Jatropha Genome Database
- JcCA0142811.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0142811.10 + phase: 0 /partial
(166 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcripti... 131 2e-31
IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcripti... 124 2e-29
IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcripti... 111 2e-25
IMGA|Medtr7g083430.1 Transcription factor, K-box chr07_pseudomol... 76 6e-15
IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcripti... 68 3e-12
IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcripti... 66 7e-12
IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcripti... 66 9e-12
IMGA|Medtr5g049080.1 Transcription factor, K-box chr05_pseudomol... 64 4e-11
IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcripti... 55 1e-08
IMGA|Medtr7g083450.1 Transcription factor, K-box chr07_pseudomol... 53 6e-08
IMGA|Medtr5g075960.1 Transcription factor, K-box chr05_pseudomol... 53 8e-08
IMGA|Medtr2g010020.1 Transcription factor, K-box chr02_pseudomol... 52 2e-07
IMGA|Medtr1g046070.1 Transcription factor, MADS-box; Transcripti... 50 5e-07
IMGA|Medtr3g013050.1 Transcription factor, MADS-box; Transcripti... 46 7e-06
>IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcription
factor, K-box chr05_pseudomolecule_IMGAG_V3
20888794-20881921 E EGN_Mt090430 20090702
Length = 301
Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 102/129 (79%), Gaps = 4/129 (3%)
Query: 1 MERILERYERYSFSER--APNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
ME+ILER+ERY ++ER NDT++QENW +E +LKA++ +L+R+ R+ GE+LDSM+L
Sbjct: 63 MEQILERHERYGYAERLLVGNDTDTQENWTMEYTRLKAKVELLQRNHRHYMGEELDSMSL 122
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLAED 118
+ELQ LE Q+D LK +R+RK Q+ ++++ ELQK+E+ + +QNN+LSK+++E +K +A++
Sbjct: 123 KELQCLEQQLDTGLKNIRTRKTQVMYEAISELQKKEKGIQEQNNMLSKEIKEKEKVVAQE 182
Query: 119 --AQWEQQN 125
AQWEQ N
Sbjct: 183 AAAQWEQPN 191
>IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcription
factor, K-box chr08_pseudomolecule_IMGAG_V3
15487044-15481223 E EGN_Mt090430 20090702
Length = 240
Score = 124 bits (311), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 100/128 (78%), Gaps = 3/128 (2%)
Query: 1 MERILERYERYSFSER--APNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
ME+ILERYERYS++ER ND+ESQ NW +E +LKA+I +L+R+ R+ GEDL SM+L
Sbjct: 63 MEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSMSL 122
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLA-E 117
+ELQ LE Q+D ALK +R+R+NQ+ ++S+ ELQK+E+ + +QNN+L+K+++E +K A +
Sbjct: 123 KELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAAQQ 182
Query: 118 DAQWEQQN 125
AQWE N
Sbjct: 183 QAQWEHPN 190
>IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcription
factor, K-box chr07_pseudomolecule_IMGAG_V3
3615380-3622271 E EGN_Mt090430 20090702
Length = 256
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
Query: 1 MERILERYERYSFSERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLRE 60
ME ILERYER + +E E+Q NW E KL A++ +LER+LRN G DLD ++++E
Sbjct: 63 MEDILERYERQNHTELTGATNETQGNWSFEYMKLTAKVQVLERNLRNFVGNDLDPLSVKE 122
Query: 61 LQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLAEDAQ 120
LQ LE Q+D +LKR+R+RKNQ+ + S+ EL K+ R+L +QNN L+K +E +K ++E Q
Sbjct: 123 LQSLEQQLDTSLKRIRTRKNQVMNQSISELHKRARTLQEQNNKLAKT-KEKEKTVSEHPQ 181
Query: 121 WEQQNLG 127
+ +G
Sbjct: 182 RCLETIG 188
>IMGA|Medtr7g083430.1 Transcription factor, K-box
chr07_pseudomolecule_IMGAG_V3 17802338-17805458 H
EGN_Mt090430 20090702
Length = 211
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Query: 1 MERILERYERYSFSERAPNDTESQ-ENWPVECPKLKARIGILERSLRNLAGEDLDSMTLR 59
+ + LERY+R SF+ + N E + +NW E KLKA+ L++S R L GEDL + ++
Sbjct: 6 IGKTLERYQRCSFTSQNDNVNEHETQNWYQEMSKLKAKYESLQKSQRQLLGEDLGPLNMK 65
Query: 60 ELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEEN 111
ELQ+LE Q++ AL + R RK Q+ + + EL+++ER L D N L +LE +
Sbjct: 66 ELQNLEKQLEGALAQARQRKTQIMVEQMEELKRKERHLGDINKQLRFKLESD 117
>IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcription
factor, K-box chr04_pseudomolecule_IMGAG_V3
36883844-36877638 E EGN_Mt090430 20090702
Length = 241
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 12/135 (8%)
Query: 1 MERILERYERYSF-------SERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDL 53
M + LERY++ ++ S R + SQ+ + KLKAR L+RS RNL GEDL
Sbjct: 63 MLKTLERYQKCNYGAPETNVSAREALELSSQQEYL----KLKARYEALQRSQRNLMGEDL 118
Query: 54 DSMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQ- 112
++ +EL+ LE Q+D++LK++RS + Q D L +LQ++E L + N L ++LE Q
Sbjct: 119 GPLSSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLEGYQL 178
Query: 113 KKLAEDAQWEQQNLG 127
+L +A E+ G
Sbjct: 179 NQLQMNACVEEMGYG 193
>IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcription
factor, K-box chr03_pseudomolecule_IMGAG_V3
25812647-25808917 E EGN_Mt090430 20090702
Length = 246
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 13/141 (9%)
Query: 1 MERILERYERYSFSERAPNDTESQENWPVECP------KLKARIGILERSLRNLAGEDLD 54
M + LERY++ ++ N S+E +E KLKAR L+R+ RNL GEDL
Sbjct: 63 MLKTLERYQKCNYGAPEAN-AHSKEALVLELSSQQEYLKLKARYESLQRTQRNLMGEDLG 121
Query: 55 SMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKK 114
++ ++L+ LE Q+D++LK++RS + Q D L +LQ++E L + N L +++E Q
Sbjct: 122 PLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRMEGYQIN 181
Query: 115 ------LAEDAQWEQQNLGQN 129
AED + + + GQN
Sbjct: 182 SLQLNLSAEDMGYGRHHPGQN 202
>IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcription
factor, K-box chr07_pseudomolecule_IMGAG_V3
3593718-3599199 E EGN_Mt090430 20090702
Length = 245
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 1 MERILERYERYSFSE-RAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLR 59
M + L+RY++ S+ + E+ E KLK R L+R+ RNL GEDL ++ +
Sbjct: 63 MLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPLSSK 122
Query: 60 ELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEE 110
+L+ LE Q+D++LK+VRS K Q D L +LQ +E L + N LS +LEE
Sbjct: 123 DLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEE 173
>IMGA|Medtr5g049080.1 Transcription factor, K-box
chr05_pseudomolecule_IMGAG_V3 20901480-20897129 H
EGN_Mt090430 20090702
Length = 128
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 30 ECPKLKARIGILERSLRNLAGEDLDSMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLE 89
E KLK+++ L+++ RN+ GE+L+ + + EL+ +E Q+D++LK +RS K Q D L +
Sbjct: 7 EYIKLKSKVEALQQTQRNILGEELEQLDINELEQIERQVDSSLKTIRSNKTQHMLDQLTD 66
Query: 90 LQKQERSLHDQNNLLSKQLEE 110
LQK+E L + NN+L +LEE
Sbjct: 67 LQKKEEMLLETNNILRNKLEE 87
>IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcription
factor, K-box chr04_pseudomolecule_IMGAG_V3
33294099-33299967 E EGN_Mt090430 20090702
Length = 251
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 5 LERYERYSFSERAPNDTESQEN---WPVECPKLKARIGILERSLRNLAGEDLDSMTLREL 61
+ERY++ + S+ + + S+ N + E KL+ +I L+ R + GE L +M ++L
Sbjct: 89 IERYKK-ACSDSSGAKSASESNVQYYQQEAAKLRVQISNLQNHNRQMMGESLSNMNGKDL 147
Query: 62 QHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKK 114
++LE +++ + R+RS+KN++ L +QK+E LH+ N +L ++ E++++
Sbjct: 148 RNLESKLEKGISRIRSKKNEMLFAELEYMQKREVELHNSNQVLRAKISESEQR 200
>IMGA|Medtr7g083450.1 Transcription factor, K-box
chr07_pseudomolecule_IMGAG_V3 17811872-17810220 F
EGN_Mt090430 20090702
Length = 115
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%)
Query: 37 RIGILERSLRNLAGEDLDSMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERS 96
+I +LE S R L GE L S +L ELQ +E Q++ ++ VR+RKNQ Y + +L+++E++
Sbjct: 3 KIELLEASKRKLMGEGLGSCSLDELQQIEQQLEKSVSVVRARKNQAYKHQIDQLKEKEKN 62
Query: 97 LHDQNNLLSK 106
L +N LSK
Sbjct: 63 LVAENARLSK 72
>IMGA|Medtr5g075960.1 Transcription factor, K-box
chr05_pseudomolecule_IMGAG_V3 27711235-27721420 E
EGN_Mt090430 20090702
Length = 169
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 1 MERILERYERYSFSERAPNDTESQ-ENWPVECPKLKARIGILERSLRNLAGEDLDSMTLR 59
M +++RY + + S+ + W E L+ ++ L+ S R + GE+L +T++
Sbjct: 6 MRSVIDRYNKTKEEHNQLGSSTSEIKFWQREAAMLRQQLHNLQESHRQIMGEELSGLTVK 65
Query: 60 ELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQN 101
ELQ LE+Q++ +L+ VR +K QL+ D + EL ++ +H +N
Sbjct: 66 ELQGLENQLEISLRGVRMKKEQLFMDEIQELNRKGDIIHQEN 107
>IMGA|Medtr2g010020.1 Transcription factor, K-box
chr02_pseudomolecule_IMGAG_V3 2311955-2312917 H
EGN_Mt090430 20090702
Length = 121
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%)
Query: 27 WPVECPKLKARIGILERSLRNLAGEDLDSMTLRELQHLEHQIDNALKRVRSRKNQLYHDS 86
W E L+ ++ L+ S R L GE L + ++ELQ+LE+Q++ +LK VR +K+ + +
Sbjct: 22 WQTEAATLRQQLQYLQESHRQLMGEGLSGLGIKELQNLENQLEISLKGVRMKKDHILTNE 81
Query: 87 LLELQKQERSLHDQNNLLSKQLEENQKKLAE 117
+ EL ++ +H +N L K+++ QK+ AE
Sbjct: 82 IKELHQKGNLVHQENVELHKKMDLVQKENAE 112
>IMGA|Medtr1g046070.1 Transcription factor, MADS-box; Transcription
factor, K-box chr01_pseudomolecule_IMGAG_V3
10653449-10650286 E EGN_Mt090430 20090702
Length = 232
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 1 MERILERYERYSFSERAPNDTESQENWPVECPKLKARIGILERSLR------NLAGEDLD 54
M++I+ERYER S +R + + + P E + + SLR G+D+
Sbjct: 64 MDQIIERYER-STGKRIMAEHDDHQIHPRELEMFHDMAMLRQESLRLELGIQRYLGDDMK 122
Query: 55 SMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLS----KQLEE 110
+ +L +EH+++ +L +VR+R+N+L + LQ++ER L D+N LS K + E
Sbjct: 123 DLQFDDLSKIEHELEISLAKVRNRQNELMQQQMENLQRKERILQDENMNLSNWEHKAVME 182
Query: 111 NQKKLAEDAQWEQQNLG 127
N+ + + A +E Q L
Sbjct: 183 NKAVMDQFAFFEDQPLS 199
>IMGA|Medtr3g013050.1 Transcription factor, MADS-box; Transcription
factor, K-box chr03_pseudomolecule_IMGAG_V3
2348300-2341992 E EGN_Mt090430 20090702
Length = 223
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 52/79 (65%)
Query: 30 ECPKLKARIGILERSLRNLAGEDLDSMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLE 89
E KL+ +I +L+ S R+L G+ L ++T++EL+ LE++++ + R+RS+K+++ +
Sbjct: 93 ESAKLRQQIQMLQNSNRHLMGDALSTLTVKELKQLENRLERGITRIRSKKHEMLLAEIEY 152
Query: 90 LQKQERSLHDQNNLLSKQL 108
QK+E L ++N L ++
Sbjct: 153 FQKREIELENENLCLRTKI 171