Jatropha Genome Database

JcCA0139851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0139851.10 + phase: 0 
         (188 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g009940.1 Protein kinase; Calcium-binding EF-hand chr...    47   5e-06
IMGA|Medtr7g034910.1 Calcium-binding EF-hand chr07_pseudomolecul...    47   7e-06

>IMGA|Medtr5g009940.1 Protein kinase; Calcium-binding EF-hand
           chr05_pseudomolecule_IMGAG_V3 2304419-2310185 E
           EGN_Mt090430 20090702
          Length = 517

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 9   KAYYANLSEKQKRLAKDFFNEMDKDGDGKITFDEYEQRIKPKKGFNPIASSD---FFRKL 65
           K    NLSE++    K+ F  MD D  G ITF+E +  + PK G   I+ S+        
Sbjct: 358 KVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGL-PKLGTK-ISESEVRQLMEAA 415

Query: 66  DKDGNGTLDFDEFVT 80
           D DGNGT+D+ EF+T
Sbjct: 416 DVDGNGTIDYIEFIT 430


>IMGA|Medtr7g034910.1 Calcium-binding EF-hand
          chr07_pseudomolecule_IMGAG_V3 8450028-8448598 E
          EGN_Mt090430 20090702
          Length = 150

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 3/69 (4%)

Query: 15 LSEKQKRLAKDFFNEMDKDGDGKITFDEYEQRIKPKKGFNPIASS--DFFRKLDKDGNGT 72
          LSE+Q    K+ F+  DKDGDG IT +E    I+     NP      D   ++D DGNGT
Sbjct: 5  LSEEQIVDFKEAFSLFDKDGDGCITVEELATVIRSLDQ-NPTEEELQDMISEVDADGNGT 63

Query: 73 LDFDEFVTL 81
          ++FDEF+ L
Sbjct: 64 IEFDEFLNL 72