Jatropha Genome Database
- JcCA0140861.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0140861.10 - phase: 0 /pseudo/partial
(140 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g121920.1 Zinc finger, DHHC-type chr04_pseudomolecule... 226 4e-60
IMGA|Medtr4g121920.2 Zinc finger, DHHC-type chr04_pseudomolecule... 216 2e-57
IMGA|Medtr8g122240.1 Zinc finger, DHHC-type chr08_pseudomolecule... 182 4e-47
IMGA|Medtr7g139870.1 Zinc finger, DHHC-type chr07_pseudomolecule... 85 1e-17
IMGA|Medtr7g105170.1 Zinc finger, DHHC-type chr07_pseudomolecule... 77 2e-15
IMGA|Medtr7g105150.1 Zinc finger, DHHC-type chr07_pseudomolecule... 77 2e-15
IMGA|Medtr1g124850.1 Zinc finger, DHHC-type chr01_pseudomolecule... 76 4e-15
IMGA|Medtr7g096550.1 Zinc finger, DHHC-type chr07_pseudomolecule... 75 1e-14
IMGA|Medtr5g023180.1 Zinc finger, DHHC-type chr05_pseudomolecule... 67 2e-12
IMGA|Medtr1g120410.1 Zinc finger, DHHC-type chr01_pseudomolecule... 67 4e-12
IMGA|Medtr4g116010.1 Zinc finger, DHHC-type chr04_pseudomolecule... 64 2e-11
IMGA|Medtr3g150990.1 Zinc finger, DHHC-type chr03_pseudomolecule... 64 3e-11
IMGA|Medtr5g045820.1 Zinc finger, DHHC-type chr05_pseudomolecule... 63 5e-11
IMGA|Medtr1g105750.1 Zinc finger, DHHC-type chr01_pseudomolecule... 62 7e-11
IMGA|Medtr5g045820.2 Zinc finger, DHHC-type chr05_pseudomolecule... 60 3e-10
IMGA|Medtr4g101410.1 Zinc finger, DHHC-type chr04_pseudomolecule... 59 6e-10
IMGA|Medtr4g103680.1 Zinc finger, DHHC-type chr04_pseudomolecule... 59 9e-10
IMGA|Medtr4g024940.1 Zinc finger, DHHC-type chr04_pseudomolecule... 56 5e-09
IMGA|Medtr7g145890.1 Zinc finger, DHHC-type chr07_pseudomolecule... 55 1e-08
IMGA|Medtr3g160020.1 Zinc finger, DHHC-type chr03_pseudomolecule... 55 1e-08
>IMGA|Medtr4g121920.1 Zinc finger, DHHC-type
chr04_pseudomolecule_IMGAG_V3 28743302-28750995 E
EGN_Mt090430 20090702
Length = 540
Score = 226 bits (575), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 103/131 (78%), Positives = 114/131 (87%)
Query: 10 TVFLAPNLPKVTAVVGLWGFTALSLAVVSLIMFYRCSSRDPGFIKRLEDLGKDADIEDPL 69
+V APNL K+TAVVG W + ALS +V SLIMFYRCSSRDPG+I+R DLG + EDPL
Sbjct: 287 SVVAAPNLKKITAVVGFWSWIALSSSVGSLIMFYRCSSRDPGYIRRPGDLGTLNETEDPL 346
Query: 70 LNIDLNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKR 129
LNI+LN SS+W GNWSQLCPTCKIIRPVRSKHC TCKRCVEQFDHHCPWISNCVGKRNKR
Sbjct: 347 LNIELNSSSVWTGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKR 406
Query: 130 DFFIFLCLGTL 140
DFFIF+CLGT+
Sbjct: 407 DFFIFICLGTI 417
>IMGA|Medtr4g121920.2 Zinc finger, DHHC-type
chr04_pseudomolecule_IMGAG_V3 28746630-28750995 E
EGN_Mt090430 20090702
Length = 298
Score = 216 bits (551), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/131 (77%), Positives = 113/131 (86%), Gaps = 1/131 (0%)
Query: 10 TVFLAPNLPKVTAVVGLWGFTALSLAVVSLIMFYRCSSRDPGFIKRLEDLGKDADIEDPL 69
+V APNL K+TAVVG W + ALS +V SLIMFYRCS RDPG+I+R DLG + EDPL
Sbjct: 46 SVVAAPNLKKITAVVGFWSWIALSSSVGSLIMFYRCS-RDPGYIRRPGDLGTLNETEDPL 104
Query: 70 LNIDLNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKR 129
LNI+LN SS+W GNWSQLCPTCKIIRPVRSKHC TCKRCVEQFDHHCPWISNCVGKRNKR
Sbjct: 105 LNIELNSSSVWTGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKR 164
Query: 130 DFFIFLCLGTL 140
DFFIF+CLGT+
Sbjct: 165 DFFIFICLGTI 175
>IMGA|Medtr8g122240.1 Zinc finger, DHHC-type
chr08_pseudomolecule_IMGAG_V3 28532611-28540494 F
EGN_Mt090430 20090702
Length = 642
Score = 182 bits (463), Expect = 4e-47, Method: Composition-based stats.
Identities = 76/132 (57%), Positives = 100/132 (75%)
Query: 6 SYSFTVFLAPNLPKVTAVVGLWGFTALSLAVVSLIMFYRCSSRDPGFIKRLEDLGKDADI 65
+Y +V LA N+PK+TA GL+ + + LA V L+MFYRCSS+DPG+I+ ++
Sbjct: 296 TYIHSVILATNMPKLTASAGLFAWFGVLLATVGLVMFYRCSSKDPGYIRTNGHDTQNMKD 355
Query: 66 EDPLLNIDLNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGK 125
++PLL I+ N ++ GNWSQLC TCKI+RP+R+KHCSTC RCVEQFDHHCPW+SNC+GK
Sbjct: 356 DEPLLKIEKNNPALLAGNWSQLCATCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGK 415
Query: 126 RNKRDFFIFLCL 137
+NK DFF FL L
Sbjct: 416 KNKWDFFAFLIL 427
>IMGA|Medtr7g139870.1 Zinc finger, DHHC-type
chr07_pseudomolecule_IMGAG_V3 33561616-33566744 E
EGN_Mt090430 20090702
Length = 393
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 11/107 (10%)
Query: 29 FTALSLAVVSLIMFYRCSSRDPGFIKRLEDLGKDADIEDPLLNIDLNYSSIWMGNWSQLC 88
+T+ A V +++F S DPG IK E++ + P NI + + C
Sbjct: 114 YTSFFAAAVGILLFLLTSFTDPGTIKA-ENVSQYLA-AYPYDNIIFS---------KKEC 162
Query: 89 PTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFL 135
TCKI +P RSKHCS C RCV +FDHHC W++NC+G+RN R F FL
Sbjct: 163 STCKIPKPARSKHCSICDRCVARFDHHCGWMNNCIGERNTRYFMAFL 209
>IMGA|Medtr7g105170.1 Zinc finger, DHHC-type
chr07_pseudomolecule_IMGAG_V3 24050085-24043920 H
EGN_Mt090430 20090702
Length = 414
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 29 FTALSLAVVSLIMFYRCSSRDPGFIKRLEDLGKDAD-----------IEDPLLNIDLNYS 77
F + L ++ + S RDPG I R L + + + + N+ L
Sbjct: 90 FGGVFLTILDFTFLFMTSGRDPGIIPRNSQLPESDESCHTNSQSMEWVNNKTPNLKLPRV 149
Query: 78 SIWMGNWS----QLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFI 133
M N + C TC + RP R+ HCS C CV++FDHHCPW+ C+G RN F +
Sbjct: 150 KDVMVNGHTVKVKFCDTCLLYRPPRASHCSICNNCVQKFDHHCPWVGQCIGSRNYPFFIM 209
Query: 134 FLCLGTL 140
F+ TL
Sbjct: 210 FISSSTL 216
>IMGA|Medtr7g105150.1 Zinc finger, DHHC-type
chr07_pseudomolecule_IMGAG_V3 24039542-24036352 E
EGN_Mt090430 20090702
Length = 459
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 34 LAVVSLIMFYRCSSRDPGFIKRLE---DLGKDADIEDPLL--------NIDLNYSSIWMG 82
L ++ + S RDPG I R D +I P + ++ L + +
Sbjct: 96 LTILDFLFLLLTSGRDPGIIPRNSTPPDYDDAFNIPTPSMEWINGSTPHLKLPRTKDVLV 155
Query: 83 NWS----QLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLG 138
N + C TC + RP R+ HCS C CV++FDHHCPW+ C+G+RN R FF+F+
Sbjct: 156 NGHTVKVKFCDTCLLYRPPRTSHCSICNNCVQRFDHHCPWVGQCIGRRNYRYFFMFISTS 215
Query: 139 TL 140
T+
Sbjct: 216 TI 217
>IMGA|Medtr1g124850.1 Zinc finger, DHHC-type
chr01_pseudomolecule_IMGAG_V3 27338225-27342272 E
EGN_Mt090430 20090702
Length = 422
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 16/147 (10%)
Query: 9 FTVFLAPNLPKVTAVVGLWGFTALSLAVV----SLIMFYRCSSRDPGFIKRLEDLGKD-- 62
F VF+A +L + G+ L +A++ L++ S+RDPG I R ++
Sbjct: 45 FCVFVARHLRHAFSSY-YSGYAILVVAILFTIHVLVLLCFTSARDPGIIPRNSHPPEEEF 103
Query: 63 -------ADIEDPLLNIDLNYSSIWMGNWSQL--CPTCKIIRPVRSKHCSTCKRCVEQFD 113
A + P L + G ++ C TC + RP R HCS C CVE+FD
Sbjct: 104 RYESSTVAGQQTPSLQFPRTKEVMVNGLPVKVKYCETCMLYRPPRCSHCSICNNCVERFD 163
Query: 114 HHCPWISNCVGKRNKRDFFIFLCLGTL 140
HHCPW+ C+G RN R FF+F+ T+
Sbjct: 164 HHCPWVGQCIGLRNYRYFFMFVSSATI 190
>IMGA|Medtr7g096550.1 Zinc finger, DHHC-type
chr07_pseudomolecule_IMGAG_V3 21602023-21596056 E
EGN_Mt090430 20090702
Length = 433
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 17/136 (12%)
Query: 9 FTVFLAPNLPKVTAVVGLWGFTALSLAVV----SLIMFYRCSSRDPGFIKR------LED 58
F VF+A L + WG +++AV+ L++ S RDPG I R E
Sbjct: 60 FCVFVARKL--LNDFSDHWGIPIMAVAVIFTIYDLVLLLLTSGRDPGIIPRNAHPPEPEG 117
Query: 59 LGKDADI---EDPLLNID--LNYSSIWMGNWSQLCPTCKIIRPVRSKHCSTCKRCVEQFD 113
+AD+ + P L + + + C TC + RP R HCS C CVE+FD
Sbjct: 118 FDNNADVGAGQTPQLRLPRIKEVEVNGVVVKVKYCDTCMLYRPPRCSHCSICNNCVERFD 177
Query: 114 HHCPWISNCVGKRNKR 129
HHCPW+ C+G RN R
Sbjct: 178 HHCPWVGQCIGLRNYR 193
>IMGA|Medtr5g023180.1 Zinc finger, DHHC-type
chr05_pseudomolecule_IMGAG_V3 9091300-9098561 E
EGN_Mt090430 20090702
Length = 345
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 39/150 (26%)
Query: 29 FTALSLA--VVSLIMFYRCSSRDPGFI---------KRLEDLGKDADIEDPLLNIDLNYS 77
+TAL L VV+L+ ++ S +PG++ K + P L + ++
Sbjct: 71 YTALYLLLFVVTLVQYFATSVSNPGYVLDAMMEINKKNVVHTKTPETSNQPALGKNGSFV 130
Query: 78 SIWMGN-------------WSQL---------------CPTCKIIRPVRSKHCSTCKRCV 109
GN WS+L C C + +P R+KHC C +CV
Sbjct: 131 ISMEGNQTGKCVAGSNATYWSKLVAELYPPASTIRTWTCTYCNVEQPPRAKHCHDCDKCV 190
Query: 110 EQFDHHCPWISNCVGKRNKRDFFIFLCLGT 139
QFDHHC W+ NC+G+RN F+ +LC T
Sbjct: 191 LQFDHHCVWLGNCIGQRNHCQFWWYLCEET 220
>IMGA|Medtr1g120410.1 Zinc finger, DHHC-type
chr01_pseudomolecule_IMGAG_V3 25886780-25891985 E
EGN_Mt090430 20090702
Length = 275
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 34 LAVVSLIMFYRCSSRDPGFIKRL---EDLGKDADIEDPLLNIDLNYSSIWMGNWSQLCPT 90
A +SL F+ C DPG + +D+ A+ +D N + + C
Sbjct: 54 FASLSLFSFFLCVLTDPGHVPSSFYPDDVESTANAKD---NAE-----------QKKCDK 99
Query: 91 CKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTL 140
C +P R+ HC C+RCV + DHHC WI+NCVG N + FF F+ TL
Sbjct: 100 CFGYKPPRTHHCRVCRRCVLKMDHHCLWINNCVGYWNYKAFFDFIFYATL 149
>IMGA|Medtr4g116010.1 Zinc finger, DHHC-type
chr04_pseudomolecule_IMGAG_V3 27016000-27019824 E
EGN_Mt090430 20090702
Length = 573
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 88 CPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTL 140
C C++ SKHC C +CV FDHHC W++NC+GKRN FF + L
Sbjct: 133 CSLCEVEVFKYSKHCRVCDKCVNHFDHHCRWLNNCIGKRNYGQFFTLMIAAML 185
>IMGA|Medtr3g150990.1 Zinc finger, DHHC-type
chr03_pseudomolecule_IMGAG_V3 39895378-39898025 E
EGN_Mt090430 20090702
Length = 213
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 39 LIMFYRCSSRDPGFIKR-----LEDL--GKDAD--IEDPLLNIDLNYSSIWMGNWSQL-- 87
LI S RDPG + R L D G D++ ++P ++ + I G ++
Sbjct: 93 LIALILTSGRDPGIVPRNSYPPLPDNYDGSDSNNSEQNPPPHLPRSKEVIVNGIAVRVKY 152
Query: 88 CPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVG 124
C TC + RP R HCS C CVE+FDHHCPW+ C+G
Sbjct: 153 CDTCMLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIG 189
>IMGA|Medtr5g045820.1 Zinc finger, DHHC-type
chr05_pseudomolecule_IMGAG_V3 19214923-19208776 E
EGN_Mt090430 20090702
Length = 634
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 88 CPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTL 140
C C++ SKHC C +CV++FDHHC W++NC+GK+N R+FF + L
Sbjct: 181 CSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKKNYRNFFTLMVAALL 233
>IMGA|Medtr1g105750.1 Zinc finger, DHHC-type
chr01_pseudomolecule_IMGAG_V3 21871602-21873736 E
EGN_Mt090430 20090702
Length = 457
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 88 CPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFL 135
C C SKHC TC RCVE FDHHC W++NC+GK+N FF+ +
Sbjct: 110 CTLCDFEVKKHSKHCRTCNRCVEGFDHHCRWLNNCIGKKNYTTFFLLM 157
>IMGA|Medtr5g045820.2 Zinc finger, DHHC-type
chr05_pseudomolecule_IMGAG_V3 19212862-19208776 E
EGN_Mt090430 20090702
Length = 501
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 88 CPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFF 132
C C++ SKHC C +CV++FDHHC W++NC+GK+N R+FF
Sbjct: 65 CSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKKNYRNFF 109
>IMGA|Medtr4g101410.1 Zinc finger, DHHC-type
chr04_pseudomolecule_IMGAG_V3 22032747-22028742 F
EGN_Mt090430 20090702
Length = 368
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 21/112 (18%)
Query: 31 ALSLAVVSLIMF----YRCSSRDPGFIKRLEDLGKDADIEDPLLNIDLNYSSIWMGNWSQ 86
++LAV ++ F +RC+ P + + D+E NY+
Sbjct: 128 TVTLAVATISSFSLSAFRCAGTPPNLVWGSYPTIGNGDLE--------NYT--------- 170
Query: 87 LCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCLG 138
C C + R+ HC +C +C+ DHHCP+I NCVG N R F FL G
Sbjct: 171 FCHYCSRPKSPRTHHCRSCGKCILNMDHHCPFIGNCVGAANHRSFIAFLISG 222
>IMGA|Medtr4g103680.1 Zinc finger, DHHC-type
chr04_pseudomolecule_IMGAG_V3 22395712-22401718 E
EGN_Mt090430 20090702
Length = 743
Score = 58.5 bits (140), Expect = 9e-10, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 99 SKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDF 131
SKHC +C +CV+ FDHHC W++NCVG++N F
Sbjct: 194 SKHCRSCDKCVDGFDHHCRWLNNCVGQKNYHSF 226
>IMGA|Medtr4g024940.1 Zinc finger, DHHC-type
chr04_pseudomolecule_IMGAG_V3 5819931-5825715 E
EGN_Mt090430 20090702
Length = 292
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 33 SLAVVSLIMFYRCSSRDPGFIKR--LEDLGKDADIEDPLLNIDLNYSSIWMGNWS-QLCP 89
+L V+ L ++ DPG + + ++ EDPL+ + + N + C
Sbjct: 62 ALLVMLLWSYFSVVFIDPGSVPPNWRPTIDEERGEEDPLVGSEFSNVQCDPSNQRIRYCR 121
Query: 90 TCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRN 127
C ++P R HCS C RCV + DHHC W+ NCVG N
Sbjct: 122 KCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALN 159
>IMGA|Medtr7g145890.1 Zinc finger, DHHC-type
chr07_pseudomolecule_IMGAG_V3 34797765-34802481 E
EGN_Mt090430 20090702
Length = 302
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 85 SQLCPTCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGKRNKR 129
+ C C+ +P R HCS C+RCV + DHHC W+ NCVG R +
Sbjct: 119 GRYCTRCQNAKPPRCHHCSICQRCVLKMDHHCIWVVNCVGARTYK 163
>IMGA|Medtr3g160020.1 Zinc finger, DHHC-type
chr03_pseudomolecule_IMGAG_V3 42032651-42027042 E
EGN_Mt090430 20090702
Length = 643
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%), Gaps = 3/39 (7%)
Query: 99 SKHCSTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFLCL 137
SKHC +C +CV+ FDHHC W++NCVG++N + F+CL
Sbjct: 161 SKHCRSCDKCVDGFDHHCRWLNNCVGRKN---YISFVCL 196