Jatropha Genome Database

JcCA0144561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0144561.10 - phase: 0 
         (694 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g006480.1 Beta-lactamase-like; RNA-metabolising metal...  1178   0.0  
IMGA|Medtr2g005960.1 Beta-lactamase-like; RNA-metabolising metal...  1178   0.0  
IMGA|Medtr1g068100.1 Beta-lactamase-like; TAP42-like protein chr...   117   2e-26

>IMGA|Medtr2g006480.1 Beta-lactamase-like; RNA-metabolising
           metallo-beta-lactamase chr02_pseudomolecule_IMGAG_V3
           662093-666038 E EGN_Mt090430 20090702
          Length = 690

 Score = 1178 bits (3048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 559/689 (81%), Positives = 621/689 (90%), Gaps = 6/689 (0%)

Query: 9   SLKRRDA---PVTREG-DQLTVTPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAA 64
           S+K+R++    + RE  DQL VTPLGAGNEVGRSCVYM+YKGKT+LFDCGIHP YSGMAA
Sbjct: 3   SVKKRESNGGTINRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAA 62

Query: 65  LPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKVIYKLLLTDYVK 124
           LPYFDEIDPST+DVLLITHFHLDHAASLPYFLEKTTFKGRVFMT+ATK IYKLLL+DYVK
Sbjct: 63  LPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVK 122

Query: 125 VSKVSIEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGV 184
           VSKVS++DML+DEQDINRSMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAGV
Sbjct: 123 VSKVSVDDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGV 182

Query: 185 RVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQPRHIREKRFTDVIHSTISQ 244
           RVLYTGDYSREEDRHLRAAE PQFSPD+CIIESTYGVQ HQPRH REKRFTDVIHSTISQ
Sbjct: 183 RVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQ 242

Query: 245 GGRVLIPAFALGRAQELLLILDEFWANHPELHNVPIYYASPLAKKCMTVYQTYILSMNER 304
           GGRVLIPA+ALGRAQELLLILDE+WANHPEL N+PIYYASPLAKKC+TVY+TY LSMN+R
Sbjct: 243 GGRVLIPAYALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDR 302

Query: 305 IRNQFANSNPFKFKHISPLNSIEDFTDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNAC 364
           I+N  A SNPF FKHIS L+SI+ F DVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN+C
Sbjct: 303 IQN--AKSNPFAFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSC 360

Query: 365 VIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLRELMPP 424
           VIPGYVVEGTLAKTI+NEPKEVTLMNGL+APL+MQVHYISFSAHAD AQTS FL EL PP
Sbjct: 361 VIPGYVVEGTLAKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPP 420

Query: 425 NIILVHGEANEMGRLKQKLITEFADGNTKIVTPKNCQSVEMVFNSEKMAKAIGKLAEKTP 484
           NIILVHG ANEMGRLKQKL+T+FAD NTKI+TPKNCQSVEM FNS+KMAK IGKLAEKTP
Sbjct: 421 NIILVHGAANEMGRLKQKLMTQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTP 480

Query: 485 EVGETVSGILVKKGFTYQMMAPEDLHVFSQLLTANITQRITIPFSGAFGVIKHRLEQIYE 544
           EVGETVSG+LVKKGFTYQ+MAP+DLHVFSQL TAN+TQRITIP+SGAF VI+ RL+QIYE
Sbjct: 481 EVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYE 540

Query: 545 SVESGTDEESGVPTLQVHERVTVKQESDRHISLQWSADPISDMVSDSVVALVLNISREMP 604
           SVE   DEESGVP L VH+RVTVK ES++H+SL W++DPI+DMVSDSVVALVLNI+R++P
Sbjct: 541 SVEPSVDEESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLP 600

Query: 605 XXXXXXXXXXXXXXXXXXXXXXIYALLVSIFGDVKPGENGKLVISVDGNVAQLDKQSGDV 664
                                 + ALL S+FG+VK GENGKL+I++DGNVA+L+K+SG+V
Sbjct: 601 KIVAESDATKIEEENEKKTEKVMQALLNSLFGNVKVGENGKLIINIDGNVAELNKESGEV 660

Query: 665 ESENAGLKERVKTVFRRIQSAVRPIPLSG 693
           ESEN GLKERV+T FRRIQS+V+PIPLS 
Sbjct: 661 ESENEGLKERVRTAFRRIQSSVKPIPLSA 689


>IMGA|Medtr2g005960.1 Beta-lactamase-like; RNA-metabolising
           metallo-beta-lactamase chr02_pseudomolecule_IMGAG_V3
           486545-482599 E EGN_Mt090430 20090702
          Length = 690

 Score = 1178 bits (3048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 559/689 (81%), Positives = 621/689 (90%), Gaps = 6/689 (0%)

Query: 9   SLKRRDA---PVTREG-DQLTVTPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAA 64
           S+K+R++    + RE  DQL VTPLGAGNEVGRSCVYM+YKGKT+LFDCGIHP YSGMAA
Sbjct: 3   SVKKRESNGGTINRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAA 62

Query: 65  LPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKVIYKLLLTDYVK 124
           LPYFDEIDPST+DVLLITHFHLDHAASLPYFLEKTTFKGRVFMT+ATK IYKLLL+DYVK
Sbjct: 63  LPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVK 122

Query: 125 VSKVSIEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGV 184
           VSKVS++DML+DEQDINRSMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAGV
Sbjct: 123 VSKVSVDDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGV 182

Query: 185 RVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQPRHIREKRFTDVIHSTISQ 244
           RVLYTGDYSREEDRHLRAAE PQFSPD+CIIESTYGVQ HQPRH REKRFTDVIHSTISQ
Sbjct: 183 RVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQ 242

Query: 245 GGRVLIPAFALGRAQELLLILDEFWANHPELHNVPIYYASPLAKKCMTVYQTYILSMNER 304
           GGRVLIPA+ALGRAQELLLILDE+WANHPEL N+PIYYASPLAKKC+TVY+TY LSMN+R
Sbjct: 243 GGRVLIPAYALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDR 302

Query: 305 IRNQFANSNPFKFKHISPLNSIEDFTDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNAC 364
           I+N  A SNPF FKHIS L+SI+ F DVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN+C
Sbjct: 303 IQN--AKSNPFAFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSC 360

Query: 365 VIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLRELMPP 424
           VIPGYVVEGTLAKTI+NEPKEVTLMNGL+APL+MQVHYISFSAHAD AQTS FL EL PP
Sbjct: 361 VIPGYVVEGTLAKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPP 420

Query: 425 NIILVHGEANEMGRLKQKLITEFADGNTKIVTPKNCQSVEMVFNSEKMAKAIGKLAEKTP 484
           NIILVHG ANEMGRLKQKL+T+FAD NTKI+TPKNCQSVEM FNS+KMAK IGKLAEKTP
Sbjct: 421 NIILVHGAANEMGRLKQKLMTQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTP 480

Query: 485 EVGETVSGILVKKGFTYQMMAPEDLHVFSQLLTANITQRITIPFSGAFGVIKHRLEQIYE 544
           EVGETVSG+LVKKGFTYQ+MAP+DLHVFSQL TAN+TQRITIP+SGAF VI+ RL+QIYE
Sbjct: 481 EVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYE 540

Query: 545 SVESGTDEESGVPTLQVHERVTVKQESDRHISLQWSADPISDMVSDSVVALVLNISREMP 604
           SVE   DEESGVP L VH+RVTVK ES++H+SL W++DPI+DMVSDSVVALVLNI+R++P
Sbjct: 541 SVEPSVDEESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLP 600

Query: 605 XXXXXXXXXXXXXXXXXXXXXXIYALLVSIFGDVKPGENGKLVISVDGNVAQLDKQSGDV 664
                                 + ALL S+FG+VK GENGKL+I++DGNVA+L+K+SG+V
Sbjct: 601 KIVAESDATKIEEENEKKTEKVMQALLNSLFGNVKVGENGKLIINIDGNVAELNKESGEV 660

Query: 665 ESENAGLKERVKTVFRRIQSAVRPIPLSG 693
           ESEN GLKERV+T FRRIQS+V+PIPLS 
Sbjct: 661 ESENEGLKERVRTAFRRIQSSVKPIPLSA 689


>IMGA|Medtr1g068100.1 Beta-lactamase-like; TAP42-like protein
           chr01_pseudomolecule_IMGAG_V3 13492898-13488459 E
           EGN_Mt090430 20090702
          Length = 634

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 150/308 (48%), Gaps = 37/308 (12%)

Query: 21  GDQLTVTPL-GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPS----- 74
           G  + VTPL G  NE   S + +S     IL DCG            + D  DPS     
Sbjct: 2   GTSVQVTPLCGVYNENPLSYL-VSIDSFNILIDCG------------WNDHFDPSLLQPL 48

Query: 75  -----TIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKVIYKL-LLTDYVK-VSK 127
                TID +L++H    H A+LPY ++       V+   +T+ +Y+L LLT Y   +S+
Sbjct: 49  SRVASTIDAVLLSHPDTLHLAALPYAIKHLGLSAPVY---STEPVYRLGLLTMYDHFLSR 105

Query: 128 VSIEDM-LFDEQDINRSMDKIEVIDFHQTVEVNG----IKFWCYTAGHVLGAAMFMVDIA 182
             + D  LF   DI+ +   +  + + Q   ++G    I    +TAGH+LG  ++ +   
Sbjct: 106 KQVSDFDLFTLDDIDSAFQTVTRLTYSQNHHLSGKGEGIVIAPHTAGHLLGGTIWKITKD 165

Query: 183 GVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQP-RHIREKRFTDVIHST 241
           G  V+Y  D++  ++RHL    +  F     +I   Y    +QP R  ++K F D++  T
Sbjct: 166 GEDVIYAVDFNHRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKT 225

Query: 242 ISQGGRVLIPAFALGRAQELLLILDEFWANHPELHNVPIYYASPLAKKCMTVYQTYILSM 301
           +  GG VL+P    GR  EL+L+L+ +WA+  E  N PIY+ + +A   +   ++++  M
Sbjct: 226 LRAGGNVLLPVDTAGRILELILMLESYWAD--ENLNYPIYFLTYVASSTIDYVKSFLEWM 283

Query: 302 NERIRNQF 309
           ++ I   F
Sbjct: 284 SDSIAKSF 291