Jatropha Genome Database

JcCA0132021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0132021.10 + phase: 0 /partial
         (138 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcripti...   185   8e-48
IMGA|Medtr3g013050.1 Transcription factor, MADS-box; Transcripti...   111   1e-25
IMGA|Medtr5g075960.1 Transcription factor, K-box chr05_pseudomol...    60   4e-10
IMGA|Medtr7g083430.1 Transcription factor, K-box chr07_pseudomol...    58   1e-09
IMGA|Medtr5g032500.2 Transcription factor, K-box chr05_pseudomol...    57   3e-09
IMGA|Medtr2g010020.1 Transcription factor, K-box chr02_pseudomol...    56   7e-09
IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcripti...    54   3e-08
IMGA|Medtr5g032500.1 Transcription factor, K-box chr05_pseudomol...    53   4e-08
IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcripti...    53   5e-08
IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcripti...    53   5e-08
IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcripti...    50   2e-07
IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcripti...    50   4e-07
IMGA|Medtr5g049080.1 Transcription factor, K-box chr05_pseudomol...    49   9e-07
IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcripti...    46   5e-06
IMGA|Medtr3g154110.1 Transcription factor, MADS-box; Transcripti...    46   7e-06

>IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr04_pseudomolecule_IMGAG_V3
           33294099-33299967 E EGN_Mt090430 20090702
          Length = 251

 Score =  185 bits (469), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 92/140 (65%), Positives = 115/140 (82%), Gaps = 2/140 (1%)

Query: 1   FYQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFA 60
           +YQQ+AAKLR QIS LQ   R M+GESL  +N KDLR LES+LEKGISRIRSKKNE+LFA
Sbjct: 112 YYQQEAAKLRVQISNLQNHNRQMMGESLSNMNGKDLRNLESKLEKGISRIRSKKNEMLFA 171

Query: 61  EIEYMQKREIDLHNNNQLLRAKIAENE-RKQQNMNLMPGGGNYEIIQ-SQPFDNRNYFQV 118
           E+EYMQKRE++LHN+NQ+LRAKI+E+E R   N+N++PGG ++E +Q  Q FD+R YFQV
Sbjct: 172 ELEYMQKREVELHNSNQVLRAKISESEQRSNHNVNVLPGGTSFECMQPQQQFDSRGYFQV 231

Query: 119 NALQPTNHYPQQDQMALQLV 138
           N LQP + Y +QDQM+LQ V
Sbjct: 232 NELQPNDQYARQDQMSLQFV 251


>IMGA|Medtr3g013050.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr03_pseudomolecule_IMGAG_V3
           2348300-2341992 E EGN_Mt090430 20090702
          Length = 223

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/138 (47%), Positives = 92/138 (66%), Gaps = 5/138 (3%)

Query: 1   FYQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFA 60
           +YQQ++AKLR QI  LQ S R+++G++L  +  K+L+ LE+RLE+GI+RIRSKK+E+L A
Sbjct: 89  YYQQESAKLRQQIQMLQNSNRHLMGDALSTLTVKELKQLENRLERGITRIRSKKHEMLLA 148

Query: 61  EIEYMQKREIDLHNNNQLLRAKIAENERKQQNMNLMPGGGNYEIIQSQPFDNRNYFQVNA 120
           EIEY QKREI+L N N  LR KI + ER  Q +N++ G    E+   Q   +RN+F  N 
Sbjct: 149 EIEYFQKREIELENENLCLRTKINDVERLPQ-VNMVSGQ---ELNAIQALASRNFFNPNM 204

Query: 121 LQP-TNHYPQQDQMALQL 137
           ++     Y Q D+  L L
Sbjct: 205 MEDGETSYHQSDKKILHL 222


>IMGA|Medtr5g075960.1 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 27711235-27721420 E
           EGN_Mt090430 20090702
          Length = 169

 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 53/83 (63%)

Query: 1   FYQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFA 60
           F+Q++AA LR Q+  LQ+S R ++GE L G+  K+L+GLE++LE  +  +R KK +L   
Sbjct: 32  FWQREAAMLRQQLHNLQESHRQIMGEELSGLTVKELQGLENQLEISLRGVRMKKEQLFMD 91

Query: 61  EIEYMQKREIDLHNNNQLLRAKI 83
           EI+ + ++   +H  N  L  K+
Sbjct: 92  EIQELNRKGDIIHQENVELYRKV 114


>IMGA|Medtr7g083430.1 Transcription factor, K-box
           chr07_pseudomolecule_IMGAG_V3 17802338-17805458 H
           EGN_Mt090430 20090702
          Length = 211

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 19/128 (14%)

Query: 2   YQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAE 61
           + Q+ +KL+ +   LQKS R +LGE LG +N K+L+ LE +LE  +++ R +K +++  +
Sbjct: 33  WYQEMSKLKAKYESLQKSQRQLLGEDLGPLNMKELQNLEKQLEGALAQARQRKTQIMVEQ 92

Query: 62  IEYMQKREIDLHNNNQLLRAKIAEN----------ERKQQNMNLMPGGGNYEI------- 104
           +E ++++E  L + N+ LR K+  +               +   + GGGN+         
Sbjct: 93  MEELKRKERHLGDINKQLRFKLESDGFNLKAIESLWSSTHSATAVAGGGNFPFQPSETNP 152

Query: 105 --IQSQPF 110
              Q++PF
Sbjct: 153 MDCQTEPF 160


>IMGA|Medtr5g032500.2 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 13163679-13160585 E
           EGN_Mt090430 20090702
          Length = 169

 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 19/139 (13%)

Query: 1   FYQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFA 60
           F+Q++A  LR Q+  LQ++ R ++GE L G++ ++L+ LES+LE  +  +R KK ++L  
Sbjct: 31  FWQREADILRQQLQSLQENHRQLMGEQLYGLSIRNLQDLESQLELSLQGVRMKKEKILTD 90

Query: 61  EIEYMQKREIDLHNNNQLLRAKI---AENERKQQNMNL-------MPGGGNYEIIQSQPF 110
           EI+ + ++   +H  N  L  K+    +NE    + N        + GGG Y        
Sbjct: 91  EIQELNRKGSIIHQENVELYKKVYGTTDNEATATSKNAFVQFPYSVRGGGEYP------- 143

Query: 111 DNRNYFQVNALQPTNHYPQ 129
             +  FQ+   QP   Y +
Sbjct: 144 --QTLFQLQLCQPEQEYCE 160


>IMGA|Medtr2g010020.1 Transcription factor, K-box
           chr02_pseudomolecule_IMGAG_V3 2311955-2312917 H
           EGN_Mt090430 20090702
          Length = 121

 Score = 55.8 bits (133), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 52/83 (62%)

Query: 1   FYQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFA 60
           F+Q +AA LR Q+  LQ+S R ++GE L G+  K+L+ LE++LE  +  +R KK+ +L  
Sbjct: 21  FWQTEAATLRQQLQYLQESHRQLMGEGLSGLGIKELQNLENQLEISLKGVRMKKDHILTN 80

Query: 61  EIEYMQKREIDLHNNNQLLRAKI 83
           EI+ + ++   +H  N  L  K+
Sbjct: 81  EIKELHQKGNLVHQENVELHKKM 103


>IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr04_pseudomolecule_IMGAG_V3
           36883844-36877638 E EGN_Mt090430 20090702
          Length = 241

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 55/92 (59%)

Query: 3   QQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEI 62
           QQ+  KL+ +   LQ+S RN++GE LG ++ K+L  LE +L+  + +IRS + + +  ++
Sbjct: 93  QQEYLKLKARYEALQRSQRNLMGEDLGPLSSKELESLERQLDSSLKQIRSTRTQFMLDQL 152

Query: 63  EYMQKREIDLHNNNQLLRAKIAENERKQQNMN 94
             +Q++E  L   N+ LR ++   +  Q  MN
Sbjct: 153 SDLQRKEHMLSEANRSLRQRLEGYQLNQLQMN 184


>IMGA|Medtr5g032500.1 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 13163679-13160585 E
           EGN_Mt090430 20090702
          Length = 183

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 53/83 (63%)

Query: 1   FYQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFA 60
           F+Q++A  LR Q+  LQ++ R ++GE L G++ ++L+ LES+LE  +  +R KK ++L  
Sbjct: 31  FWQREADILRQQLQSLQENHRQLMGEQLYGLSIRNLQDLESQLELSLQGVRMKKEKILTD 90

Query: 61  EIEYMQKREIDLHNNNQLLRAKI 83
           EI+ + ++   +H  N  L  K+
Sbjct: 91  EIQELNRKGSIIHQENVELYKKV 113


>IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr03_pseudomolecule_IMGAG_V3
           25812647-25808917 E EGN_Mt090430 20090702
          Length = 246

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 5/125 (4%)

Query: 3   QQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEI 62
           QQ+  KL+ +   LQ++ RN++GE LG ++ KDL  LE +L+  + +IRS + + +  ++
Sbjct: 95  QQEYLKLKARYESLQRTQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQL 154

Query: 63  EYMQKREIDLHNNNQLLRAKIAENERKQQNMNLMP---GGGNYEIIQSQPFDNRNYFQVN 119
             +Q++E  L   N+ LR ++   +     +NL     G G +   Q+Q   + + FQ  
Sbjct: 155 GDLQRKEHLLCEANRALRQRMEGYQINSLQLNLSAEDMGYGRHHPGQNQ--GDHDVFQPI 212

Query: 120 ALQPT 124
             +PT
Sbjct: 213 ECEPT 217


>IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr05_pseudomolecule_IMGAG_V3
           20888794-20881921 E EGN_Mt090430 20090702
          Length = 301

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 54/87 (62%)

Query: 2   YQQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAE 61
           +  +  +L+ ++  LQ++ R+ +GE L  ++ K+L+ LE +L+ G+  IR++K ++++  
Sbjct: 91  WTMEYTRLKAKVELLQRNHRHYMGEELDSMSLKELQCLEQQLDTGLKNIRTRKTQVMYEA 150

Query: 62  IEYMQKREIDLHNNNQLLRAKIAENER 88
           I  +QK+E  +   N +L  +I E E+
Sbjct: 151 ISELQKKEKGIQEQNNMLSKEIKEKEK 177


>IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3593718-3599199 E EGN_Mt090430 20090702
          Length = 245

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 1/118 (0%)

Query: 8   KLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIEYMQK 67
           KL+ +   LQ++ RN+LGE LG ++ KDL  LE +L+  + ++RS K + +  ++  +Q 
Sbjct: 96  KLKQRFENLQRAQRNLLGEDLGPLSSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQN 155

Query: 68  REIDLHNNNQLLRAKIAE-NERKQQNMNLMPGGGNYEIIQSQPFDNRNYFQVNALQPT 124
           +E  L   N+ L  K+ E N R     +      + +    Q   ++++FQ     PT
Sbjct: 156 KEHMLVEANRSLSIKLEEINSRNHYRQSWEASDQSMQYEAQQNAHSQSFFQQLECNPT 213


>IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr08_pseudomolecule_IMGAG_V3
           15487044-15481223 E EGN_Mt090430 20090702
          Length = 240

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 48/73 (65%)

Query: 7   AKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIEYMQ 66
            +L+ +I  LQ++ R+ +GE LG ++ K+L+ LE +L+  +  IR+++N++++  I  +Q
Sbjct: 96  TRLKAKIDLLQRNYRHYMGEDLGSMSLKELQSLEQQLDTALKLIRTRRNQVMYESISELQ 155

Query: 67  KREIDLHNNNQLL 79
           K+E  +   N +L
Sbjct: 156 KKEKVIQEQNNML 168


>IMGA|Medtr5g049080.1 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 20901480-20897129 H
           EGN_Mt090430 20090702
          Length = 128

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 4   QQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIE 63
           Q+  KL+ ++  LQ++ RN+LGE L  ++  +L  +E +++  +  IRS K + +  ++ 
Sbjct: 6   QEYIKLKSKVEALQQTQRNILGEELEQLDINELEQIERQVDSSLKTIRSNKTQHMLDQLT 65

Query: 64  YMQKREIDLHNNNQLLRAKIAENERKQQNMNLMPGGGNYE---IIQSQPFDNRNYFQ 117
            +QK+E  L   N +LR K+ E      N+ L P   + E        P  +  Y++
Sbjct: 66  DLQKKEEMLLETNNILRNKLEEI-----NVTLQPTWESREQNATYSDHPHQSEGYYE 117


>IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3615380-3622271 E EGN_Mt090430 20090702
          Length = 256

 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 8   KLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEIEYMQK 67
           KL  ++  L++++RN +G  L  ++ K+L+ LE +L+  + RIR++KN+++   I  + K
Sbjct: 95  KLTAKVQVLERNLRNFVGNDLDPLSVKELQSLEQQLDTSLKRIRTRKNQVMNQSISELHK 154

Query: 68  REIDLHNNNQLLRAKIAENER 88
           R   L   N  L AK  E E+
Sbjct: 155 RARTLQEQNNKL-AKTKEKEK 174


>IMGA|Medtr3g154110.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr03_pseudomolecule_IMGAG_V3
           40697496-40693649 E EGN_Mt090430 20090702
          Length = 229

 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 8/130 (6%)

Query: 3   QQQAAKLRDQISGLQKSIRNMLGESLGGINPKDLRGLESRLEKGISRIRSKKNELLFAEI 62
           Q+   KL+D    L+K IR  +GE L  ++ ++LR LE  ++K    IR +K +++  +I
Sbjct: 88  QENLKKLKDVNRNLRKEIRQRMGECLNDLSMEELRLLEDEMDKAAKAIRERKYKVITNQI 147

Query: 63  EYMQKR---EIDLHNNNQLLRAKIAENERKQQNMNLMPGGGNYEIIQSQPFDNRNYFQVN 119
           +  +K+   E ++H  N+LLR   A  E  +  M  M  GG YE +          F + 
Sbjct: 148 DTQRKKFNNEREVH--NRLLRDLDARAEDPRFEM--MDNGGEYESVIGFSNLGPRMFAL- 202

Query: 120 ALQPTNHYPQ 129
           +LQPT+  P 
Sbjct: 203 SLQPTHPNPH 212