Jatropha Genome Database
- JcCA0140001.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0140001.20 - phase: 1 /partial
(116 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr6g041050.1 Chlorophyll A-B binding protein chr06_pseud... 226 2e-60
IMGA|Medtr6g012740.1 Chlorophyll A-B binding protein chr06_pseud... 224 1e-59
IMGA|Medtr5g104980.1 Chlorophyll A-B binding protein chr05_pseud... 209 2e-55
IMGA|Medtr6g012720.1 Chlorophyll A-B binding protein chr06_pseud... 186 2e-48
IMGA|Medtr2g095410.1 Chlorophyll A-B binding protein chr02_pseud... 167 8e-43
IMGA|Medtr6g070180.1 Chlorophyll A-B binding protein chr06_pseud... 110 2e-25
IMGA|Medtr6g070180.2 Chlorophyll A-B binding protein chr06_pseud... 110 2e-25
IMGA|Medtr5g106410.1 Chlorophyll A-B binding protein chr05_pseud... 97 2e-21
IMGA|Medtr5g106420.1 Chlorophyll A-B binding protein chr05_pseud... 97 2e-21
IMGA|CU179634_25.1 Chlorophyll A-B binding protein CU179634.6 90... 93 3e-20
IMGA|Medtr6g012710.1 Chlorophyll A-B binding protein chr06_pseud... 93 4e-20
IMGA|Medtr5g106390.1 Chlorophyll A-B binding protein chr05_pseud... 88 1e-18
IMGA|Medtr4g012910.1 Chlorophyll A-B binding protein chr04_pseud... 84 2e-17
IMGA|Medtr3g147810.1 Chlorophyll A-B binding protein chr03_pseud... 75 6e-15
IMGA|AC233662_10.1 Chlorophyll A-B binding protein AC233662.1 39... 74 3e-14
IMGA|AC233657_17.1 Chlorophyll A-B binding protein AC233657.1 89... 74 3e-14
IMGA|Medtr2g050060.1 Chlorophyll A-B binding protein chr02_pseud... 65 8e-12
IMGA|Medtr3g093420.1 Chlorophyll A-B binding protein chr03_pseud... 63 5e-11
IMGA|Medtr5g106360.1 Chlorophyll A-B binding protein chr05_pseud... 49 8e-07
IMGA|Medtr6g077720.1 Chlorophyll A-B binding protein chr06_pseud... 46 4e-06
IMGA|Medtr6g077650.1 Chlorophyll A-B binding protein chr06_pseud... 46 4e-06
>IMGA|Medtr6g041050.1 Chlorophyll A-B binding protein
chr06_pseudomolecule_IMGAG_V3 8723376-8722408 E
EGN_Mt090430 20090702
Length = 228
Score = 226 bits (576), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/116 (93%), Positives = 113/116 (97%)
Query: 1 SLIHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAEL 60
SL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAF EL
Sbjct: 113 SLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFVEL 172
Query: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 116
KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFV GK
Sbjct: 173 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVLGK 228
>IMGA|Medtr6g012740.1 Chlorophyll A-B binding protein
chr06_pseudomolecule_IMGAG_V3 2389037-2387803 E
EGN_Mt090430 20090702
Length = 265
Score = 224 bits (570), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 105/116 (90%), Positives = 114/116 (98%)
Query: 1 SLIHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAEL 60
SL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLA+DPEAFAEL
Sbjct: 150 SLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 209
Query: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 116
KVKE+KNGRLAMFSMFGFFVQAIVTGKGPL+NLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 210 KVKELKNGRLAMFSMFGFFVQAIVTGKGPLKNLADHIADPVNNNAWAFATNFVPGK 265
>IMGA|Medtr5g104980.1 Chlorophyll A-B binding protein
chr05_pseudomolecule_IMGAG_V3 42142704-42144289 E
EGN_Mt090430 20090702
Length = 265
Score = 209 bits (533), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 109/116 (93%)
Query: 1 SLIHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAEL 60
+LIHAQSILAIWA QVVLMG VEGYRV GGPLGE DP+YPGG+FDPLGLADDP+AFAEL
Sbjct: 150 NLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAEL 209
Query: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 116
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 210 KVKELKNGRLAMFSMFGFFVQAIVTGKGPVQNLYDHVADPVANNAWAYATNFVPGQ 265
>IMGA|Medtr6g012720.1 Chlorophyll A-B binding protein
chr06_pseudomolecule_IMGAG_V3 2381258-2381745 E
EGN_Mt090430 20090702
Length = 98
Score = 186 bits (473), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 95/98 (96%)
Query: 19 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 78
MGAVEGYR+A GPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
Query: 79 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 116
FVQAIVT KGPLENLADH+ADPVN+NAWA+ATNFVPGK
Sbjct: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
>IMGA|Medtr2g095410.1 Chlorophyll A-B binding protein
chr02_pseudomolecule_IMGAG_V3 21788149-21786667 F
EGN_Mt090430 20090702
Length = 264
Score = 167 bits (424), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 98/118 (83%), Gaps = 3/118 (2%)
Query: 1 SLIHAQSILAIWACQVVLMGAVEGYRVAGGP-LGEVTDPIYPGGS-FDPLGLADDPEAFA 58
+L+HAQSILA+ QVVLMG VEG+R+ G P +GE + +YPGG FDPLGLADDP FA
Sbjct: 148 NLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNN-LYPGGQYFDPLGLADDPVTFA 206
Query: 59 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 116
ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DH+ +PV NNAW YAT FVPG
Sbjct: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPGS 264
>IMGA|Medtr6g070180.1 Chlorophyll A-B binding protein
chr06_pseudomolecule_IMGAG_V3 13158930-13155401 E
EGN_Mt090430 20090702
Length = 289
Score = 110 bits (276), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 20 GAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 79
G E YR+ G E+ D +PGG FDPLGLA+DP+ A LKVKEIKNGRLAMF+M GFF
Sbjct: 192 GGAEYYRITNGL--ELEDKFHPGGPFDPLGLANDPDQAAILKVKEIKNGRLAMFAMLGFF 249
Query: 80 VQAIVTGKGPLENLADHLADPVNNN 104
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 250 IQAYVTGEGPVENLAKHLSDPFGNN 274
>IMGA|Medtr6g070180.2 Chlorophyll A-B binding protein
chr06_pseudomolecule_IMGAG_V3 13158930-13155401 E
EGN_Mt090430 20090702
Length = 279
Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 20 GAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 79
G E YR+ G E+ D +PGG FDPLGLA+DP+ A LKVKEIKNGRLAMF+M GFF
Sbjct: 182 GGAEYYRITNGL--ELEDKFHPGGPFDPLGLANDPDQAAILKVKEIKNGRLAMFAMLGFF 239
Query: 80 VQAIVTGKGPLENLADHLADPVNNN 104
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 240 IQAYVTGEGPVENLAKHLSDPFGNN 264
>IMGA|Medtr5g106410.1 Chlorophyll A-B binding protein
chr05_pseudomolecule_IMGAG_V3 42797194-42795053 E
EGN_Mt090430 20090702
Length = 275
Score = 97.1 bits (240), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 32 LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 90
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+QA+VTG GP
Sbjct: 194 LGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPY 253
Query: 91 ENLADHLADPVNNN 104
+NL DHLADPVNNN
Sbjct: 254 QNLLDHLADPVNNN 267
>IMGA|Medtr5g106420.1 Chlorophyll A-B binding protein
chr05_pseudomolecule_IMGAG_V3 42800809-42798320 F
EGN_Mt090430 20090702
Length = 277
Score = 97.1 bits (240), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 32 LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 90
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+QA+VTG GP
Sbjct: 196 LGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPY 255
Query: 91 ENLADHLADPVNNN 104
+NL DHLADPVNNN
Sbjct: 256 QNLLDHLADPVNNN 269
>IMGA|CU179634_25.1 Chlorophyll A-B binding protein CU179634.6
90075-91218 H EGN_Mt090430 20090702
Length = 102
Score = 93.2 bits (230), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 40 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 98
YPGG FDPL L+ DP AF ELKVKEIKNGRLAM + GF+VQA +TGKGP++NL +H++
Sbjct: 29 YPGGVLFDPLNLSKDPMAFEELKVKEIKNGRLAMVAWLGFYVQAALTGKGPVQNLLEHIS 88
Query: 99 DPVNNN 104
DP +NN
Sbjct: 89 DPFHNN 94
>IMGA|Medtr6g012710.1 Chlorophyll A-B binding protein
chr06_pseudomolecule_IMGAG_V3 2379582-2380034 H
EGN_Mt090430 20090702
Length = 51
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 44/45 (97%)
Query: 72 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 116
MFSMFGFFVQAIVTGKGPLENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 1 MFSMFGFFVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPGK 45
>IMGA|Medtr5g106390.1 Chlorophyll A-B binding protein
chr05_pseudomolecule_IMGAG_V3 42787539-42787120 E
EGN_Mt090430 20090702
Length = 94
Score = 87.8 bits (216), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 32 LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 90
LG +P YPGG F+PLG D ++ +LK+KE+KNGRLAM ++ G+FVQA+VT GP
Sbjct: 13 LGGSGEPAYPGGPIFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTRVGPY 72
Query: 91 ENLADHLADPVNNN 104
+N +HLADP NNN
Sbjct: 73 QNFLNHLADPSNNN 86
>IMGA|Medtr4g012910.1 Chlorophyll A-B binding protein
chr04_pseudomolecule_IMGAG_V3 2396066-2393405 E
EGN_Mt090430 20090702
Length = 347
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 7 SILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSF-DPLGLADDPEAFAELKVKEI 65
SI + +V+++G +E R A + +YPGG F DPLGLA DPE A L++ EI
Sbjct: 244 SITTLIWIEVLVIGYIEFQRNAEL---DSEKRLYPGGKFFDPLGLASDPEKKATLQLAEI 300
Query: 66 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 104
K+ RLAM + GF VQA TGKGPL N A HL+DP++
Sbjct: 301 KHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTT 339
>IMGA|Medtr3g147810.1 Chlorophyll A-B binding protein
chr03_pseudomolecule_IMGAG_V3 38374274-38376102 F
EGN_Mt090430 20090702
Length = 267
Score = 75.5 bits (184), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 37 DPIYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 95
+P YPGG +PLGLA D ++ E K+KEIKNGRLAM ++ G FVQA VT GP++NL +
Sbjct: 189 EPGYPGGPLLNPLGLAKDIKSAREWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVE 248
Query: 96 HLADP 100
HL++P
Sbjct: 249 HLSNP 253
>IMGA|AC233662_10.1 Chlorophyll A-B binding protein AC233662.1
39478-42517 E EGN_Mt090430 20090702
Length = 243
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 57/102 (55%), Gaps = 16/102 (15%)
Query: 15 QVVLMGAVEGYRVAG--GPLGEVTDPI------------YPGG-SFDPLGLAD-DPEAFA 58
+++ +G EG R A P TDPI YPGG FDPLG P+
Sbjct: 130 ELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLK 189
Query: 59 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 100
EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 190 ELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 231
>IMGA|AC233657_17.1 Chlorophyll A-B binding protein AC233657.1
89872-86833 E EGN_Mt090430 20090702
Length = 243
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 57/102 (55%), Gaps = 16/102 (15%)
Query: 15 QVVLMGAVEGYRVAG--GPLGEVTDPI------------YPGG-SFDPLGLAD-DPEAFA 58
+++ +G EG R A P TDPI YPGG FDPLG P+
Sbjct: 130 ELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLK 189
Query: 59 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 100
EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP
Sbjct: 190 ELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 231
>IMGA|Medtr2g050060.1 Chlorophyll A-B binding protein
chr02_pseudomolecule_IMGAG_V3 13801877-13799745 E
EGN_Mt090430 20090702
Length = 267
Score = 65.1 bits (157), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 58/113 (51%), Gaps = 16/113 (14%)
Query: 15 QVVLMGAVEGYRVAG--GPLGEVTDPI------------YPGG-SFDPLGLAD-DPEAFA 58
Q+ LMG VEG R A P +P YPGG FDP+ PE
Sbjct: 154 QLALMGWVEGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMQWGRGSPEPVM 213
Query: 59 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 111
L+ KEIKNGRLAM + GF QA+ G P++NL HLADP + N ++ T+
Sbjct: 214 VLRTKEIKNGRLAMLAFLGFCFQAVYVGGSPIDNLMAHLADPGHVNIFSAFTS 266
>IMGA|Medtr3g093420.1 Chlorophyll A-B binding protein
chr03_pseudomolecule_IMGAG_V3 22199885-22197113 E
EGN_Mt090430 20090702
Length = 278
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 11/84 (13%)
Query: 11 IWACQVVLMGAVEGYRVAGGPLGEVTDP---IYPGGSF-DPLGLADDPEAFAELKVKEIK 66
IW +V+++G +E R A DP +YPGG F DPLGLA DPE L++ EIK
Sbjct: 194 IW-IEVLVIGYIEFQRNAE------LDPEKRLYPGGKFFDPLGLASDPEEKERLQLAEIK 246
Query: 67 NGRLAMFSMFGFFVQAIVTGKGPL 90
+ RLAM F +QA VTGKGP+
Sbjct: 247 HSRLAMVVFLIFAIQAAVTGKGPI 270
>IMGA|Medtr5g106360.1 Chlorophyll A-B binding protein
chr05_pseudomolecule_IMGAG_V3 42774357-42768572 E
EGN_Mt090430 20090702
Length = 68
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 56 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 106
+F ELK K + + G FVQ++VTG GP +NL DHLADP NNN +
Sbjct: 20 SFFELKCK-----FECLMEILGDFVQSLVTGVGPYQNLLDHLADPFNNNIF 65
>IMGA|Medtr6g077720.1 Chlorophyll A-B binding protein
chr06_pseudomolecule_IMGAG_V3 15502686-15500374 E
EGN_Mt090430 20090702
Length = 80
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 59 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 103
E K KEI N AM + GF Q VTGKG +NL HL+DP +N
Sbjct: 26 EAKEKEISNVIFAMLAFLGFISQHSVTGKGRFDNLLQHLSDPWHN 70
>IMGA|Medtr6g077650.1 Chlorophyll A-B binding protein
chr06_pseudomolecule_IMGAG_V3 15446513-15448825 E
EGN_Mt090430 20090702
Length = 80
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 59 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 103
E K KEI N AM + GF Q VTGKG +NL HL+DP +N
Sbjct: 26 EAKEKEISNVIFAMLAFLGFISQHSVTGKGRFDNLLQHLSDPWHN 70