Jatropha Genome Database

JcCA0132071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0132071.10 + phase: 0 
         (379 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g012910.1 Glycosyl transferase, group 1 chr06_pseudom...   226   1e-59
IMGA|Medtr3g123800.1 Glycosyl transferase, group 1; N-6 Adenine-...   225   4e-59

>IMGA|Medtr6g012910.1 Glycosyl transferase, group 1
           chr06_pseudomolecule_IMGAG_V3 2547326-2554167 E
           EGN_Mt090430 20090702
          Length = 758

 Score =  226 bits (576), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/332 (40%), Positives = 189/332 (56%), Gaps = 36/332 (10%)

Query: 8   GHRVMTISPRYDQYKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDRVFVDHPMF--LEK 65
           GHRVM ++P Y  Y ++ D  V  + +V G+   V +F  Y  GVD VF+D P+F  LE 
Sbjct: 300 GHRVMVVAPHYGNYAEAQDIGVRKRYKVAGQDMEVTYFQTYIDGVDFVFIDSPIFQHLE- 358

Query: 66  VWGKTGSKLYGPQAGTDYENNQL----RFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVV 121
                 S +YG         N++    R +LFC+AA+E P  +      Y  G    ++V
Sbjct: 359 ------SNIYG--------GNRVDILRRMALFCKAAVEVPWHVPCGGVCYGDG----NLV 400

Query: 122 FIANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERFKNS 181
           FIANDWHTALLP YLKA+Y+  G+    + V  IHNIA+QGR    DF +++LP  + + 
Sbjct: 401 FIANDWHTALLPVYLKAYYRDHGLMNYTRSVLVIHNIAHQGRGPLDDFNIVDLPGNYIDL 460

Query: 182 FDFFDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVELDNILRMTG-- 239
           F  +D    PV G   N   AG+  +DRIVTVS  YA EL +  E G  L+ I+      
Sbjct: 461 FRMYD----PVGGEHFNIFAAGLKTADRIVTVSHGYAWELKTS-EGGWGLNGIINENDWK 515

Query: 240 ISGIVNGMDVQEWNPSTDKYIN----VKYDSATVMEAKPLLKEALQAEVGLPIDRNIPVI 295
             GIVNG+D ++WNP  D ++       Y   T+   K   K ALQ E+GLP+  ++P+I
Sbjct: 516 FRGIVNGVDTKDWNPQFDVHLKSEGYTNYTLETLQTGKRQCKAALQKELGLPVREDVPII 575

Query: 296 GFIGRLEEQKGSDILAAAIPFLIQENVQIIIL 327
            FIGRL++QKG D++  AIP+++  +VQ+I+L
Sbjct: 576 AFIGRLDQQKGVDLIGEAIPWMMSHDVQLIML 607


>IMGA|Medtr3g123800.1 Glycosyl transferase, group 1; N-6
           Adenine-specific DNA methylase
           chr03_pseudomolecule_IMGAG_V3 31238660-31231370 E
           EGN_Mt090430 20090702
          Length = 663

 Score =  225 bits (573), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/341 (39%), Positives = 198/341 (58%), Gaps = 27/341 (7%)

Query: 2   LLVQANGHRVMTISPRY-------DQYKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDR 54
           + +   GHRVM ISPRY        ++  + D    I +   G  + V FFH Y+ GVD 
Sbjct: 176 IALAGRGHRVMVISPRYIHGTAADSKFSGAVDLGSPINVFCFGGAQEVGFFHEYREGVDW 235

Query: 55  VFVDHPMFLEKVWGKTGSKLYGPQAGTDYENNQLRFSLFCQAAIEAPRLLSLNSGKYFSG 114
           VFVDHP F            YG + GT +++NQ RF+L   AA EAP +L L     F+ 
Sbjct: 236 VFVDHPSFHRP------GNPYGDKHGT-FKDNQFRFTLLSHAACEAPLVLPLGG---FT- 284

Query: 115 PYGEDVVFIANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNL 174
            YGE  +F+ NDWH +L+   L + Y+  G+Y++A+ +  IHNIA+QG      ++ L L
Sbjct: 285 -YGEKCLFLVNDWHASLVSVLLASKYRPYGVYKDARSILVIHNIAHQGVEPAITYSNLGL 343

Query: 175 PERFKNSFDF-FDGYEKPV---KGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVE 230
           P+ +  +  + F  + +      G  +N++K  I+ +DRIVTVS  Y+ E+ +  E G  
Sbjct: 344 PQEWYGALGWVFPTWARTHALDTGEAVNFLKGAIVTADRIVTVSKGYSWEITT-TEGGFG 402

Query: 231 LDNILR--MTGISGIVNGMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGLPI 288
           L  ILR   + +SGI NG+DV EW+PS+D++I   Y SA  +  K   K ALQ E+GLP+
Sbjct: 403 LQEILRDRKSILSGITNGIDVTEWDPSSDEHIASSY-SADDLSGKVKCKIALQKELGLPV 461

Query: 289 DRNIPVIGFIGRLEEQKGSDILAAAIPFLIQENVQIIILVS 329
             + PVIGF+GRL+ QKG D++  AIP L+Q++VQ ++L S
Sbjct: 462 RPDCPVIGFVGRLDYQKGIDLIRQAIPELMQDDVQFVMLGS 502