Jatropha Genome Database

JcCA0147051.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147051.20 + phase: 0 /pseudo
         (273 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g013810.1 Aspartate-semialdehyde dehydrogenase, micro...   231   3e-61

>IMGA|Medtr1g013810.1 Aspartate-semialdehyde dehydrogenase,
           microbial; Semialdehyde dehydrogenase, NAD - binding
           chr01_pseudomolecule_IMGAG_V3 2698723-2704127 E
           EGN_Mt090430 20090702
          Length = 385

 Score =  231 bits (589), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 130/278 (46%), Positives = 171/278 (61%), Gaps = 36/278 (12%)

Query: 1   MSTSVFNSVYLDGGCLCKGQVKFSTLRKRNEHRQCV-VRSAALSTRSLQIRNSKQEKEAR 59
           MS + F S++ +              R R+ ++  +  ++  LS     I++S  +   R
Sbjct: 1   MSATAFRSIFFN--------------RPRSSNKDLIKPQNVKLSPIKCSIKSS--QNNVR 44

Query: 60  VALLGASGYTGAEIIRLLANHPFFEISVMTADKNAGKSIESVFPHFISKKDLPVLVSTND 119
           V +LGASGYTG+EI+RLLANHP F +++MTAD+ AG++I SVFPH +  +DLP L++  D
Sbjct: 45  VGVLGASGYTGSEILRLLANHPQFGVALMTADRKAGQAISSVFPH-LGTQDLPDLIAIKD 103

Query: 120 ASFSDVDAVFCCLPHGTTQEIIKGLPRKLKIVDLSAVWFETTIKTDFRLRDISEYEEWYG 179
           A+FSDVDAVFCCLPHGTTQEIIKGLP+ LKIVDLSA         DFRLRD+SEYEEWYG
Sbjct: 104 ANFSDVDAVFCCLPHGTTQEIIKGLPKHLKIVDLSA---------DFRLRDVSEYEEWYG 154

Query: 180 QSHRAPDLQEEAIYGLTEIFQK--------GNKICTASC*SWLLSNINSTPSCSFTKG*S 231
           Q HRAPDLQ+EAIYGLTE+ ++         N  C  +     L  +        T    
Sbjct: 155 QPHRAPDLQKEAIYGLTEVLREEIKNARLVANPGCYPTSIQLPLVPLIKANLIQTTNIIV 214

Query: 232 HCI*KYHH*RKVWREWSSLYTELTEGIMSYGVTRHRHG 269
                     +  +E + L+TE+TEG+ SYGVTRHRH 
Sbjct: 215 DAKSGVSGAGRSAKE-NLLFTEVTEGMSSYGVTRHRHA 251