Jatropha Genome Database

JcCA0136721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0136721.10 - phase: 0 
         (256 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g132830.1 GroES-like chr08_pseudomolecule_IMGAG_V3 31...   402   e-112
IMGA|Medtr8g132830.2 GroES-like chr08_pseudomolecule_IMGAG_V3 31...   360   e-100
IMGA|AC225518_13.1 GroES-like AC225518.12 38278-37581 E EGN_Mt09...    56   2e-08
IMGA|Medtr8g009080.1 GroES-like chr08_pseudomolecule_IMGAG_V3 11...    49   3e-06
IMGA|Medtr7g106330.1 GroES-like chr07_pseudomolecule_IMGAG_V3 24...    48   5e-06

>IMGA|Medtr8g132830.1 GroES-like chr08_pseudomolecule_IMGAG_V3
           31468379-31470949 E EGN_Mt090430 20090702
          Length = 253

 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/256 (78%), Positives = 231/256 (90%), Gaps = 3/256 (1%)

Query: 1   MATAQLTASSISVTARNLASFEGLRPSTVKFASFGNLKAAGLSQRSFRGLVVKAATVVAP 60
           MAT QLTASSIS   RNL+SFE LR S+++F    N + A L+Q S   +VVKAATVVAP
Sbjct: 1   MATTQLTASSIS--TRNLSSFERLRTSSIQFPR-NNARIAILTQWSLPSMVVKAATVVAP 57

Query: 61  KYTSIKPLGDRVLVKIKVAEEKTEGGILLPTTAQSKPQGGEVVAVGEGKTIGKTKLDISV 120
           K+T++KPLGDRVLVKIK AEEKT+GGILLP+TAQSKPQGGEVVA+G+GKT+GK K+DISV
Sbjct: 58  KHTTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISV 117

Query: 121 KTGAQVIYSKYAGTEVEFNGSPHLILKEDDIVGVLETDDIKDLKPCNDRVFIKVAEAEEK 180
           K GAQV+YSKYAGTEVEF+GS HLILK++DIVG+LET+++KDLKP NDRV IKVAEAEEK
Sbjct: 118 KAGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEK 177

Query: 181 TAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSITPGNTVLYSKYAGNDFKGSDG 240
           TAGGLLLTEA+K+KPSIGTVIAVGPGP+D+EGNRKPLSI PGNTVLYSKYAGNDFKG DG
Sbjct: 178 TAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKYAGNDFKGKDG 237

Query: 241 TNYIALRASDVMAVLS 256
           ++YIALRASDVMA+LS
Sbjct: 238 SDYIALRASDVMAILS 253


>IMGA|Medtr8g132830.2 GroES-like chr08_pseudomolecule_IMGAG_V3
           31468379-31470949 E EGN_Mt090430 20090702
          Length = 207

 Score =  360 bits (924), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/207 (84%), Positives = 199/207 (96%)

Query: 50  LVVKAATVVAPKYTSIKPLGDRVLVKIKVAEEKTEGGILLPTTAQSKPQGGEVVAVGEGK 109
           +VVKAATVVAPK+T++KPLGDRVLVKIK AEEKT+GGILLP+TAQSKPQGGEVVA+G+GK
Sbjct: 1   MVVKAATVVAPKHTTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGK 60

Query: 110 TIGKTKLDISVKTGAQVIYSKYAGTEVEFNGSPHLILKEDDIVGVLETDDIKDLKPCNDR 169
           T+GK K+DISVK GAQV+YSKYAGTEVEF+GS HLILK++DIVG+LET+++KDLKP NDR
Sbjct: 61  TVGKNKVDISVKAGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDR 120

Query: 170 VFIKVAEAEEKTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSITPGNTVLYSK 229
           V IKVAEAEEKTAGGLLLTEA+K+KPSIGTVIAVGPGP+D+EGNRKPLSI PGNTVLYSK
Sbjct: 121 VLIKVAEAEEKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSK 180

Query: 230 YAGNDFKGSDGTNYIALRASDVMAVLS 256
           YAGNDFKG DG++YIALRASDVMA+LS
Sbjct: 181 YAGNDFKGKDGSDYIALRASDVMAILS 207


>IMGA|AC225518_13.1 GroES-like AC225518.12 38278-37581 E
           EGN_Mt090430 20090702
          Length = 97

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 161 KDLKPCNDRVFIKVAEAEEKTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIT 220
           K L P  +R+ ++      KT+ G+LL E + +  S G V+AVGPG  D+ GN  P+S+ 
Sbjct: 3   KRLIPTFNRILVEKIIPPSKTSAGILLPEKTSQLNS-GKVVAVGPGSRDKSGNLIPVSVK 61

Query: 221 PGNTVLYSKYAGNDFKGSDGTNYIALRASDVMAVL 255
            G+ VL  +Y G+  K  D   ++  R  D++ +L
Sbjct: 62  EGDHVLLPEYGGSQIKLDDKEFHL-FRDEDILGIL 95



 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 67  PLGDRVLVKIKVAEEKTEGGILLPTTAQSKPQGGEVVAVGEG-KTIGKTKLDISVKTGAQ 125
           P  +R+LV+  +   KT  GILLP    S+   G+VVAVG G +      + +SVK G  
Sbjct: 7   PTFNRILVEKIIPPSKTSAGILLPEKT-SQLNSGKVVAVGPGSRDKSGNLIPVSVKEGDH 65

Query: 126 VIYSKYAGTEVEFNGSPHLILKEDDIVGVLE 156
           V+  +Y G++++ +     + +++DI+G+L 
Sbjct: 66  VLLPEYGGSQIKLDDKEFHLFRDEDILGILR 96


>IMGA|Medtr8g009080.1 GroES-like chr08_pseudomolecule_IMGAG_V3
           1178839-1182724 F EGN_Mt090430 20090702
          Length = 135

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 15/128 (11%)

Query: 32  ASFGNLKAAGLSQRSFRGLVVKAATVVAPKY--TSIKPLGDRVLVKIKVAEEKTEGGILL 89
           ASF   +   L + S +         +A K+  + + P  DRVL++++   EKT GGILL
Sbjct: 20  ASFSTQRLPILKRNSLK------VNAIAKKWEPSKVVPQADRVLIRLEELSEKTAGGILL 73

Query: 90  PTTAQSKPQGGEVVAVGEGKTIGKTKLDISVKTGAQVIYSKYAGTEVEF-NGSPHLILKE 148
           P +A       E   VGE   +G    +  VK G++V+++     EV+    + H  +K 
Sbjct: 74  PKSAVK----FERYLVGEVLNVGAEAEN--VKAGSKVLFTDINAYEVDLGTDAKHCFIKS 127

Query: 149 DDIVGVLE 156
            D++ V+E
Sbjct: 128 SDLLAVVE 135


>IMGA|Medtr7g106330.1 GroES-like chr07_pseudomolecule_IMGAG_V3
           24559873-24556999 E EGN_Mt090430 20090702
          Length = 105

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 10/99 (10%)

Query: 67  PLGDRVLVKIKVAEEKTEGGILLPTTAQSKPQGGEVVAVGEGKTIGKTK-LDISVKTGAQ 125
           PL +RVLV+  V   KT  GILLP    SK   G+VVAVG G      K L ++VK G  
Sbjct: 7   PLFNRVLVEKIVPPSKTTAGILLPEKI-SKLNSGKVVAVGPGVHGKDGKLLPVAVKEGDT 65

Query: 126 VIYSKYAGTEVEFNGSPHLILKE--------DDIVGVLE 156
           V+  +Y G EV+ +   +  + E        DDI+G L 
Sbjct: 66  VLLPEYGGVEVKLDHKEYSFMSEAEYYLYGDDDILGTLH 104