Jatropha Genome Database

JcCA0128511.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0128511.20 - phase: 0 /partial
         (232 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g118600.1 Acyl-ACP thioesterase chr08_pseudomolecule_...   191   2e-49
IMGA|Medtr3g150820.1 Acyl-ACP thioesterase chr03_pseudomolecule_...   183   6e-47

>IMGA|Medtr8g118600.1 Acyl-ACP thioesterase
           chr08_pseudomolecule_IMGAG_V3 26670005-26666185 E
           EGN_Mt090430 20090702
          Length = 414

 Score =  191 bits (486), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 86/150 (57%), Positives = 113/150 (75%), Gaps = 1/150 (0%)

Query: 1   GEVVEIDTWVGASGKNGMRRDWLVRSQATGQVFARATSTWVMMNEKTRRLSKMPEEVRAE 60
           G+VV ++TWV ASGKNGMRRDWL+R   TG++  RA+S WVMMN+ TR+LSK+PEEVR E
Sbjct: 208 GDVVHVETWVSASGKNGMRRDWLLRDYNTGEILTRASSVWVMMNKHTRKLSKIPEEVRGE 267

Query: 61  IAPWFIEKQAIKEEVPEKIAKLDDK-ARYVVTNLKPKRSDLDMNQHVNNVKYVRWMLETL 119
           I  +F+E   I EE   K+AKLDD  A Y+ + L P+ SDLD+NQHVNNVKY+ W+LE+ 
Sbjct: 268 IGSYFVESAPILEEDDRKLAKLDDSTADYIRSGLSPRWSDLDVNQHVNNVKYIGWILESA 327

Query: 120 PDQFFENHQLSGITLEYKRECGSSDIVESL 149
           P    E+H+L  +TLEY+RECG   +++SL
Sbjct: 328 PQSILESHELCAMTLEYRRECGKDSVLQSL 357


>IMGA|Medtr3g150820.1 Acyl-ACP thioesterase
           chr03_pseudomolecule_IMGAG_V3 39804582-39801740 H
           EGN_Mt090430 20090702
          Length = 387

 Score =  183 bits (465), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 99/226 (43%), Positives = 144/226 (63%), Gaps = 30/226 (13%)

Query: 1   GEVVEIDTWVGASGKNGMRRDWLVRSQATGQVFARATSTWVMMNEKTRRLSKMPEEVRAE 60
           GE +EIDTWV A+GKNGMRRDW++R + T ++  +ATSTWV+MN +TRRLSK+PEEVR E
Sbjct: 185 GEEIEIDTWVDAAGKNGMRRDWIIRDRCTKEIITKATSTWVIMNRETRRLSKIPEEVRKE 244

Query: 61  IAPWFIEKQAI--KEEVPEKIAKL-DDKARYVVTNLKPKRSDLDMNQHVNNVKYVRWMLE 117
           + P+++ K A+  +E   EKI KL DD A  + + L P+ +D+D+NQHVNNVKY+ W+LE
Sbjct: 245 LTPFYLHKIAVASEERDCEKIDKLTDDTAERIQSGLAPRWNDMDVNQHVNNVKYIGWILE 304

Query: 118 TLPDQFFENHQLSGITLEYKRECGSSDIVESLCEPDEEEGIINTGLKQNNDKSLFNGFSL 177
           ++P +  E++ ++ +TLE++REC  SD +ESL  P E   +I  G   NN          
Sbjct: 305 SVPIKVLEDYNMTSLTLEFRRECTQSDTLESLTCPTER--VI--GESDNN---------- 350

Query: 178 PSEIMEGNGFLSSLEKTPLKYTHLLVAKGKTQSEEIVRGKTIWKKK 223
                      SS  K   +YTHLL  + +   +++VR ++ W  K
Sbjct: 351 -----------SSNRKPDQQYTHLL--RLQDDQKDVVRARSEWNLK 383