE+EWRQD  VVTKWL G SP                     FL   S  
Sbjct: 58  ----------REYEWRQDTTVVTKWLLGASP--------------VCYKRPNFLCVCSVL 93

Query: 249 TSGSVQLHWSQWPPSQNNATPKWFSTSKGLLGAGPSGIMAADAIVTDSGAM 299
            SGSVQLHWS+ PP+QN   PKWF TSKGLL  GPSGI+A DAI+T +  +
Sbjct: 94  QSGSVQLHWSERPPTQNATRPKWFCTSKGLLDCGPSGIIAGDAIITKNRGL 144


>IMGA|Medtr4g005420.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 224656-221963 E
           EGN_Mt090430 20090702
          Length = 149

 Score =  139 bits (351), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 81/119 (68%), Gaps = 14/119 (11%)

Query: 116 RIPCSNANPPFWIPIHIVIPERPTECAVFNVIADSPRD----SVQFIEWSPTSCPRALLI 171
           +I  S+ NP FWIPI IVIPERPTE A FNV+A +       +   I+WSP  CPRALLI
Sbjct: 4   KIQISSVNPRFWIPIQIVIPERPTEIAAFNVVAGTLMSWLFHNYCSIQWSPVCCPRALLI 63

Query: 172 ANFHGRITIWTQPSQ----------GAANLVRDASCWQREHEWRQDIAVVTKWLSGVSP 220
           ANF GR+TIWTQPSQ          G  N+V D +CWQ EHEWRQD AVVTKWLSG SP
Sbjct: 64  ANFQGRVTIWTQPSQCLYLPLFSIHGPTNIVIDTNCWQCEHEWRQDTAVVTKWLSGASP 122


>IMGA|Medtr1g086160.1 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 16977041-16978180 H
           EGN_Mt090430 20090702
          Length = 328

 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/95 (56%), Positives = 65/95 (68%), Gaps = 2/95 (2%)

Query: 250 SGSVQLHWSQWPPSQNNATPKWFSTSKGLLGAGPSGIMAADAIVTDSGAMHVAGVPIVNP 309
           SGSVQLH  Q P +QN   PKWF  SKGLL  GPSGI+A DAI+TD+G +HVAGV   NP
Sbjct: 235 SGSVQLHCPQRPHTQNETQPKWFCISKGLLDCGPSGIIAGDAIITDNGTLHVAGVRAFNP 294

Query: 310 STVVVWEVTPGPGPGFQAIAKTSTSNGVPPSLNPP 344
           +TV+V E +PG G G +   KTS +   P  L+PP
Sbjct: 295 ATVIVCEASPGHGNGLEFSPKTSITTSAP--LSPP 327