Jatropha Genome Database

JcCA0146871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0146871.10 + phase: 0 
         (156 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g092790.1 2-dehydro-3-deoxyphosphooctonate aldolase c...   210   3e-55

>IMGA|Medtr7g092790.1 2-dehydro-3-deoxyphosphooctonate aldolase
           chr07_pseudomolecule_IMGAG_V3 20516161-20506640 E
           EGN_Mt090430 20090702
          Length = 299

 Score =  210 bits (534), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 104/122 (85%), Positives = 116/122 (95%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRNLEW+REA+CPVVAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 169 MFGYNDLIVDPRNLEWLREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 228

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARASKGKRRMDIDLTPF 154
           +VAVGVDGIFMEVHDDPL+APVDGPTQWPLRHLE LLEEL+AI+R SKGK+  +IDLTPF
Sbjct: 229 SVAVGVDGIFMEVHDDPLSAPVDGPTQWPLRHLEELLEELIAISRVSKGKKPFNIDLTPF 288

Query: 155 RD 156
           RD
Sbjct: 289 RD 290