Jatropha Genome Database

JcCA0135781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0135781.10 - phase: 0 /partial
         (261 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g115280.1 Asparagine synthase chr04_pseudomolecule_IM...   299   8e-82

>IMGA|Medtr4g115280.1 Asparagine synthase
           chr04_pseudomolecule_IMGAG_V3 26646112-26637256 E
           EGN_Mt090430 20090702
          Length = 646

 Score =  299 bits (766), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 157/277 (56%), Positives = 188/277 (67%), Gaps = 23/277 (8%)

Query: 1   DSSKTLWFGRDAFGRRSLLVHWPTVKDPQFMLSSVSPFSAVDQSSGADLGVEDCTEPNFW 60
           DSS+TLWFGRDAFGRRSLLVHWPT  D  F+LSSVSP  A DQ +  +         ++W
Sbjct: 180 DSSRTLWFGRDAFGRRSLLVHWPTEDDSTFLLSSVSPV-APDQQATENEAHNGIENRSYW 238

Query: 61  EELSCGIYSLSMAASKLHGCTFGEVKRHEWANTALINLIKWERVSVEPKPEELSFSC--- 117
           EEL CG+YS+ + AS  +G   GEV+ HE+ N+ L  LIKWER+SV P  E L   C   
Sbjct: 239 EELPCGVYSMHVDASNSNGFLVGEVQIHEYTNSTLKELIKWERISVVPSSENLQTFCPKF 298

Query: 118 -------------------GLDQTSFSLPARNVLSALKKSVMLRTSLHTIFKAGTSDGGQ 158
                              G  Q S  + A  +L+ LK+SV+ RTSL+TI++A  S   Q
Sbjct: 299 SRGQQDVHSASLETVPCEAGSTQNSIPMRAHMLLNVLKESVIRRTSLYTIYQAVISGIKQ 358

Query: 159 EELVPVAVLFSGGLDSMILAALLDQCLDPSYGIDLLNVSFDGQFAPDRISAKAGVEELSR 218
           E+ VPVA+LFSGGLDSMILAALLDQCLDP+Y IDLL VSFDG+ APDR SAK G++EL R
Sbjct: 359 EKFVPVAILFSGGLDSMILAALLDQCLDPTYEIDLLTVSFDGELAPDRKSAKTGLKELKR 418

Query: 219 IAPLRRWKLVEIDADLSKLKLEMKHVMALINPANTYM 255
           +AP RRW+LVEIDADLS L  E  HVM+LINPANTYM
Sbjct: 419 VAPSRRWRLVEIDADLSDLVSETSHVMSLINPANTYM 455