Jatropha Genome Database

JcCA0148271.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0148271.10 + phase: 0 /pseudo/partial
         (164 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g107330.1 Strictosidine synthase; TolB, C-terminal ch...   152   5e-38
IMGA|Medtr2g104630.1 Strictosidine synthase; TolB, C-terminal ch...   126   6e-30
IMGA|Medtr7g107340.1 Strictosidine synthase; TolB, C-terminal ch...   111   2e-25
IMGA|Medtr7g107350.1 Strictosidine synthase; TolB, C-terminal ch...   100   3e-22
IMGA|Medtr5g099310.1 Strictosidine synthase; TolB, C-terminal ch...    99   1e-21
IMGA|Medtr2g118410.1 Strictosidine synthase; TolB, C-terminal ch...    87   4e-18
IMGA|Medtr2g049560.1 Strictosidine synthase; TolB, C-terminal ch...    54   3e-08
IMGA|Medtr8g115450.1 Strictosidine synthase; TolB, C-terminal ch...    53   8e-08
IMGA|Medtr2g049570.1 Strictosidine synthase; TolB, C-terminal ch...    51   3e-07
IMGA|Medtr2g049530.1 Strictosidine synthase; TolB, C-terminal ch...    51   3e-07

>IMGA|Medtr7g107330.1 Strictosidine synthase; TolB, C-terminal
           chr07_pseudomolecule_IMGAG_V3 25066250-25066934 E
           EGN_Mt090430 20090702
          Length = 194

 Score =  152 bits (385), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 79/116 (68%), Positives = 94/116 (81%), Gaps = 2/116 (1%)

Query: 48  FAVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLVG 107
           FAVLPGFPDNIRRNS+G FWVALH+KK  F K + SN W  K LLKL  +FK+L +LL  
Sbjct: 81  FAVLPGFPDNIRRNSEGHFWVALHSKKTPFTKWISSNLWARKALLKLR-NFKRLQALL-A 138

Query: 108 GKPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLGVYNL 163
            KPHA AIKLS++G+I+E LED EGK L+FISEVEEKDGKL + SVLMP++GVY+L
Sbjct: 139 TKPHAAAIKLSDEGEIIESLEDREGKTLKFISEVEEKDGKLWMASVLMPYIGVYSL 194


>IMGA|Medtr2g104630.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 24725955-24723932 E
           EGN_Mt090430 20090702
          Length = 393

 Score =  126 bits (316), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 60/115 (52%), Positives = 84/115 (73%)

Query: 49  AVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLVGG 108
           A+LPGF DN+R N  G+FWVA+H ++ +++ +      I K +LKLP+  +  + L +GG
Sbjct: 278 AILPGFADNVRVNENGDFWVAIHCRRYMYSYINALYPKIRKAILKLPIPTRIQYLLHIGG 337

Query: 109 KPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLGVYNL 163
           K HA  +K S DGK+L++LED EGK ++ +SEVEEKDGKL IGSVLMPF+ VY+L
Sbjct: 338 KMHAAVVKYSPDGKLLQILEDNEGKVVKAVSEVEEKDGKLWIGSVLMPFIAVYHL 392


>IMGA|Medtr7g107340.1 Strictosidine synthase; TolB, C-terminal
           chr07_pseudomolecule_IMGAG_V3 25071831-25076445 E
           EGN_Mt090430 20090702
          Length = 378

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 80/116 (68%), Gaps = 1/116 (0%)

Query: 48  FAVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLVG 107
           FA LPGFPDNI+R+ +G FWV +++++G F + +LS  WIGK L+ LPL   + +S L  
Sbjct: 255 FANLPGFPDNIKRSPRGGFWVGINSRRGKFIQWMLSYPWIGKGLVMLPLDITKTYSYLAK 314

Query: 108 GKPHAT-AIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLGVYN 162
            K     AI+LSE+G +LE++ED +    R ISEVEE+DG L +GS+ +PF+  YN
Sbjct: 315 VKGSTGLAIRLSEEGDLLEIVEDHKSGNRRSISEVEERDGVLWVGSIDVPFVIKYN 370


>IMGA|Medtr7g107350.1 Strictosidine synthase; TolB, C-terminal
           chr07_pseudomolecule_IMGAG_V3 25077509-25079718 E
           EGN_Mt090430 20090702
          Length = 394

 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/117 (44%), Positives = 76/117 (64%), Gaps = 3/117 (2%)

Query: 48  FAVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLV- 106
           FA LPGFPDNI+R+ +G FWV +++++    + ++S  WIGK L+ LPL   + +S L  
Sbjct: 271 FANLPGFPDNIKRSPRGGFWVGINSRREKLIQWMISYPWIGKGLVMLPLDITKTYSYLSK 330

Query: 107 -GGKPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLGVYN 162
             G P   AI+LSE+G +LE++ED        I+EVEE+DG L +GS+  PF+  YN
Sbjct: 331 KKGSP-GLAIRLSEEGDVLEIVEDHRSGNRSSITEVEERDGVLWVGSLDAPFVIKYN 386


>IMGA|Medtr5g099310.1 Strictosidine synthase; TolB, C-terminal
           chr05_pseudomolecule_IMGAG_V3 39700643-39702536 E
           EGN_Mt090430 20090702
          Length = 236

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 68/116 (58%), Gaps = 43/116 (37%)

Query: 48  FAVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLVG 107
           FAVLPG+PDNIRRNS G+FWVALH                                    
Sbjct: 164 FAVLPGYPDNIRRNSDGQFWVALHN----------------------------------- 188

Query: 108 GKPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLGVYNL 163
                 AIKLS++G+ILE++E   GK +R++SE +EKDGKLLIGSVLMP++G+Y+L
Sbjct: 189 -----AAIKLSDEGEILEIVE---GKTMRYVSEADEKDGKLLIGSVLMPYIGIYSL 236


>IMGA|Medtr2g118410.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 28181862-28183878 H
           EGN_Mt090430 20090702
          Length = 407

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 1/105 (0%)

Query: 49  AVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLLVGG 108
           A LPGFPDN+R N KG+FWVA+   +    +++ +N W+     +LP+    L   + G 
Sbjct: 293 ADLPGFPDNVRMNEKGQFWVAIDCCRTGPQEVLSNNPWLRSIYFRLPVRMSLLAKAM-GM 351

Query: 109 KPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSV 153
           K +     L ++GKILEVLED EGK ++ +SEV+E+ GKL IG+V
Sbjct: 352 KMYTMIALLDDNGKILEVLEDREGKVMKLVSEVKEEKGKLWIGTV 396


>IMGA|Medtr2g049560.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 13575491-13579530 E
           EGN_Mt090430 20090702
          Length = 352

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 4/119 (3%)

Query: 46  MFFAVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLHSLL 105
           +F   LP  PDNI     G FW+AL          V + S + K L+ L   F +L +++
Sbjct: 236 IFIENLPAGPDNINLAPDGSFWIALIQVTSERMGFVHT-SKVSKHLVAL---FPRLVNMI 291

Query: 106 VGGKPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLGVYNLQ 164
                 A  +K++ +G I++   D +GKK+ F++   E +  L +GS+   F+G + LQ
Sbjct: 292 NSVTKSAMVVKVTTEGNIIKKFGDNDGKKITFVTSAVEFEDNLYLGSLNTDFVGKFPLQ 350


>IMGA|Medtr8g115450.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 25940727-25942096 E
           EGN_Mt090430 20090702
          Length = 333

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 32/123 (26%)

Query: 43  ERSMFFAVLPGFPDNIRRNSKGEFWVALHAKKGLFAKLVLSNSWIGKTLLKLPLSFKQLH 102
             S  F +L G P+NI+RNS G+FW+++H+  G                L LP+S     
Sbjct: 237 NSSELFMLLTGRPNNIKRNSAGQFWISVHSVLG----------------LGLPIS----- 275

Query: 103 SLLVGGKPHATA----IKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFL 158
                  P  TA    +++SE+  IL++        +   SEV+E +GKL  GS+L  + 
Sbjct: 276 -------PRRTALPRGVRVSENRIILQIASLVAEYGIEPASEVQEYNGKLYAGSLLASYA 328

Query: 159 GVY 161
            ++
Sbjct: 329 SIF 331


>IMGA|Medtr2g049570.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 13581903-13585508 E
           EGN_Mt090430 20090702
          Length = 372

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)

Query: 43  ERSMFFAVLPGFPDNIRRNSKGEFWVAL---HAKKGLFAKLVLSNSWIGKTLLKLPLSFK 99
           +  +F   LPG PDNI     G FW+AL    +K+  F    +  S + K LL    SF 
Sbjct: 252 KTDIFIENLPGGPDNINLAPDGSFWIALVQLTSKRLGF----VHTSIVCKHLLA---SFP 304

Query: 100 QLHSLLVGGKPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLG 159
           +L +L+      A  + +  +G I+    D EGK + F++   E +  L +GS+   F+G
Sbjct: 305 RLINLINSATKSAMVLNVGTEGNIIRKFGDNEGKVISFVTSAVEFEDHLYLGSLNSDFVG 364


>IMGA|Medtr2g049530.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 13555691-13560610 E
           EGN_Mt090430 20090702
          Length = 360

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)

Query: 46  MFFAVLPGFPDNIRRNSKGEFWVAL----HAKKGLFAKLVLSNSWIGKTLLKLPLSFKQL 101
           +F   LP  PDNI     G FW+AL      K G      +  S + K L+ L   F +L
Sbjct: 244 IFIENLPAGPDNINLAPDGSFWIALIQITSEKTGF-----VHTSKVFKHLIAL---FPRL 295

Query: 102 HSLLVGGKPHATAIKLSEDGKILEVLEDCEGKKLRFISEVEEKDGKLLIGSVLMPFLGVY 161
            +L+      A  +K+  +G I++   D  GK + F++   E +  L +GS+   F+G +
Sbjct: 296 FNLISSATKSAMVVKVDIEGNIIKKFGDDNGKIIDFVTSAIEFEDHLYLGSIKCDFVGKF 355

Query: 162 NLQ 164
            LQ
Sbjct: 356 PLQ 358