Jatropha Genome Database

JcCA0141181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0141181.10 + phase: 0 /partial
         (458 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g130620.1 Carotenoid oxygenase chr03_pseudomolecule_I...   848   0.0  
IMGA|Medtr5g025270.1 Carotenoid oxygenase chr05_pseudomolecule_I...   105   7e-23
IMGA|Medtr5g025250.1 Carotenoid oxygenase chr05_pseudomolecule_I...    95   9e-20
IMGA|Medtr5g025290.1 Carotenoid oxygenase chr05_pseudomolecule_I...    87   2e-17
IMGA|Medtr7g040830.1 Carotenoid oxygenase chr07_pseudomolecule_I...    55   8e-08

>IMGA|Medtr3g130620.1 Carotenoid oxygenase
           chr03_pseudomolecule_IMGAG_V3 33198267-33194913 E
           EGN_Mt090430 20090702
          Length = 565

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/458 (85%), Positives = 436/458 (95%)

Query: 1   KGTYLRNGPGLWHIGDYKFRHLFDGYATLVKLHFENGRLMAGHRQVESEAYKAAKKNKKL 60
           KGTY+RNGPG+W+IGDY FRHLFDGYATLV LHFE+GRL+AGHRQVES+AY+AAKKN+K+
Sbjct: 108 KGTYIRNGPGMWNIGDYNFRHLFDGYATLVGLHFEDGRLVAGHRQVESQAYQAAKKNQKI 167

Query: 61  CYREFSEAPKPDNFLAYIGDLANLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIIID 120
           CYREFSE PK +NFLAY+G+LANLFSG+SLTDNANTGVVKLGDGRVVCLTETQKGSI+ID
Sbjct: 168 CYREFSEVPKAENFLAYVGELANLFSGSSLTDNANTGVVKLGDGRVVCLTETQKGSIVID 227

Query: 121 PDTLDTIGKFEFTDSLGGLIHSAHPIVTDTEFLTLLPDLIRPGYLVVRMAPGSNERKVIG 180
           PDTL+TIGKF+++DSLGGLIHSAHPIVTD EFLTL+PDL++PGYLV RM PGSNERKVIG
Sbjct: 228 PDTLETIGKFDYSDSLGGLIHSAHPIVTDNEFLTLIPDLVKPGYLVARMEPGSNERKVIG 287

Query: 181 RVDCRGGPAPGWVHSFPVTEHYVIVPEMPLRYCAANLLKAEPTPLYKFEWHPDSKAFMHV 240
           RVDCRGG +PGWVHSFPVTEHYVIVPEMPLRYCA NLL+AEPTPLYKF+WHP+SKAFMHV
Sbjct: 288 RVDCRGGTSPGWVHSFPVTEHYVIVPEMPLRYCAQNLLRAEPTPLYKFQWHPESKAFMHV 347

Query: 241 MCKASGKIVASVEVPLYVTFHFINAYEEKDEDGRVKAVIADCCEHSADTTILEKLRLQNL 300
           MCK SGKIVASVEVPL+VTFHFINAYEE+DEDGRV AVIADCCEH+++T IL+KLRLQNL
Sbjct: 348 MCKTSGKIVASVEVPLFVTFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILDKLRLQNL 407

Query: 301 RSFGGVDVLPDARVGRFTIPLDGSPYGKLEAALDPDEHGRGMDMCSFNPSFLGKKYRYAY 360
           RSF G DVLPDARVGRF IPLDGSPYG L+AALDP+EHG+GMDMCS NP++LG KYRYAY
Sbjct: 408 RSFNGEDVLPDARVGRFRIPLDGSPYGTLDAALDPNEHGKGMDMCSINPNYLGLKYRYAY 467

Query: 361 ACGAQRPCNFPNTLTKIDLVKKKAKNWHDEGAVPSEPLFVTRPGATEEDDGVVISIISEK 420
           ACGAQRPCNFPNTLTKIDL  ++AKNW++EGAVPSEP FV RPGAT+EDDGVVISIISEK
Sbjct: 468 ACGAQRPCNFPNTLTKIDLQSERAKNWYEEGAVPSEPFFVPRPGATKEDDGVVISIISEK 527

Query: 421 NGDGYALLLDGSTFEEIARAKFPYGLPYGLHGCWVPKK 458
           NG+GYAL+LDGSTFEEIARAKFPYGLPYGLHGCWVPK+
Sbjct: 528 NGEGYALVLDGSTFEEIARAKFPYGLPYGLHGCWVPKQ 565


>IMGA|Medtr5g025270.1 Carotenoid oxygenase
           chr05_pseudomolecule_IMGAG_V3 10102084-10100345 E
           EGN_Mt090430 20090702
          Length = 579

 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 210/489 (42%), Gaps = 86/489 (17%)

Query: 2   GTYLRNGPGLWHI--GDYKFRHLFDGYATLVKLHFENGRLMAGHRQVESEAYKAAKK-NK 58
           G Y+RNGP    +  G Y   HLFDG   L  +   NG+     R V++  YK   +   
Sbjct: 131 GVYIRNGPNPQFLPRGPY---HLFDGDGMLHAVKITNGKATLCSRYVQTYKYKIENEAGY 187

Query: 59  KLCYREFSEAPKPDNFLAYIG-------DLANLFSGASLTDNA----NTGVVKLGDGRVV 107
           ++    FS       F + IG        +A + +G     N     NT +   G+ R+ 
Sbjct: 188 QILPNVFS------GFNSLIGLAARGSVAVARVLTGQYNPINGIGLINTSLALFGN-RLF 240

Query: 108 CLTETQ-KGSIIIDPD-TLDTIGKFEFTDSLGGLIHSAHP-IVTDT-EFLTLLPDLIRPG 163
            L E+     I + P+  + TIG+++F   L  +  +AHP I +DT E       LIRP 
Sbjct: 241 ALGESDLPYEIKVTPNGDIQTIGRYDFNGKLF-MNMTAHPKIDSDTGECFAYRYGLIRPF 299

Query: 164 YLVVRMAPGSNERKVIGRVDCRGGPAPGWVHSFPVTEHYVIVPEMPLRYCAANLL----- 218
               R      +   +     +    P ++H F +T+ Y +  ++ L     +++     
Sbjct: 300 LTYFRFDSNGVKHNDVPVFSMK---RPSFLHDFAITKKYALFADIQLEINPLDMIFGGSP 356

Query: 219 -KAEPTPLYKFEWHP---DSKAFMHVMCKASGKIVASVEVPLYVTFHFINAYEEKDEDGR 274
            +++P+ + +    P   D+++ M              +VP     H INA++E  EDG+
Sbjct: 357 VRSDPSKVPRIGILPRYADNESKMKWF-----------DVPGLNIMHLINAWDE--EDGK 403

Query: 275 VKAVIAD---CCEHSADTTILEKLRLQNLRSFGGVDVLPDARVGRFTIPLDGSPYGKLEA 331
              ++A    C EH     ++E+L L +       +++   R+   T  +   P      
Sbjct: 404 TVTIVAPNILCVEH-----MMERLELIH-------EMIEKVRINVETGIVTRQPLS---- 447

Query: 332 ALDPDEHGRGMDMCSFNPSFLGKKYRYAYACGAQRPCNFPNTLTKIDLVKKKAK--NWHD 389
                   R +D+   N  FLGKK+R+ YA        F + + KID++K +      + 
Sbjct: 448 -------ARNLDLAVINNEFLGKKHRFIYAAIGNPMPKF-SGVVKIDVLKGEEVGCRLYG 499

Query: 390 EGAVPSEPLFVTRPGATEEDDGVVISII-SEKNGDGYALLLDGST--FEEIARAKFPYGL 446
           E     EP FV R    EEDDG ++S +  EK G+   L++D  +  FE +A  K P  +
Sbjct: 500 EDCYGGEPFFVAREDGEEEDDGYLVSYVHDEKKGESRFLVMDAKSPEFEIVAEVKLPRRV 559

Query: 447 PYGLHGCWV 455
           PYG HG +V
Sbjct: 560 PYGFHGLFV 568


>IMGA|Medtr5g025250.1 Carotenoid oxygenase
           chr05_pseudomolecule_IMGAG_V3 10093326-10091325 E
           EGN_Mt090430 20090702
          Length = 578

 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 202/483 (41%), Gaps = 74/483 (15%)

Query: 2   GTYLRNGPGLWHI--GDYKFRHLFDGYATLVKLHFENGRLMAGHRQVESEAYKAAKK-NK 58
           G Y+RNGP    +  G Y   HLFDG   L  +   NG+     R V++  YK   K   
Sbjct: 130 GAYIRNGPNPQFLPRGPY---HLFDGDGMLHAITISNGKATLCSRYVKTYKYKIENKAGH 186

Query: 59  KLCYREFSEAPKPDNFLAYIGD----LANLFSGASLTDN----ANTGVVKLGDGRVVCLT 110
           +L    FS     ++ +A        +A + +G     N     NT +   G+ R+  L 
Sbjct: 187 QLIPNVFSGF---NSLIALAARGSVVVARVLTGQYNPSNGIGLVNTSLALFGN-RLFALG 242

Query: 111 ETQ-KGSIIIDPD-TLDTIGKFEFTDSLGGLIHSAHP-IVTDT-EFLTLLPDLIRPGYLV 166
           E+     + + P+  + T+G+++F   L  +  +AHP I +DT E        IRP    
Sbjct: 243 ESDLPYEVKLTPNGDIQTMGRYDFNGKLL-MSMTAHPKIDSDTSECFAFRYGPIRPFLTY 301

Query: 167 VRMAPGSNERKVIGRVDCRGGPAPGWVHSFPVTEHYVIVPEMPLRYCAANLL------KA 220
            R      +   +     +    P ++H F +T+ Y +  ++ L      ++      ++
Sbjct: 302 FRFDSNGVKHNDVPVFSMK---RPSFLHDFAITKKYAVFADIQLEMNPLGMIFGGSPVRS 358

Query: 221 EPTPLYKFEWHPDSKAFMHVMCKASGKIVASVEVPLYVTFHFINAYEEKDEDGRVKAVIA 280
           +P+ + +    P        M           +VP +   H INA++E  EDG    ++A
Sbjct: 359 DPSKVSRIGILPRYANDESKM--------KWFDVPGFNIMHTINAWDE--EDGGTVTLVA 408

Query: 281 D---CCEHSADTTILEKLRLQNLRSFGGVDVLPDARVGRFTIPLDGSPYGKLEAALDPDE 337
                 +H     ++E++ L +        ++   R+   T  +   P            
Sbjct: 409 TNILSVQH-----VMERMDLIHA-------MIEKVRINVETGLVTRQPLS---------- 446

Query: 338 HGRGMDMCSFNPSFLGKKYRYAYACGAQRPCNFPNTLTKIDLVKKKAK--NWHDEGAVPS 395
             R +D+   N  FLGKK R+ YA        F + + KID++K +      + EG    
Sbjct: 447 -ARNLDLAVINNDFLGKKSRFVYAAIGNPMPKF-SGVVKIDVLKGEEVGCRLYGEGCYGG 504

Query: 396 EPLFVTRPGATEEDDGVVISII-SEKNGDGYALLLDGST--FEEIARAKFPYGLPYGLHG 452
           EP FV   G  EEDDG ++S +  EK G+   L++D  +  FE +A  K P  +PYG HG
Sbjct: 505 EPFFVAMEGGEEEDDGYLVSYVHDEKKGESKFLVMDAKSPEFEIVAEVKLPRRVPYGFHG 564

Query: 453 CWV 455
            +V
Sbjct: 565 LFV 567


>IMGA|Medtr5g025290.1 Carotenoid oxygenase
           chr05_pseudomolecule_IMGAG_V3 10116366-10118405 E
           EGN_Mt090430 20090702
          Length = 581

 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 200/487 (41%), Gaps = 79/487 (16%)

Query: 1   KGTYLRNGPGLWHI--GDYKFRHLFDGYATLVKLHFENGRLMAGHRQVESEAYKAAKK-N 57
            G Y+RNGP    +  G Y   HLFDG   L  +   NG+     R V++  YK   +  
Sbjct: 131 NGVYIRNGPNPQFLPRGPY---HLFDGDGMLHAITISNGKATLCSRYVQTYKYKIENEAG 187

Query: 58  KKLCYREFSEAPKPDNFLAYIGDLAN-------LFSGASLTDN----ANTGVVKLGDGRV 106
            +L    FS       F + I   A        + SG     N    ANT +   G+ ++
Sbjct: 188 YQLIPNVFS------GFNSLIASAARGSVTAARVISGQYNPSNGIGLANTSLALFGN-KL 240

Query: 107 VCLTETQ-KGSIIIDPD-TLDTIGKFEFTDSLGGLIHSAHP-IVTDT-EFLTLLPDLIRP 162
             L E+     I + P+  + TIG+++F   L  +  +AHP I  DT E        + P
Sbjct: 241 FALGESDLPYEINLTPNGDIQTIGRYDFNGKLS-MSMTAHPKIDGDTGETFAFRYGPMPP 299

Query: 163 GYLVVRM-APGSNERKVIGRVDCRGGPAPGWVHSFPVTEHYVIVPEMPLRYCAANLLK-- 219
                R  A G     V      R    P ++H F +T+ Y +  ++ L     +++   
Sbjct: 300 FLTYFRFDANGVKHNDVPVFSMTR----PSFLHDFAITKKYAVFTDIQLGMNPLDMISGG 355

Query: 220 ----AEPTPLYKFEWHPDSKAFMHVMCKASGKIVASVEVPLYVTFHFINAYEEKDEDGRV 275
               ++P+ + +    P   +    M           +VP +   H IN+++ +D++  V
Sbjct: 356 SPVGSDPSKVSRIGILPRYASDESKM--------KWFDVPGFNIMHAINSWDGEDDEETV 407

Query: 276 KAVIADC--CEHSADTTILEKLRLQNLRSFGGVDVLPDARVGRFTIPLDGSPYGKLEAAL 333
             +  +    EH+     +E+L L +            A + +  I +      +   + 
Sbjct: 408 TLIAPNVLSIEHT-----MERLELVH------------AMIEKVKINIKTGIVSRQPLS- 449

Query: 334 DPDEHGRGMDMCSFNPSFLGKKYRYAYACGAQRPCNFPNTLTKIDLVKKKAK--NWHDEG 391
                 R +D    N  ++GKK R+ YA     P    + + KID++K +      + EG
Sbjct: 450 -----ARNLDFAVINGDYMGKKNRFVYAA-IGNPMPKISGVVKIDVLKGEEVGCRLYGEG 503

Query: 392 AVPSEPLFVTRPGATEEDDGVVISII-SEKNGDGYALLLDGST--FEEIARAKFPYGLPY 448
               EP FV R    EEDDG ++S +  EK G+   L++D  +  FE +A  K P  +PY
Sbjct: 504 CYGGEPFFVAREDGEEEDDGYLVSYVHDEKKGESKFLVMDAKSPEFEIVAEVKLPRRVPY 563

Query: 449 GLHGCWV 455
           G HG +V
Sbjct: 564 GFHGLFV 570


>IMGA|Medtr7g040830.1 Carotenoid oxygenase
           chr07_pseudomolecule_IMGAG_V3 10149889-10155418 E
           EGN_Mt090430 20090702
          Length = 621

 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 32/228 (14%)

Query: 252 VEVPLYV-TFHFINAYEEKDEDGRVKAVI-ADCCEHSADTTILEKLRLQNLRS------- 302
           +EVP  +   H  NA+E K   G ++  I A  C +        KL   N ++       
Sbjct: 394 LEVPSQLWLLHVGNAFEVKQAHGNLEIQIQASACSYQWFN--FRKLFGYNWQTQKLDPSI 451

Query: 303 --FGGVDVLPDARVGRFTIPLDGSPYGKLEAALDP-DEHGRGMDMCSFNPSFLGKKYRYA 359
               G + LP   + + +I LD S Y   E  + P ++  +  D  + NPSF GK+ +Y 
Sbjct: 452 MNVKGENALP--HLVQVSIKLD-SDYNCQECDVKPINKWKKSADFPATNPSFSGKQNKYL 508

Query: 360 YAC---GAQRPC-NFP-NTLTKIDLVKKKAKNWH-DEGAVPSEPLFVTRPGATEEDDGVV 413
           YA    G+++   +FP +T+ K DLV    K W         EP+FV  P   EEDDG +
Sbjct: 509 YAATTLGSRKTLPSFPFDTIVKFDLVNNSVKAWTAGSRKFVGEPIFV--PKGEEEDDGYL 566

Query: 414 ISIISEKNGDGYALLL-----DGSTFEEIARAKFPYGL--PYGLHGCW 454
           + +    +     L++      G+    +AR + P  L  P G HG W
Sbjct: 567 LVVEYATSMQRCCLVILNPKEIGTKKALVARIEIPMHLNFPLGFHGLW 614