Jatropha Genome Database

JcCA0141501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0141501.10 + phase: 2 /partial
         (103 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g014590.1 Peptidase M20 chr05_pseudomolecule_IMGAG_V3...   176   2e-45

>IMGA|Medtr5g014590.1 Peptidase M20 chr05_pseudomolecule_IMGAG_V3
           4709355-4713847 E EGN_Mt090430 20090702
          Length = 439

 Score =  176 bits (447), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/103 (80%), Positives = 94/103 (91%)

Query: 1   IADVKNKLQEYVDDINENIEKLDTRGPVSKYILPDENLRGSLTLTFEEAMSGVACDLESR 60
           + DV  KLQEYVD+INENI KL++RGPVSKY L DENLRGSLTLTF+EA SGVAC+L+SR
Sbjct: 303 VKDVMKKLQEYVDEINENIHKLESRGPVSKYALSDENLRGSLTLTFDEANSGVACNLDSR 362

Query: 61  GFHVLCKATEKVVGHVKPYSITGSLPLIRELQDEGFDVQTAGY 103
           GFHVLCKATE++VGHVKP+SITGSLPLIREL+DEGFDVQ  GY
Sbjct: 363 GFHVLCKATEEIVGHVKPFSITGSLPLIRELKDEGFDVQCCGY 405