Jatropha Genome Database

JcCA0142191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0142191.20 - phase: 0 /pseudo/partial
         (109 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g115680.1 Alcohol dehydrogenase superfamily, zinc-con...    68   1e-12
IMGA|Medtr5g102600.1 Alcohol dehydrogenase superfamily, zinc-con...    57   2e-09

>IMGA|Medtr4g115680.1 Alcohol dehydrogenase superfamily,
           zinc-containing chr04_pseudomolecule_IMGAG_V3
           26838003-26836216 H EGN_Mt090430 20090702
          Length = 350

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/52 (57%), Positives = 40/52 (76%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKVADE 109
           PK  + ++P I+E K+ YVEDI +G+E GPAA+VG+F G N GKQ+VKVA E
Sbjct: 299 PKLLKTVLPYIREHKVFYVEDIVEGLEKGPAALVGLFSGRNFGKQIVKVAGE 350


>IMGA|Medtr5g102600.1 Alcohol dehydrogenase superfamily,
           zinc-containing chr05_pseudomolecule_IMGAG_V3
           41081257-41081556 H EGN_Mt090430 20090702
          Length = 99

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 37/49 (75%)

Query: 58  PKYHEMIIPKIKEGKIVYVEDIADGIESGPAAVVGVFRGCNMGKQVVKV 106
           PK+ + I+P ++EGKI YVEDIA GIESGPAA+  +F G +  +QVV V
Sbjct: 50  PKFLDTILPYVREGKIAYVEDIAIGIESGPAALEAMFTGKSADEQVVLV 98