Jatropha Genome Database

JcCA0127891.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0127891.20 + phase: 0 
         (345 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g100600.1 Nicotianamine synthase chr01_pseudomolecule...   293   9e-80
IMGA|Medtr2g038330.1 Nicotianamine synthase chr02_pseudomolecule...   269   1e-72

>IMGA|Medtr1g100600.1 Nicotianamine synthase
           chr01_pseudomolecule_IMGAG_V3 20946388-20947585 E
           EGN_Mt090430 20090702
          Length = 341

 Score =  293 bits (750), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 140/264 (53%), Positives = 194/264 (73%)

Query: 79  LIARITEIHNSVSKLDSLRPSKQINALLTNLVKLCILPSSIEIETLSPQVQEMRNSLINL 138
           LI  + ++++ +S LD+L+P K +N L T LV  C+ PS I++  LS +VQE+R+ LI L
Sbjct: 41  LIEEVCKLYDQISSLDTLKPCKNVNTLFTKLVLTCMPPSPIDVTKLSTKVQEIRSKLIRL 100

Query: 139 CGQAEGLLELEFAMFLNKIPEPLNNLNLFPYYGNYVKLANMEVRILNENGIVQPKKVAFI 198
           CG+AEG LE  ++  +     PLN LN+FPYY NY+KL+ +E  IL ++    PKK+AFI
Sbjct: 101 CGEAEGHLESHYSTIIASYNNPLNQLNIFPYYSNYLKLSLLEFNILTKHSTNVPKKIAFI 160

Query: 199 GSGPMPLTSLVMATHHLKSTHFVNFDIDESANDVARQIVASDTDLEKRMKFHTCDVMEVK 258
           GSGP+PLTSLV+AT+HL++T F N+D D  AN  A  +V+SD +L KRM F+T D+++V 
Sbjct: 161 GSGPLPLTSLVLATNHLQNTIFHNYDFDPLANSKASCLVSSDPELSKRMFFYTNDILDVS 220

Query: 259 EKFAEYDCIFLAALVGMSKEEKVKILGHIRKYMKAGGNLLVRSANGARAFLYPVIDEDDL 318
               EY+ ++LAALVGMS EEK +I+ H+ KYM  G  L++RSA+GARAFLYPV+D +DL
Sbjct: 221 NALKEYEVVYLAALVGMSVEEKNRIIEHLAKYMAPGALLMLRSAHGARAFLYPVVDTNDL 280

Query: 319 IGFEVLSIFHPNNEVINSVVLVRK 342
            GFEVLS+FHP +EVINSVV+ R+
Sbjct: 281 RGFEVLSVFHPTDEVINSVVIARR 304


>IMGA|Medtr2g038330.1 Nicotianamine synthase
           chr02_pseudomolecule_IMGAG_V3 10711186-10710338 H
           EGN_Mt090430 20090702
          Length = 282

 Score =  269 bits (688), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 131/268 (48%), Positives = 186/268 (69%), Gaps = 2/268 (0%)

Query: 77  EHLIARITEIHNSVSKLDSLRPSKQINALLTNLVKLCILPS-SIEIETLSPQVQEMRNSL 135
           E +I ++ +I++ +S+L SL P  Q+N L T LV  C  P    +I  LS +++E    L
Sbjct: 6   EVIIEKVCKIYDKLSRLGSLNPPNQVNDLFTQLVTTCTTPCHEFDITQLSQEIKEKIAKL 65

Query: 136 INLCGQAEGLLELEFAMFLNKIPEPLNNLNLFPYYGNYVKLANMEVRILNENGIVQPKKV 195
           I LCG+AEGLLE  ++  +     PLN++ +FPYY NY+KL ++E  +  ++    P K+
Sbjct: 66  ITLCGKAEGLLESHYSTLIGSNENPLNHIKIFPYYKNYLKLTHLEFTMFTKHITQVPSKL 125

Query: 196 AFIGSGPMPLTSLVMATHHLKSTHFVNFDIDESANDVARQIVASDTDLEKRMKFHTCDVM 255
           AFIGSGP+PLTS+++AT++L  T F NFDID  AN  A  +++ D DL KRM FHT D++
Sbjct: 126 AFIGSGPLPLTSIILATYYLTKTCFHNFDIDSLANSKAYDLISKDNDLSKRMLFHTSDIV 185

Query: 256 EVKEKFAEYDCIFLAALVGMSKEEKVKILGHIRKYMKAGGNLLVRSANGARAFLYPVIDE 315
           +VK +  E++ +FLAALVGM K+EK K++ H+ KYM  G  L++RSA+GA+AFLY V+D 
Sbjct: 186 DVKNELKEFNVVFLAALVGMDKKEKAKVINHLAKYMAPGAILVLRSAHGAKAFLYHVVDP 245

Query: 316 D-DLIGFEVLSIFHPNNEVINSVVLVRK 342
             DL GFEVLSIFHP +EVINSV++ RK
Sbjct: 246 SCDLKGFEVLSIFHPTDEVINSVIVARK 273