Jatropha Genome Database

JcCA0134821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0134821.10 - phase: 1 /partial
         (87 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g043760.1 Intron maturase, type II; Maturase-related,...    91   1e-19
IMGA|Medtr7g021720.1 Intron maturase, type II; Maturase-related,...    91   1e-19
IMGA|Medtr7g116530.1 Maturase-related, N-terminal chr07_pseudomo...    83   3e-17

>IMGA|Medtr3g043760.1 Intron maturase, type II; Maturase-related,
           N-terminal chr03_pseudomolecule_IMGAG_V3
           11997979-12000200 E EGN_Mt090430 20090702
          Length = 506

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 55/87 (63%)

Query: 1   SLIIQKGSISIFTKSNPRFFLFLYNSHVYEYESILFFLRNQSFHLRSTFSRVLLERIYFY 60
           S I  K SIS F+KSNPR FLFLYN +V EYESI  FLRN+S HLR     V  ERI+ Y
Sbjct: 189 SFITTKNSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSSHLRLKSFNVFFERIFCY 248

Query: 61  GKIEHFAEVFANDFQTILWLVKYPFMH 87
            K EH  EVFA DF   L   K P +H
Sbjct: 249 AKREHLVEVFAKDFSYTLTFFKDPLIH 275


>IMGA|Medtr7g021720.1 Intron maturase, type II; Maturase-related,
           N-terminal chr07_pseudomolecule_IMGAG_V3 5290432-5288465
           E EGN_Mt090430 20090702
          Length = 489

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 55/87 (63%)

Query: 1   SLIIQKGSISIFTKSNPRFFLFLYNSHVYEYESILFFLRNQSFHLRSTFSRVLLERIYFY 60
           S I  K SIS F+KSNPR FLFLYN +V EYESI  FLRN+S HLR     V  ERI+ Y
Sbjct: 189 SFITTKNSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSSHLRLKSFNVFFERIFCY 248

Query: 61  GKIEHFAEVFANDFQTILWLVKYPFMH 87
            K EH  EVFA DF   L   K P +H
Sbjct: 249 AKREHLVEVFAKDFSYTLTFFKDPLIH 275


>IMGA|Medtr7g116530.1 Maturase-related, N-terminal
           chr07_pseudomolecule_IMGAG_V3 26977606-26975885 H
           EGN_Mt090430 20090702
          Length = 120

 Score = 83.2 bits (204), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/87 (55%), Positives = 56/87 (64%)

Query: 1   SLIIQKGSISIFTKSNPRFFLFLYNSHVYEYESILFFLRNQSFHLRSTFSRVLLERIYFY 60
           ++I  K SIS F+KSNPR FLFLYN +V EYESI  FLRN+S HLR        ER +FY
Sbjct: 25  NVITTKNSISTFSKSNPRLFLFLYNFYVCEYESIFLFLRNKSSHLRLKSFSAFFERFFFY 84

Query: 61  GKIEHFAEVFANDFQTILWLVKYPFMH 87
            K EH  EVFA DF   L  +K P +H
Sbjct: 85  AKREHLVEVFAKDFSYTLTFLKDPLIH 111