Jatropha Genome Database

JcCA0140001.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0140001.10 + phase: 0 /partial
         (268 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g123800.1 Glycosyl transferase, group 1; N-6 Adenine-...   155   2e-38
IMGA|Medtr6g012910.1 Glycosyl transferase, group 1 chr06_pseudom...   154   5e-38
IMGA|Medtr7g037750.1 Protein kinase; Short-chain dehydrogenase/r...    48   5e-06

>IMGA|Medtr3g123800.1 Glycosyl transferase, group 1; N-6
           Adenine-specific DNA methylase
           chr03_pseudomolecule_IMGAG_V3 31238660-31231370 E
           EGN_Mt090430 20090702
          Length = 663

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 14/260 (5%)

Query: 1   GGRGLHSTLNFHAKKFIGILNGIDTDSWNPMTDSFLKVQYSSNDLQGKTENKLAIRRHLG 60
           GG GL   L        GI NGID   W+P +D  +   YS++DL GK + K+A+++ LG
Sbjct: 399 GGFGLQEILRDRKSILSGITNGIDVTEWDPSSDEHIASSYSADDLSGKVKCKIALQKELG 458

Query: 61  LSTADAKRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGS-SPVAH-IQREFEGI 118
           L       P++G + RL  QKG+ LIR AI   ++   QFV+LGS +P+     R  E +
Sbjct: 459 LPVR-PDCPVIGFVGRLDYQKGIDLIRQAIPELMQDDVQFVMLGSGNPIYEDWMRATESL 517

Query: 119 ANHFQNHEHIRLILKYDDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPIARKTG 178
                  +  R  + ++  ++H I A  D+ ++PS FEPCGL Q+ AMRYG+IP+  +TG
Sbjct: 518 YK-----DKFRGWVGFNVPVSHRITAGCDILLMPSTFEPCGLNQLYAMRYGTIPVVHETG 572

Query: 179 GLNDSVFDVDDDAIPLQFR------NGFTFLTPDEQGINGALERAFNYYRNNPEGWQELV 232
           GL D+V + +  A             G+TF    ++ +  AL  A   Y  +   W+ L+
Sbjct: 573 GLRDTVQNFNPFAGGSGAEGCNAEGTGWTFSPLTKESMLVALRYAIQTYNEHKSSWEGLM 632

Query: 233 QKDMNIDFSWESSASQYEDL 252
           ++ M  D++WE +A+QYE +
Sbjct: 633 KRGMTRDYTWEKAAAQYEQI 652


>IMGA|Medtr6g012910.1 Glycosyl transferase, group 1
           chr06_pseudomolecule_IMGAG_V3 2547326-2554167 E
           EGN_Mt090430 20090702
          Length = 758

 Score =  154 bits (389), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 147/261 (56%), Gaps = 20/261 (7%)

Query: 1   GGRGLHSTLNFHAKKFIGILNGIDTDSWNPMTDSFLKVQ----YSSNDLQ-GKTENKLAI 55
           GG GL+  +N +  KF GI+NG+DT  WNP  D  LK +    Y+   LQ GK + K A+
Sbjct: 501 GGWGLNGIINENDWKFRGIVNGVDTKDWNPQFDVHLKSEGYTNYTLETLQTGKRQCKAAL 560

Query: 56  RRHLGLSTADAKRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSS--PVAHIQR 113
           ++ LGL   +   P++  I RL  QKGV LI  AI   +    Q ++LG+    +  + R
Sbjct: 561 QKELGLPVRE-DVPIIAFIGRLDQQKGVDLIGEAIPWMMSHDVQLIMLGTGRPDLEEMLR 619

Query: 114 EFEGIANHFQNHEHIRLILKYDDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPI 173
           +FE     +Q+H+ IR  + +   +AH I A +D+ ++PS FEPCGL Q+ AM YG++P+
Sbjct: 620 QFE-----WQHHDKIRGWVGFSVKMAHRITAGADILLMPSRFEPCGLNQLYAMNYGTVPV 674

Query: 174 ARKTGGLNDSV--FDVDDDAIPLQFRNGFTFLTPDEQGINGALERAFNYYRNNPEGWQEL 231
               GGL D+V  F+  D++       G+TF   +   +  AL      YR+  + W+ +
Sbjct: 675 VHAVGGLRDTVQPFNPFDES-----GVGWTFDRAEANKLKAALWNCILTYRDYKKSWEGI 729

Query: 232 VQKDMNIDFSWESSASQYEDL 252
            ++ M+ D SW+++A QYE++
Sbjct: 730 QRRGMSQDLSWDNAAEQYEEV 750


>IMGA|Medtr7g037750.1 Protein kinase; Short-chain
           dehydrogenase/reductase SDR
           chr07_pseudomolecule_IMGAG_V3 9113483-9112410 E
           EGN_Mt090430 20090702
          Length = 357

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 36/53 (67%)

Query: 122 FQNHEHIRLILKYDDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPIA 174
           F++ + I+ +  YD++L+H ++A SD+ +  S  +P   T + A+RYG++PIA
Sbjct: 3   FEDVDDIKFVRSYDEALSHLLFAGSDIILCQSFHDPTDETPLKALRYGAVPIA 55