Jatropha Genome Database

JcCA0136421.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0136421.10 + phase: 0 /partial
         (169 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g108160.1 Carbonic anhydrase, eukaryotic chr07_pseudo...   135   7e-33

>IMGA|Medtr7g108160.1 Carbonic anhydrase, eukaryotic
           chr07_pseudomolecule_IMGAG_V3 25409160-25410839 E
           EGN_Mt090430 20090702
          Length = 270

 Score =  135 bits (341), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 98/159 (61%), Gaps = 5/159 (3%)

Query: 8   GALIIDGKNYKLIQLHWHSPSEHQINGVHYPLELHLVHLAEDGARSVVAVLYKYGPENPF 67
           G L ++G  YKLIQ HWH+PSEH +NG  + +E H VH       +V+ + YK G  +P 
Sbjct: 108 GKLNLNGTYYKLIQCHWHTPSEHTLNGSKFDMEQHCVHQNSKDEIAVIGIWYKIGRPDPL 167

Query: 68  IAKIHNGLGKLAKNEYGNGHVPLEQLDVKPLKKKTSKYFRYIGSLTTPPCTENVIWNVLG 127
           ++K+ N +  +   E   G +    +     K   +KY+RYIGSLT+PPCTE+VIW VL 
Sbjct: 168 LSKLLNHIKSIRDKEIDVGIINPADI----FKFGGTKYYRYIGSLTSPPCTEDVIWTVLK 223

Query: 128 KARTVSKEQVEALKAPLEKAYKHNNRPVQPLNGRKVSLY 166
           K +TVS EQ++ALKA +   ++ N RP Q L+GRKV  Y
Sbjct: 224 KVKTVSVEQLKALKA-VNHGFEENARPTQDLDGRKVWFY 261