Jatropha Genome Database

JcCA0129501.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0129501.30 - phase: 1 /pseudo/partial
         (293 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g112430.1 Galactose mutarotase-like; chr08_pseudomole...   318   2e-87
IMGA|Medtr7g009340.1 Galactose mutarotase-like; chr07_pseudomole...   317   3e-87
IMGA|Medtr6g083370.1 Galactose mutarotase-like; chr06_pseudomole...   267   6e-72
IMGA|Medtr7g009340.2 Galactose mutarotase-like; chr07_pseudomole...    86   2e-17

>IMGA|Medtr8g112430.1 Galactose mutarotase-like;
           chr08_pseudomolecule_IMGAG_V3 25243528-25245705 E
           EGN_Mt090430 20090702
          Length = 340

 Score =  318 bits (816), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 150/263 (57%), Positives = 194/263 (73%), Gaps = 19/263 (7%)

Query: 3   ADIVLGFESIEEYKNDTTYFGSIVGRVANRIGKSQFTLNGTVYKLVPNNGKNSLHGGPKG 62
           AD+VLG++SIE+Y+ D  YFG ++GRVANRIG +QFTL+G  YKL  N+  N+LHGG KG
Sbjct: 65  ADVVLGYDSIEQYETDGVYFGGLIGRVANRIGGAQFTLDGKTYKLPANDHGNTLHGGQKG 124

Query: 63  FSEVLWKVYSYNKDSHITFTYDSFDGEEGYPGDLSVSVTYFVIGTNKIAVKMVAKPLNKA 122
           F + +WKV  +  DSH+TFTY+SFDGE+G+PG L VSVTY ++  N + VKM AKP+NK 
Sbjct: 125 FGDNVWKVKIHKDDSHVTFTYESFDGEQGFPGKLDVSVTYMLLEKNILGVKMTAKPVNKP 184

Query: 123 TPVNLALHTYFNLAGHNSGDILSHKIQLFAPEITPVDSELIPTGKITPVKGTPFDFLEPR 182
           TPVNLA H Y+NL GHNSGDIL+H +Q+F   ITPVD +LIPTGK+  VK TP+DFL+P+
Sbjct: 185 TPVNLAQHAYWNLGGHNSGDILNHSVQIFGSSITPVDDKLIPTGKLESVKNTPYDFLKPK 244

Query: 183 EIGSRIKEVPG-YDINYVLEDLKSGHLKRAAIVKEDVSGRKLELWTNQPGVQFYTSNMLH 241
           ++GS+I ++PG YDINY +++                  RK+ELW+NQ G+Q+YTS ML 
Sbjct: 245 QVGSQINDLPGLYDINYAIDE------------------RKMELWSNQVGLQYYTSGMLT 286

Query: 242 DVKGKDGFIYQKFAGFCLETQGF 264
           D KGKDG  Y K+ G  LETQGF
Sbjct: 287 DTKGKDGATYHKYGGIALETQGF 309


>IMGA|Medtr7g009340.1 Galactose mutarotase-like;
           chr07_pseudomolecule_IMGAG_V3 1623025-1627971 E
           EGN_Mt090430 20090702
          Length = 362

 Score =  317 bits (813), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 157/268 (58%), Positives = 198/268 (73%), Gaps = 6/268 (2%)

Query: 3   ADIVLGFESIEEYKNDTTYFGSIVGRVANRIGKSQFTLNGTVYKLVPNNGKNSLHGGPKG 62
           ADIVLG++SI+EY ND+TYFG+ VGRVANRIG +QF LNG  YKLV N G N+LHGG +G
Sbjct: 62  ADIVLGYDSIKEYTNDSTYFGATVGRVANRIGGAQFNLNGKHYKLVANEGNNTLHGGSRG 121

Query: 63  FSEVLWKVYSYNKDS---HITFTYDSFDGEEGYPGDLSVSVTYFVIGTNKIAVKMVAKPL 119
           FS+V+WKV  Y K+     +TFTY SFDGEEG+PGDL  +V+Y + G N++ + M AK L
Sbjct: 122 FSDVIWKVKRYQKEGPSPSVTFTYHSFDGEEGFPGDLLATVSYILTGKNQLVIIMKAKAL 181

Query: 120 NKATPVNLALHTYFNLAGHNSGDILSHKIQLFAPEITPVDSELIPTGKITPVKGTPFDFL 179
           NK TPVNLA H Y+N+ G NSG+IL+  IQ+F  + T VD +LIPTGK   VKGT +DFL
Sbjct: 182 NKPTPVNLANHAYWNIGGQNSGNILNEVIQIFGSKTTIVDDKLIPTGKFASVKGTAYDFL 241

Query: 180 EPREIGSRIKEVP---GYDINYVLEDLKSGHLKRAAIVKEDVSGRKLELWTNQPGVQFYT 236
           +P+ IGSRI ++    GYDINYVL+  K   +K AA V +  SGR LEL+TN PG+QFYT
Sbjct: 242 KPQIIGSRISQLAQHKGYDINYVLDGEKGKKIKLAAKVHDKKSGRILELYTNAPGLQFYT 301

Query: 237 SNMLHDVKGKDGFIYQKFAGFCLETQGF 264
            N + DVKGK G++Y+  AG CLE+Q F
Sbjct: 302 GNYIKDVKGKSGYVYKAHAGLCLESQAF 329


>IMGA|Medtr6g083370.1 Galactose mutarotase-like;
           chr06_pseudomolecule_IMGAG_V3 16926683-16929496 F
           EGN_Mt090430 20090702
          Length = 339

 Score =  267 bits (682), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 142/268 (52%), Positives = 178/268 (66%), Gaps = 7/268 (2%)

Query: 3   ADIVLGFESIEEY-KNDTTYFGSIVGRVANRIGKSQFTLNGTVYKLVPNNGKNSLHGGPK 61
           +D+VLG +S+E Y K    YFG IVGRVANRI   +FTL+G  Y L  N   N+LHGG  
Sbjct: 42  SDVVLGLDSVESYQKGLAPYFGCIVGRVANRIKNGKFTLDGVEYSLPLNKAPNTLHGGNV 101

Query: 62  GFSEVLWKVYSYNKDS--HITFTYDSFDGEEGYPGDLSVSVTYFVIGTNKIAVKMVAKPL 119
           GF + +W V  Y K     ITF YDS DGEEGYPGD++V+ TY +  +  + + M     
Sbjct: 102 GFDKKVWDVLEYKKGETPSITFKYDSHDGEEGYPGDITVTATYTLTSSTTMRLDMEGVAK 161

Query: 120 NKATPVNLALHTYFNLAGHNSGDILSHKIQLFAPEITPVDSELIPTGKITPVKGTPFDFL 179
           NK T +NLA HTY+NLAGH+SG+IL H I++ A  +TPVD   +PTG+I PVKGTPFDF 
Sbjct: 162 NKPTIINLAQHTYWNLAGHSSGNILDHSIKISANHVTPVDQNTVPTGEIVPVKGTPFDFT 221

Query: 180 EPREIGSRIKEVP-GYDINYVLE--DLKSGHLKRAAIVKEDVSGRKLELWTNQPGVQFYT 236
             + IG  I +V  GYD NYVL+  + K+G L+ AA V++  S R L LWTN PGVQFYT
Sbjct: 222 SEKRIGDTINQVGLGYDHNYVLDCGEEKAG-LRHAAKVRDPSSSRVLNLWTNAPGVQFYT 280

Query: 237 SNMLHDVKGKDGFIYQKFAGFCLETQGF 264
            N + +V GK G +Y K AG CLETQGF
Sbjct: 281 GNYVDNVTGKGGAVYGKHAGLCLETQGF 308


>IMGA|Medtr7g009340.2 Galactose mutarotase-like;
           chr07_pseudomolecule_IMGAG_V3 1623025-1627971 E
           EGN_Mt090430 20090702
          Length = 153

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/56 (71%), Positives = 47/56 (83%)

Query: 3   ADIVLGFESIEEYKNDTTYFGSIVGRVANRIGKSQFTLNGTVYKLVPNNGKNSLHG 58
           ADIVLG++SI+EY ND+TYFG+ VGRVANRIG +QF LNG  YKLV N G N+LHG
Sbjct: 62  ADIVLGYDSIKEYTNDSTYFGATVGRVANRIGGAQFNLNGKHYKLVANEGNNTLHG 117