Jatropha Genome Database

JcCA0139011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0139011.10 - phase: 0 /pseudo/partial
         (244 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g137650.1 NAD-dependent epimerase/dehydratase chr01_p...   316   8e-87
IMGA|Medtr4g069880.1 NAD-dependent epimerase/dehydratase chr04_p...   287   4e-78
IMGA|Medtr4g069590.1 NAD-dependent epimerase/dehydratase chr04_p...   287   4e-78
IMGA|Medtr2g114640.1 NAD-dependent epimerase/dehydratase chr02_p...    63   2e-10
IMGA|Medtr1g108380.1 NAD-dependent epimerase/dehydratase chr01_p...    61   6e-10
IMGA|Medtr8g138600.1 NAD-dependent epimerase/dehydratase chr08_p...    59   2e-09
IMGA|Medtr4g078490.1 NAD-dependent epimerase/dehydratase chr04_p...    57   1e-08
IMGA|Medtr4g078490.2 NAD-dependent epimerase/dehydratase chr04_p...    57   1e-08

>IMGA|Medtr1g137650.1 NAD-dependent epimerase/dehydratase
           chr01_pseudomolecule_IMGAG_V3 30536762-30537934 E
           EGN_Mt090430 20090702
          Length = 372

 Score =  316 bits (809), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 151/193 (78%), Positives = 167/193 (86%), Gaps = 9/193 (4%)

Query: 1   DPAYYILKEDESPCIFGPIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 60
           DPAYY+LKEDESPCIFGPIEKQRWSYACAKQLIERLIY EG E GLEFTIVRPFNWIGPR
Sbjct: 143 DPAYYMLKEDESPCIFGPIEKQRWSYACAKQLIERLIYGEGDEKGLEFTIVRPFNWIGPR 202

Query: 61  MDFIPGIDGPSEGVPRVLACFSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP 120
           MDFIPG+DGPSEGVPRVLACFSN LLR EPLKLVDGG+SQRTF+YIKDAIEAVLLMIENP
Sbjct: 203 MDFIPGVDGPSEGVPRVLACFSNNLLRGEPLKLVDGGESQRTFLYIKDAIEAVLLMIENP 262

Query: 121 ARASGHIFNVGNPHNEVTVRQLAEMMTEVYSKVSGEAALDVPTVDISSKGIF-------- 172
           ARA+G IFNVGNP+NEVTVR+LAEMM +VYSKVSG+  L+ PT+D+SSK  +        
Sbjct: 263 ARANGKIFNVGNPNNEVTVRELAEMMIKVYSKVSGDQPLETPTIDVSSKEFYGEGYDDSD 322

Query: 173 -MVRDMMIVTKEF 184
             + DM I+ K+ 
Sbjct: 323 KRIPDMTIINKQL 335


>IMGA|Medtr4g069880.1 NAD-dependent epimerase/dehydratase
           chr04_pseudomolecule_IMGAG_V3 13442907-13445423 H
           EGN_Mt090430 20090702
          Length = 381

 Score =  287 bits (734), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 138/207 (66%), Positives = 168/207 (81%), Gaps = 10/207 (4%)

Query: 1   DPAYYILKEDESPCIFGPIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 60
           +P YY LKED SPCIFGP+ KQRWSYACAKQ+ +RLIYAE AENGL+FTIVRP+NWIGPR
Sbjct: 153 EPQYYKLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPR 212

Query: 61  MDFIPGIDGPSEGVPRVLACFSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP 120
           MDFIPG+DGPS+GVPRVLACFSN LLR EPLKLVDGG SQRTF+YIKDAIEAV+LMI+NP
Sbjct: 213 MDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGHSQRTFLYIKDAIEAVMLMIDNP 272

Query: 121 ARASGHIFNVGNPHNEVTVRQLAEMMTEVYSKVSGEAALDVPTVDISSKGIF-------- 172
            RA+GHIFNVGNP NEV+V+QLAE+M +VY+KV+G     + T+D+SS+  +        
Sbjct: 273 DRANGHIFNVGNPDNEVSVKQLAELMIKVYAKVAGVPESSLSTLDVSSEVFYGKGYDDSD 332

Query: 173 -MVRDMMIVTKEFQT*P-*SIDNLVGT 197
             + DM I+TK+    P  S+D+L+ +
Sbjct: 333 RRIPDMTIITKQLGWKPKTSLDDLLDS 359


>IMGA|Medtr4g069590.1 NAD-dependent epimerase/dehydratase
           chr04_pseudomolecule_IMGAG_V3 13315393-13317913 H
           EGN_Mt090430 20090702
          Length = 381

 Score =  287 bits (734), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 138/207 (66%), Positives = 168/207 (81%), Gaps = 10/207 (4%)

Query: 1   DPAYYILKEDESPCIFGPIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 60
           +P YY LKED SPCIFGP+ KQRWSYACAKQ+ +RLIYAE AENGL+FTIVRP+NWIGPR
Sbjct: 153 EPQYYKLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPR 212

Query: 61  MDFIPGIDGPSEGVPRVLACFSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP 120
           MDFIPG+DGPS+GVPRVLACFSN LLR EPLKLVDGG SQRTF+YIKDAIEAV+LMI+NP
Sbjct: 213 MDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGHSQRTFLYIKDAIEAVMLMIDNP 272

Query: 121 ARASGHIFNVGNPHNEVTVRQLAEMMTEVYSKVSGEAALDVPTVDISSKGIF-------- 172
            RA+GHIFNVGNP NEV+V+QLAE+M +VY+KV+G     + T+D+SS+  +        
Sbjct: 273 DRANGHIFNVGNPDNEVSVKQLAELMIKVYAKVAGVPESSLSTLDVSSEVFYGKGYDDSD 332

Query: 173 -MVRDMMIVTKEFQT*P-*SIDNLVGT 197
             + DM I+TK+    P  S+D+L+ +
Sbjct: 333 RRIPDMTIITKQLGWKPKTSLDDLLDS 359


>IMGA|Medtr2g114640.1 NAD-dependent epimerase/dehydratase
           chr02_pseudomolecule_IMGAG_V3 27141771-27136077 E
           EGN_Mt090430 20090702
          Length = 351

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++GLE  I R FN  GPRM+   G         RV++ F 
Sbjct: 178 RSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDG---------RVVSNFI 228

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              +R EPL +   G   R+F Y+ D ++ ++ ++E     +G I N+GNP  E T+ +L
Sbjct: 229 AQAIRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLME--GENTGPI-NIGNP-GEFTMTEL 284

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 285 AENVKEL 291


>IMGA|Medtr1g108380.1 NAD-dependent epimerase/dehydratase
           chr01_pseudomolecule_IMGAG_V3 23095639-23089675 E
           EGN_Mt090430 20090702
          Length = 430

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 21/131 (16%)

Query: 23  RWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 80
           R  Y   K+  E L   Y  GA  G+E  I R FN  GPRM    G         RV++ 
Sbjct: 252 RSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVSN 300

Query: 81  FSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHI--FNVGNPHNEVT 138
           F    LR+EPL +   G+  R+F Y+ D +E ++ ++E       H+  FN+GNP  E T
Sbjct: 301 FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFT 354

Query: 139 VRQLAEMMTEV 149
           + +LA+++ E 
Sbjct: 355 MLELAKVVQET 365


>IMGA|Medtr8g138600.1 NAD-dependent epimerase/dehydratase
           chr08_pseudomolecule_IMGAG_V3 33562243-33559526 E
           EGN_Mt090430 20090702
          Length = 423

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 21/131 (16%)

Query: 23  RWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 80
           R  Y   K++ E L   Y  GA  G+E  I R FN  GPRM    G         RV++ 
Sbjct: 245 RSCYDEGKRVAETLAMDYHRGA--GIEVRIARIFNTYGPRMCIDDG---------RVVSN 293

Query: 81  FSNALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHI--FNVGNPHNEVT 138
           F    LR++PL +   G+  R+F ++ D +E ++ ++E       H+  FN+GNP  E T
Sbjct: 294 FVAQALRKDPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFT 347

Query: 139 VRQLAEMMTEV 149
           + +LA+++ E 
Sbjct: 348 MLELAQVVQET 358


>IMGA|Medtr4g078490.1 NAD-dependent epimerase/dehydratase
           chr04_pseudomolecule_IMGAG_V3 15397400-15401318 E
           EGN_Mt090430 20090702
          Length = 345

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++G+E  + R FN  GPRM+   G         RV++ F 
Sbjct: 172 RSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDG---------RVVSNFI 222

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              LR E L +   G   R+F Y+ D ++ ++ ++      +G I N+GNP  E T+ +L
Sbjct: 223 AQALRGESLTVQAPGTQTRSFCYVSDLVDGLIRLMG--GSDTGPI-NLGNP-GEFTMTEL 278

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 279 AETVKEL 285


>IMGA|Medtr4g078490.2 NAD-dependent epimerase/dehydratase
           chr04_pseudomolecule_IMGAG_V3 15397400-15401318 E
           EGN_Mt090430 20090702
          Length = 342

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 13/127 (10%)

Query: 23  RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 82
           R  Y   K++ E L++    ++G+E  + R FN  GPRM+   G         RV++ F 
Sbjct: 169 RSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDG---------RVVSNFI 219

Query: 83  NALLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARASGHIFNVGNPHNEVTVRQL 142
              LR E L +   G   R+F Y+ D ++ ++ ++      +G I N+GNP  E T+ +L
Sbjct: 220 AQALRGESLTVQAPGTQTRSFCYVSDLVDGLIRLMG--GSDTGPI-NLGNP-GEFTMTEL 275

Query: 143 AEMMTEV 149
           AE + E+
Sbjct: 276 AETVKEL 282