Jatropha Genome Database

JcCA0142031.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0142031.20 + phase: 0 
         (169 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g084440.1 T1N6.11, related, putative chr07_pseudomole...   107   4e-24

>IMGA|Medtr7g084440.1 T1N6.11, related, putative
           chr07_pseudomolecule_IMGAG_V3 18232515-18230190 E
           EGN_Mt090430 20090702
          Length = 152

 Score =  107 bits (266), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/123 (50%), Positives = 83/123 (67%), Gaps = 7/123 (5%)

Query: 49  MAKKILEYRSTFPNQLEVTLASVLSAQRPFLPSMDSG--SDLGPAGEFNPGLEEQVNSSK 106
           M+ KILE+RST P+QL+ TL SVL +QRPFLP  +S   + L P G    G  +Q  S +
Sbjct: 33  MSHKILEFRSTLPDQLKSTLLSVLESQRPFLPQFNSAFRNYLVPFG----GASDQNISRE 88

Query: 107 PTSLTEGDQKITEKVRLLKDKISSNVSAMPTVLNRMKECMSKIDNLDSH-VGTLHPFSKK 165
            +S T  D +  EKV+LLK+KISSN +AMP VL RMK+C++KI+ LDS+    +H   K+
Sbjct: 89  GSSSTAEDPESAEKVKLLKEKISSNCAAMPIVLKRMKDCIAKIEKLDSYNAANIHQGFKR 148

Query: 166 KKT 168
           KKT
Sbjct: 149 KKT 151