Jatropha Genome Database

JcCA0147051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147051.10 + phase: 1 /partial
         (133 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g128980.1 Kinesin, motor region; Kinesin-related chr0...   129   4e-31

>IMGA|Medtr4g128980.1 Kinesin, motor region; Kinesin-related
            chr04_pseudomolecule_IMGAG_V3 30552393-30537894 E
            EGN_Mt090430 20090702
          Length = 2748

 Score =  129 bits (324), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/130 (51%), Positives = 96/130 (73%), Gaps = 1/130 (0%)

Query: 5    RSSIGKSPYIDFDGEQQLMNKLKETEDDRVQIAQRLFGLCTSVLKVAGITKPVSNVTPAA 64
            R+S G   YIDFD E++L   LKE E+++VQ+AQ+L  L  +VLK AGI KP+S+V P+ 
Sbjct: 2619 RASAGSKEYIDFDEEERLRKMLKEIEEEKVQLAQQLLRLSINVLKAAGIAKPMSDVNPSI 2678

Query: 65   AEEALEQMKSKLTSLERECQDLTIKNRITTEKNRLLEVMAQASPVNSRIDENCQTPKRS- 123
            AEEALE++K+++TSLE E ++L  KN+I  EK RL E+M QASP++S+ +EN  TP R+ 
Sbjct: 2679 AEEALEELKNRITSLEMEQENLKFKNKIMKEKIRLSELMPQASPLSSKSEENGITPPRAG 2738

Query: 124  QTSFLSALDR 133
            +  FLS+ +R
Sbjct: 2739 RAPFLSSFER 2748