Jatropha Genome Database

JcCA0145571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0145571.10 - phase: 0 /partial
         (350 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g022250.1 Pyridoxal-dependent decarboxylase; chr07_ps...   517   e-147

>IMGA|Medtr7g022250.1 Pyridoxal-dependent decarboxylase;
           chr07_pseudomolecule_IMGAG_V3 5518776-5527735 E
           EGN_Mt090430 20090702
          Length = 541

 Score =  517 bits (1332), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 249/325 (76%), Positives = 285/325 (87%), Gaps = 2/325 (0%)

Query: 26  MDTNMALVKSILREFRVSANSFLSEYEPLDLLIAPFLTFLLARILRSFLRVIYENGLKAT 85
           MD+  + +KS    FR +ANSFLS+YEPL LL+ P  + L+A  +RSF  VI++ G+KAT
Sbjct: 1   MDS--SALKSQFNHFRTTANSFLSQYEPLTLLLVPLFSLLIANAVRSFFGVIHDKGIKAT 58

Query: 86  VLGFFMSFIKLVPGVKSYIDAEKQKVVDQLQSGTKSKRESWRSELPREGLGTRVIEEMKE 145
           +LGFFM+FIKL+PGVKSYIDAEKQKVVD+LQS  KSKRE W++ELP  GLGT VIE+M+E
Sbjct: 59  LLGFFMNFIKLIPGVKSYIDAEKQKVVDKLQSDGKSKREGWKTELPSMGLGTSVIEKMRE 118

Query: 146 EKRNDVVWQGKCSGTVYIGGSESEGHFALINEACSMFAHTNPLHSDVFQSVARFEAEVVS 205
           EKRND VWQGKCSGTVYIGG ES GHF++INEACSMFAHTNPLH DVFQSV RFEAEVV+
Sbjct: 119 EKRNDAVWQGKCSGTVYIGGDESGGHFSVINEACSMFAHTNPLHLDVFQSVVRFEAEVVA 178

Query: 206 MTASLFGGKEKASGGEICGNMTSGGTESILLAVKSSRDYMKAKKGITRPEMIIPESGHSA 265
           MTA+L G KEK SGG+ICGNMTSGGTESILLAVKSSRDYMK+KKGIT+PEMIIPESGHSA
Sbjct: 179 MTAALLGSKEKTSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITKPEMIIPESGHSA 238

Query: 266 YDKAAQYFNIKLWRVPVNKKFEADVKAIRRHINKNTILIVGSAPGFPHGIIDPIEELGEL 325
           YDKAAQYFNIKLWRVPV+K F+ADVKA RR+INKNTI++VGS+PGFPHGIIDPI+ELG+L
Sbjct: 239 YDKAAQYFNIKLWRVPVDKNFQADVKATRRYINKNTIMLVGSSPGFPHGIIDPIKELGQL 298

Query: 326 AFQYGICLHVDLCLGGFVLPFAHNL 350
           A  + IC HVDLCLGGFVLPFA  L
Sbjct: 299 ASNFDICFHVDLCLGGFVLPFAREL 323