Jatropha Genome Database

JcCA0142031.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0142031.10 - phase: 0 /pseudo/partial
         (126 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g099170.1 Asparaginase/glutaminase chr05_pseudomolecu...    57   2e-09
IMGA|Medtr5g085560.1 Ankyrin chr05_pseudomolecule_IMGAG_V3 32691...    57   3e-09
IMGA|Medtr4g137160.1 Protein kinase chr04_pseudomolecule_IMGAG_V...    55   7e-09
IMGA|Medtr8g119290.1 Cyclic nucleotide-binding chr08_pseudomolec...    47   3e-06
IMGA|Medtr3g136490.1 Cyclic nucleotide-binding chr03_pseudomolec...    47   3e-06

>IMGA|Medtr5g099170.1 Asparaginase/glutaminase
           chr05_pseudomolecule_IMGAG_V3 39639019-39638471 H
           EGN_Mt090430 20090702
          Length = 149

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 26/97 (26%)

Query: 4   LEKGVEPNLADYDKRTALHLASCEGCNEIVVLLLEKGADVNSVDRWGRTVFPICLAALVL 63
           L+ G + N  D D R+ALH+A+C+G  ++V LLL++GA+V+  DRW  T           
Sbjct: 70  LDDGSDVNFRDTDGRSALHVAACQGRTDVVELLLQRGAEVDVQDRWCST----------- 118

Query: 64  FAYSRHFIGFSFFPHPLSDARSFGHEDICKILESRGG 100
                          PL+DA  + + D+ K+LE  G 
Sbjct: 119 ---------------PLADALYYKNHDVVKLLEQHGA 140


>IMGA|Medtr5g085560.1 Ankyrin chr05_pseudomolecule_IMGAG_V3
           32691390-32690222 E EGN_Mt090430 20090702
          Length = 223

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 26/93 (27%)

Query: 4   LEKGVEPNLADYDKRTALHLASCEGCNEIVVLLLEKGADVNSVDRWGRTVFPICLAALVL 63
           L  G++ NL DYD RT LH+A+ EG   +  LLLE GA V + DRWG T           
Sbjct: 60  LSNGMDANLKDYDYRTPLHVAASEGLIFMAKLLLEAGASVFTKDRWGNT----------- 108

Query: 64  FAYSRHFIGFSFFPHPLSDARSFGHEDICKILE 96
                          PL +AR  G++++ K+LE
Sbjct: 109 ---------------PLDEARMSGNKNLIKLLE 126


>IMGA|Medtr4g137160.1 Protein kinase chr04_pseudomolecule_IMGAG_V3
           33709455-33707249 E EGN_Mt090430 20090702
          Length = 250

 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 26/100 (26%)

Query: 4   LEKGVEPNLADYDKRTALHLASCEGCNEIVVLLLEKGADVNSVDRWGRTVFPICLAALVL 63
           L +G++ N  D D RTALH+A+CEG  ++  LLL + A++++ DRWG T           
Sbjct: 96  LNEGIDVNSIDLDGRTALHIAACEGHVDVAKLLLSRKANLDARDRWGSTA---------- 145

Query: 64  FAYSRHFIGFSFFPHPLSDARSFGHEDICKILESRGGIDP 103
                            +DA+ +G+ ++  IL++RG   P
Sbjct: 146 ----------------AADAKYYGNTEVYYILKARGAKVP 169


>IMGA|Medtr8g119290.1 Cyclic nucleotide-binding
           chr08_pseudomolecule_IMGAG_V3 27002951-26996130 E
           EGN_Mt090430 20090702
          Length = 888

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%)

Query: 5   EKGVEPNLADYDKRTALHLASCEGCNEIVVLLLEKGADVNSVDRWGRTVF 54
           ++G+EPN +D + RTALH+A+C+G    V+LLL+ GA+ N  D  G    
Sbjct: 539 KRGLEPNESDNNGRTALHIAACKGKENCVLLLLDYGANPNIRDSDGNVAL 588


>IMGA|Medtr3g136490.1 Cyclic nucleotide-binding
           chr03_pseudomolecule_IMGAG_V3 34464959-34459508 H
           EGN_Mt090430 20090702
          Length = 884

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 30/106 (28%)

Query: 4   LEKGVEPNLADYDKRTALHLASCEGCNEIVVLLLEKGADVNSVDRWGRTVFPICLAALVL 63
           L+KG +PN  D + RTALH+++  G    V LLL+ GAD N+ D  G             
Sbjct: 556 LKKGSDPNETDRNGRTALHISASNGNESFVTLLLKFGADPNAKDLDGNI----------- 604

Query: 64  FAYSRHFIGFSFFPHPLSDARSFGHEDICKILESRGGIDPIDYWCL 109
                          PL +A   GHE + K+L  +G     D +C+
Sbjct: 605 ---------------PLWEAMIGGHESVKKMLIDKGA----DIFCV 631