Jatropha Genome Database

JcCA0132221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0132221.10 + phase: 0 /partial
         (420 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g110470.1 IspG protein; Dihydropteroate synthase-like...   758   0.0  
IMGA|Medtr2g110470.2 IspG protein; Dihydropteroate synthase-like...   708   0.0  

>IMGA|Medtr2g110470.1 IspG protein; Dihydropteroate synthase-like
           chr02_pseudomolecule_IMGAG_V3 25973011-25967013 E
           EGN_Mt090430 20090702
          Length = 740

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/444 (81%), Positives = 397/444 (89%), Gaps = 24/444 (5%)

Query: 1   MATGTVPASFTGLKARESSLGFGKSMDFVRVCDLKRIKSGRKKISMIRNSNPGPEMVELQ 60
           M  GTVPASF+ L+  +S LGFGKS+DFVRV DL+R+KS R+K+S+IRNSNP  ++ ELQ
Sbjct: 1   MVAGTVPASFSSLRTCDSGLGFGKSIDFVRVSDLQRMKSSRRKVSIIRNSNPSQDIAELQ 60

Query: 61  PASEGSPLLVPRQKYCESVHKTVRRKTRTVMVGNVALGSDHPIRVQTMTTSDTKDVAGTV 120
           PAS+GS LLVPRQKYCES+HKTVRRKTRTV VG+V +GSDHPIR+QTMTT+DTKDVAGTV
Sbjct: 61  PASKGSQLLVPRQKYCESLHKTVRRKTRTVNVGDVTIGSDHPIRIQTMTTTDTKDVAGTV 120

Query: 121 EQVMRIADQGANLVRITVQGKREADAAFEIKNTLVQKNYNIPLVADIHFAPTVALRVAEC 180
           EQVM+IAD+GA++VRITVQGK+EADA FEIKN+LVQKNYNIPLVADIHFAPTVALRVAEC
Sbjct: 121 EQVMKIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPTVALRVAEC 180

Query: 181 FDKIRVNPGNFADRRAQFEKLEYTDEDYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNHG 240
           FDKIRVNPGNFADRRAQFE LEYT++DYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 181 FDKIRVNPGNFADRRAQFEILEYTEDDYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNHG 240

Query: 241 SLSDRIMSYYGDSPRG------------------------NASNPVIMVQAYRLLVAEMY 276
           SLSDRIMSYYGDSPRG                         ASNPV+MVQAYRLLVAEMY
Sbjct: 241 SLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEMY 300

Query: 277 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 336
           VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPC RLA
Sbjct: 301 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCTRLA 360

Query: 337 NLGMRASAIQQGVAPFEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGVLHRDGSVLMSVSL 396
           NLG RA+ +Q+GVAPFEEKHRHYFDFQRRSGQLP+QKEGEEVDYRG LHRDGSVLMSVSL
Sbjct: 361 NLGTRAAELQKGVAPFEEKHRHYFDFQRRSGQLPLQKEGEEVDYRGTLHRDGSVLMSVSL 420

Query: 397 DQLKAPELLYKSLAAKLVVGMPLR 420
           +QLK PELLYKSL+AKL+VGMP +
Sbjct: 421 EQLKTPELLYKSLSAKLIVGMPFK 444


>IMGA|Medtr2g110470.2 IspG protein; Dihydropteroate synthase-like
           chr02_pseudomolecule_IMGAG_V3 25973011-25967013 E
           EGN_Mt090430 20090702
          Length = 704

 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/408 (82%), Positives = 368/408 (90%), Gaps = 24/408 (5%)

Query: 37  IKSGRKKISMIRNSNPGPEMVELQPASEGSPLLVPRQKYCESVHKTVRRKTRTVMVGNVA 96
           +KS R+K+S+IRNSNP  ++ ELQPAS+GS LLVPRQKYCES+HKTVRRKTRTV VG+V 
Sbjct: 1   MKSSRRKVSIIRNSNPSQDIAELQPASKGSQLLVPRQKYCESLHKTVRRKTRTVNVGDVT 60

Query: 97  LGSDHPIRVQTMTTSDTKDVAGTVEQVMRIADQGANLVRITVQGKREADAAFEIKNTLVQ 156
           +GSDHPIR+QTMTT+DTKDVAGTVEQVM+IAD+GA++VRITVQGK+EADA FEIKN+LVQ
Sbjct: 61  IGSDHPIRIQTMTTTDTKDVAGTVEQVMKIADKGADIVRITVQGKKEADACFEIKNSLVQ 120

Query: 157 KNYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFADRRAQFEKLEYTDEDYQKELEHIE 216
           KNYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFADRRAQFE LEYT++DYQKELEHIE
Sbjct: 121 KNYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFADRRAQFEILEYTEDDYQKELEHIE 180

Query: 217 QVFTPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDSPRG-------------------- 256
           QVFTPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDSPRG                    
Sbjct: 181 QVFTPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNF 240

Query: 257 ----NASNPVIMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 312
                ASNPV+MVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG
Sbjct: 241 VFSMKASNPVVMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 300

Query: 313 LGDTIRVSLTEPPEKEIDPCRRLANLGMRASAIQQGVAPFEEKHRHYFDFQRRSGQLPVQ 372
           LGDTIRVSLTEPPE+EIDPC RLANLG RA+ +Q+GVAPFEEKHRHYFDFQRRSGQLP+Q
Sbjct: 301 LGDTIRVSLTEPPEEEIDPCTRLANLGTRAAELQKGVAPFEEKHRHYFDFQRRSGQLPLQ 360

Query: 373 KEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPLR 420
           KEGEEVDYRG LHRDGSVLMSVSL+QLK PELLYKSL+AKL+VGMP +
Sbjct: 361 KEGEEVDYRGTLHRDGSVLMSVSLEQLKTPELLYKSLSAKLIVGMPFK 408