Jatropha Genome Database

JcCA0145861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0145861.10 - phase: 0 
         (418 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g025270.1 NmrA-like chr02_pseudomolecule_IMGAG_V3 666...   599   e-172
IMGA|Medtr8g081370.1 O-methyltransferase, family 2 chr08_pseudom...   123   2e-28
IMGA|Medtr3g164000.1 NmrA-like chr03_pseudomolecule_IMGAG_V3 431...    62   7e-10
IMGA|Medtr8g121780.1 NAD-dependent epimerase/dehydratase chr08_p...    53   2e-07
IMGA|Medtr5g020630.1 NmrA-like chr05_pseudomolecule_IMGAG_V3 780...    51   1e-06

>IMGA|Medtr2g025270.1 NmrA-like chr02_pseudomolecule_IMGAG_V3
           6664479-6662735 E EGN_Mt090430 20090702
          Length = 412

 Score =  599 bits (1545), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 301/424 (70%), Positives = 342/424 (80%), Gaps = 18/424 (4%)

Query: 1   MSLCFSSNLFTLH-SPKFYSYKTRFSTQ----FIDQIQVHSFSCSLSPSTPILSEPFKFN 55
           MSLC+SS+ F  H S K  +    FS+     FI+  +V S            + P K+ 
Sbjct: 1   MSLCYSSSTFITHPSLKHQTLSFNFSSHPPSHFINLFKVKS------------NRPIKYT 48

Query: 56  RHRLNPIXXXXXXXXXXXX-XXFRRKNPKDINILVAGSTGYIGKFVVKELVNRGFNVIAI 114
           + +L                  FR KNPKD+N+LV GSTGYIGKFVVKEL+ RGFNV AI
Sbjct: 49  KQKLKLYASLSQSEQIETTPTTFRIKNPKDVNVLVVGSTGYIGKFVVKELIQRGFNVTAI 108

Query: 115 ARERSGIRGKNSKEDTLNDLQGANVCFSDVTNLDILDKSLNDLGVSIDVVVSCLASRSGG 174
           ARE+SGI+G   KE TLN+L+GANVCFSDVTNLD+ D+ L +LGV  DVVVSCLASR+GG
Sbjct: 109 AREKSGIKGSIDKETTLNELRGANVCFSDVTNLDVFDEDLKNLGVGFDVVVSCLASRNGG 168

Query: 175 IKDSWKIDYEATKNSLVAGRNNGANHFVLLSAICVQKPLLEFQRAKLKFEADLMKEAEED 234
           +KDSWKIDYEATKNSL+AGR  GA+HFVLLSAICVQKPLLEFQRAKLK E +L+KEAE+D
Sbjct: 169 VKDSWKIDYEATKNSLLAGRKLGASHFVLLSAICVQKPLLEFQRAKLKLEDELVKEAEKD 228

Query: 235 NGFSYSIVRPTAFFKSLGGQVELVKDGKPYVMFGDGKLCACKPISESDLASFIADCVLSE 294
           + FSYSIVRPTAFFKSLGGQV+LVKDGKPYVMFGDGKLCACKPISE DLASFI DCV+SE
Sbjct: 229 DRFSYSIVRPTAFFKSLGGQVDLVKDGKPYVMFGDGKLCACKPISEQDLASFIVDCVMSE 288

Query: 295 DKINKVLPIGGPGKALTSLEQGEMLFRLLGKEPKFLKVPIGIMDFAIGILDFLANIFPSM 354
           DKINK+LPIGGPGKALT LEQGE+LF+LL KEPKFLKVPIGIMDFAIG+LD L  +FPS+
Sbjct: 289 DKINKILPIGGPGKALTPLEQGEILFKLLRKEPKFLKVPIGIMDFAIGVLDNLVKVFPSL 348

Query: 355 EDAAEFGKIGRYYAAESMLVLDSETGDYSAEKTPSYGKDTLEEFFERVLRDGMAGQELGE 414
           EDAAEFGKIGRYYAAESML+LD +TG+YS EKTPSYG DTLE+FF RVLR+GMAGQELGE
Sbjct: 349 EDAAEFGKIGRYYAAESMLILDPDTGEYSDEKTPSYGNDTLEDFFARVLREGMAGQELGE 408

Query: 415 QTIF 418
           QTIF
Sbjct: 409 QTIF 412


>IMGA|Medtr8g081370.1 O-methyltransferase, family 2
           chr08_pseudomolecule_IMGAG_V3 16667022-16665605 E
           EGN_Mt090430 20090702
          Length = 216

 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 69/94 (73%)

Query: 297 INKVLPIGGPGKALTSLEQGEMLFRLLGKEPKFLKVPIGIMDFAIGILDFLANIFPSMED 356
           I  ++PIGGP  ALT  EQGE+LF+LLGKEPKFLKVPIGIMDFAIG+L     +FPS+ED
Sbjct: 103 IKYIIPIGGPKNALTKTEQGEILFKLLGKEPKFLKVPIGIMDFAIGVLVVSVKVFPSLED 162

Query: 357 AAEFGKIGRYYAAESMLVLDSETGDYSAEKTPSY 390
            AEF KIGRYYA ES+L+LD     +      SY
Sbjct: 163 VAEFVKIGRYYAVESILILDHNFLHWVMMVVGSY 196


>IMGA|Medtr3g164000.1 NmrA-like chr03_pseudomolecule_IMGAG_V3
           43186960-43183508 E EGN_Mt090430 20090702
          Length = 391

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 39/274 (14%)

Query: 83  KDINILVAGSTGYIGKFVVKELVNRGFNVIAIARERSGIRGKNSKEDTLNDLQGANVCFS 142
           +  +ILV G+TG +G+ +V+  ++ G++V      R  +R + +  D L D  GA V  +
Sbjct: 74  RPTSILVVGATGTLGRQIVRRALDEGYDV------RCLVRPRPAPADFLRDW-GATVVNA 126

Query: 143 DVTNLDILDKSLNDLGVSIDVVVSCLASR-SGGIKDSWKIDYEATKNSLVAGRNNGANHF 201
           D++  + +  +L    V +  V+ C   R    IK    +D+E     +   +  G   +
Sbjct: 127 DLSKPETIPATL----VGVHTVIDCATGRPEEPIK---TVDWEGKVALIQCAKAMGIQKY 179

Query: 202 VLLSAICVQK----PLLEFQRAKLKFEADLMKEAEEDNGFSYSIVRPTAFFKSLGGQ--V 255
           V  S     K    PL+E +     F          D+G ++ ++R   F + L GQ  V
Sbjct: 180 VFYSIHNCDKHPEVPLMEIKYCTENF--------LRDSGLNHIVIRLCGFMQGLIGQYAV 231

Query: 256 ELVKDGKPYVMFGDGKLCACKPISESDLA--SFIADCVLSEDKIN-KVLPIGGPGKALTS 312
            ++++     ++G         +   D+A  +FIA   L  +KIN K+L   GP +A T+
Sbjct: 232 PILEEKS---VWGTDAPTRIAYMDTQDIARLTFIA---LRNEKINGKLLTFAGP-RAWTT 284

Query: 313 LEQGEMLFRLLGKEPKFLKVPIGIMDFAIGILDF 346
            E   +  RL G++     VP+ ++     +  F
Sbjct: 285 QEVITLCERLAGQDANVTTVPVSVLRLTRQLTRF 318


>IMGA|Medtr8g121780.1 NAD-dependent epimerase/dehydratase
           chr08_pseudomolecule_IMGAG_V3 28324020-28321852 E
           EGN_Mt090430 20090702
          Length = 292

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 29/174 (16%)

Query: 87  ILVAGSTGYIGKFVVKELVNRGFNVIAIARERSGIRGKNSKEDTLNDLQGANVCFSDVTN 146
           + VAG+TG  GK +V++L+ +GF V      ++G+R  +  + +L+          DVT 
Sbjct: 61  VFVAGATGSTGKRIVEQLLAKGFAV------KAGVRDLDKAKTSLSANPSLQFVKVDVTE 114

Query: 147 LDILDKSLNDLGVSIDVVVSCLASRSGG-IKDSWKIDYEATKNSLVAGRNNGANHFVLLS 205
               DK    +G   + VV     R G  +   WK+D   T N + A R    N F+L+S
Sbjct: 115 GS--DKLAEAIGDDTEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKVNVNRFILIS 172

Query: 206 AICVQ--------KPLLEFQR-------AKLKFEADLMKEAEEDNGFSYSIVRP 244
           +I V          P   F         AKL+ E  + K     +G +Y+I+RP
Sbjct: 173 SILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRK-----SGINYTIIRP 221


>IMGA|Medtr5g020630.1 NmrA-like chr05_pseudomolecule_IMGAG_V3
           7803819-7805695 F EGN_Mt090430 20090702
          Length = 309

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 21/231 (9%)

Query: 87  ILVAGSTGYIGKFVVKELVNRGFNVIAIARERSGIRGKNSKEDTLNDLQGANVCFSDVTN 146
           ILV G TGYIGKF+++     G    A+ RE +    + SK        G  + + D+ +
Sbjct: 8   ILVLGGTGYIGKFIIEASAKAGHPTFALIRESTVSHPEKSKLIESFKTSGVTLLYGDLGD 67

Query: 147 LDILDKSLNDLGVSIDVVVSCLASRSGGIKDSWKIDYEATKNSLVAGRNNGANHFVLLSA 206
            + L K++      +DVV+S L      + D  K+   A K +    R   +   + +  
Sbjct: 68  HESLVKAIKQ----VDVVISTLGGAQ--VDDQVKL-IAAIKEAGNIKRFLPSEFGIDVDR 120

Query: 207 ICVQKPLLEF--QRAKLKFEADLMKEAEEDNGFSYSIVRPTA----FFKSLGGQVELVKD 260
               +P+  F  Q+AK+       + A E  G  Y+ +   A    F  +LG Q      
Sbjct: 121 HHAVEPVASFFGQKAKI-------RRAIEAEGIPYTYISSNAFAGYFLPTLGQQNVTSPP 173

Query: 261 GKPYVMFGDGKLCACKPISESDLASFIADCVLSEDKINKVLPIGGPGKALT 311
               V+ GDG +     ++E D+ ++    V     +NKV+    P   L+
Sbjct: 174 RDKVVILGDGNVKGVY-VTEEDIGTYTIKAVDDPRTLNKVVYFRPPANVLS 223