Jatropha Genome Database

JcCA0144441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0144441.10 - phase: 0 
         (366 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g023640.1 Thiolase chr04_pseudomolecule_IMGAG_V3 5223...   426   e-120
IMGA|AC233669_10.1 Thiolase AC233669.2 43191-49625 E EGN_Mt09043...    97   1e-20
IMGA|Medtr5g106000.1 Thiolase chr05_pseudomolecule_IMGAG_V3 4259...    91   8e-19
IMGA|Medtr5g106000.2 Thiolase; chr05_pseudomolecule_IMGAG_V3 425...    84   1e-16
IMGA|AC233669_10.2 Thiolase AC233669.2 43191-45704 E EGN_Mt09043...    50   1e-06

>IMGA|Medtr4g023640.1 Thiolase chr04_pseudomolecule_IMGAG_V3
           5223767-5218589 F EGN_Mt090430 20090702
          Length = 435

 Score =  426 bits (1095), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 247/340 (72%), Gaps = 25/340 (7%)

Query: 1   MEKAINRQRVLLDHLRPXXXXXXXXXXXXXXXACLAGDSAAYQRTAVFGDDVVIVAAYRT 60
           MEKA+ RQRVLL HL P                C AG +   +      +DVVIVAAYRT
Sbjct: 1   MEKAVERQRVLLQHLNPNSVTSSHHSTHLSASLCSAGQTGGSE------NDVVIVAAYRT 54

Query: 61  PLCKSKRGGFKDTHADDLLAPVLKALIEKTNLNASEVGDIVVGTVLAPGSQRASECRMAA 120
            +CK+KRGGFKDT  DDLLA VLKA+IEKTN+  SEVGDIVVGTVL PGS+RA ECRMAA
Sbjct: 55  AICKAKRGGFKDTLPDDLLASVLKAVIEKTNVEPSEVGDIVVGTVLGPGSERAIECRMAA 114

Query: 121 FYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGKIIITISIAYLHFAIMVLGI 180
           FYAGFP+TVP+RTVNRQCSSGLQ           GFYDIG                   I
Sbjct: 115 FYAGFPDTVPLRTVNRQCSSGLQAVADVAAYIKAGFYDIG-------------------I 155

Query: 181 GAGLESMTINQMAWDGDVNPKVKIFEKAQNCLLPMGVTSENVAHRFGVTRQEQDQAAVES 240
           GAGLE MT + ++     NPKV+IF +A++CLL MG+TSENVA R+GVTRQEQDQAAVES
Sbjct: 156 GAGLECMTQDTISGVRKTNPKVEIFAQARDCLLSMGITSENVAQRYGVTRQEQDQAAVES 215

Query: 241 HRKXXXXXXXGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSLSDLAKLKPVFK 300
           HR+       GKFKDEIIPV+TK VDPKTG+EK + +SVDDGIRPN +L DLAKLKP FK
Sbjct: 216 HRRAAAATASGKFKDEIIPVSTKFVDPKTGEEKQIIVSVDDGIRPNANLVDLAKLKPAFK 275

Query: 301 KDGTTTAGNSSQITDGAGAVLLMKRSVAMRKGLPILGVFR 340
           KDGTTTAGN+SQ++DGA AVLLMKRSVA++KGLPILG+FR
Sbjct: 276 KDGTTTAGNASQVSDGAAAVLLMKRSVAVQKGLPILGIFR 315


>IMGA|AC233669_10.1 Thiolase AC233669.2 43191-49625 E EGN_Mt090430
           20090702
          Length = 408

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 140/293 (47%), Gaps = 28/293 (9%)

Query: 51  DVVIVAAYRTPLCKSKRGGF----KDTHADDLLAPVLKALIEKTNLNASEVGDIVVGTVL 106
           DV IV   RTP+     GGF        A  L +  +KA +++ N++ S V ++  G VL
Sbjct: 7   DVCIVGVGRTPM-----GGFLGSLSSLSATHLGSLAIKAALKRANVDPSLVQEVFFGNVL 61

Query: 107 APGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGKI--II 164
           +    +A   R AA  AG P +V   T+N+ CSSG++           G  D+  +  + 
Sbjct: 62  SANLGQA-PARQAALGAGIPTSVICTTINKVCSSGMKATMLAAQTIQLGSNDVVVVGGME 120

Query: 165 TISIAYLHFAIMVLGIGAGLESMTINQMAWDGDVNPKVKIFEKAQNCLLPMGVTSENVAH 224
           ++S A  + A    G   G +++ I+ M  DG       +++   +    MGV +E  A 
Sbjct: 121 SMSNAPKYIAEARKGSRLGHDTI-IDGMLKDG-------LWDVYND--FGMGVCAEMCAD 170

Query: 225 RFGVTRQEQDQAAVESHRKXXXXXXXGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIR 284
           +  +TR +QD  A++S  +       G F  EI+PV     +  +G  KP T+   D   
Sbjct: 171 QHAITRDQQDSYAIQSFERGISAQNGGHFAWEIVPV-----EIFSGRGKPSTLVDKDEGL 225

Query: 285 PNTSLSDLAKLKPVFKK-DGTTTAGNSSQITDGAGAVLLMKRSVAMRKGLPIL 336
                + L KL P FKK  GT TAGN+S I+DGA A++L+    A   GL ++
Sbjct: 226 GKFDAAKLRKLGPNFKKVGGTVTAGNASSISDGAAALVLVSEKKAHELGLHVI 278


>IMGA|Medtr5g106000.1 Thiolase chr05_pseudomolecule_IMGAG_V3
           42593338-42586767 E EGN_Mt090430 20090702
          Length = 407

 Score = 91.3 bits (225), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 24/291 (8%)

Query: 51  DVVIVAAYRTPLCKSKRGGFKDTHADDLLAPVLKALIEKTNLNASEVGDIVVGTVLAPGS 110
           DV IV   RTP+  +  G      A  L +  ++A +++ N++ + V ++  G VL+   
Sbjct: 16  DVCIVGVARTPM-GAFLGTLSSVPATKLGSIAIEAALKRANVDPAIVEEVFFGNVLSANL 74

Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDI--GKIIITISI 168
            +A   R AA  AG  ++V   TVN+ C+SG++           G  D+     +  +S 
Sbjct: 75  GQA-PARQAALGAGLSKSVVCTTVNKVCASGMKATMLAAQSIQLGINDVVVAGGMENMSS 133

Query: 169 AYLHFAIMVLGIGAGLESMTINQMAWDG--DVNPKVKIFEKAQNCLLPMGVTSENVAHRF 226
              + A    G   G +S+ ++ M  DG  DV   V            MGV +E  A   
Sbjct: 134 VPKYLAEARKGSRLGHDSL-VDGMLKDGLWDVYKDVG-----------MGVCAELCADNH 181

Query: 227 GVTRQEQDQAAVESHRKXXXXXXXGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPN 286
            +TR++QD  AV+S  +       G F  EI PV     +   G  +P TI   D     
Sbjct: 182 SITREDQDNYAVQSFERGISAQENGYFGWEITPV-----EVSGGRGRPSTIVDKDEGLGK 236

Query: 287 TSLSDLAKLKPVFKK-DGTTTAGNSSQITDGAGAVLLMKRSVAMRKGLPIL 336
              + L KL+P FK+  G+ TAGN+S I+DGA A++L+    A++ GL ++
Sbjct: 237 FDAAKLRKLRPSFKETGGSVTAGNASSISDGAAALVLVSGEKALKLGLQVI 287


>IMGA|Medtr5g106000.2 Thiolase; chr05_pseudomolecule_IMGAG_V3
           42594226-42586767 E EGN_Mt090430 20090702
          Length = 381

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 68  GGFKDTHADDLLAPVLKALIEKTNLNASEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127
           G      A  L +  ++A +++ N++ + V ++  G VL+    +A   R AA  AG  +
Sbjct: 6   GTLSSVPATKLGSIAIEAALKRANVDPAIVEEVFFGNVLSANLGQA-PARQAALGAGLSK 64

Query: 128 TVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDI--GKIIITISIAYLHFAIMVLGIGAGLE 185
           +V   TVN+ C+SG++           G  D+     +  +S    + A    G   G +
Sbjct: 65  SVVCTTVNKVCASGMKATMLAAQSIQLGINDVVVAGGMENMSSVPKYLAEARKGSRLGHD 124

Query: 186 SMTINQMAWDG--DVNPKVKIFEKAQNCLLPMGVTSENVAHRFGVTRQEQDQAAVESHRK 243
           S+ ++ M  DG  DV   V            MGV +E  A    +TR++QD  AV+S  +
Sbjct: 125 SL-VDGMLKDGLWDVYKDVG-----------MGVCAELCADNHSITREDQDNYAVQSFER 172

Query: 244 XXXXXXXGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSLSDLAKLKPVFKK-D 302
                  G F  EI PV     +   G  +P TI   D        + L KL+P FK+  
Sbjct: 173 GISAQENGYFGWEITPV-----EVSGGRGRPSTIVDKDEGLGKFDAAKLRKLRPSFKETG 227

Query: 303 GTTTAGNSSQITDGAGAVLLMKRSVAMRKGLPIL 336
           G+ TAGN+S I+DGA A++L+    A++ GL ++
Sbjct: 228 GSVTAGNASSISDGAAALVLVSGEKALKLGLQVI 261


>IMGA|AC233669_10.2 Thiolase AC233669.2 43191-45704 E EGN_Mt090430
           20090702
          Length = 191

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 51  DVVIVAAYRTPLCKSKRGGF----KDTHADDLLAPVLKALIEKTNLNASEVGDIVVGTVL 106
           DV IV   RTP+     GGF        A  L +  +KA +++ N++ S V ++  G VL
Sbjct: 7   DVCIVGVGRTPM-----GGFLGSLSSLSATHLGSLAIKAALKRANVDPSLVQEVFFGNVL 61

Query: 107 APGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDI 159
           +    +A   R AA  AG P +V   T+N+ CSSG++           G  D+
Sbjct: 62  SANLGQAPA-RQAALGAGIPTSVICTTINKVCSSGMKATMLAAQTIQLGSNDV 113