Jatropha Genome Database

JcCA0143091.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0143091.10 - phase: 0 
         (228 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g150640.1 hypothetical protein chr03_pseudomolecule_I...   256   6e-69

>IMGA|Medtr3g150640.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 39738865-39736152 E
           EGN_Mt090430 20090702
          Length = 257

 Score =  256 bits (654), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 126/171 (73%), Positives = 144/171 (84%), Gaps = 1/171 (0%)

Query: 59  PLPSLAIPSPNS-LSSPVIPTTPFSQSKNLILGPEDGKIRPCPSTNPSCVSTNPKSSSFA 117
           PLPS AIPS NS      + TTPFSQSKNL LG E+GKIRPCPS NP C+STNPKSSSF 
Sbjct: 46  PLPSHAIPSLNSQPPPTTLSTTPFSQSKNLQLGLENGKIRPCPSINPGCISTNPKSSSFD 105

Query: 118 FPLTIPDDSTDNAIQKLQEAILKTQRNAKIQVIEDAPNGTYLQAEVDGGFGRDVLEFLVK 177
           FP T+P++S DNAIQ+L+EAIL+TQ+N K Q +ED P+G YLQAEVDG F RDVLEFLVK
Sbjct: 106 FPWTVPENSVDNAIQRLREAILETQKNVKFQPVEDTPDGQYLQAEVDGKFDRDVLEFLVK 165

Query: 178 GDVVAYRCMATKVTYVYPFTTALGDSKGQEERMKKIIEQLGWYAPSFDSMD 228
           GDVVA+RCMA KVTY+YPFTTA GDSKGQE R+K+I +QLGWYAPSFDSM+
Sbjct: 166 GDVVAFRCMAAKVTYIYPFTTAFGDSKGQEARLKQINDQLGWYAPSFDSME 216