Jatropha Genome Database
- JcCA0124671.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0124671.10 - phase: 0
(196 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32... 358 e-100
IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3 21... 343 5e-95
IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3 19... 338 8e-94
IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3 87... 335 1e-92
IMGA|Medtr6g099230.1 Ras small GTPase, Rab type chr06_pseudomole... 311 1e-85
IMGA|Medtr2g132410.2 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32... 132 1e-31
IMGA|Medtr1g081200.1 Sigma-54 factor, interaction region; Ras sm... 99 1e-21
IMGA|Medtr7g118430.1 Ras GTPase; Sigma-54 factor, interaction re... 99 2e-21
IMGA|Medtr4g078950.1 Sigma-54 factor, interaction region; Ras sm... 94 5e-20
IMGA|Medtr2g033230.1 Sigma-54 factor, interaction region; Ras sm... 93 8e-20
IMGA|Medtr3g143270.1 Ras GTPase; Sigma-54 factor, interaction re... 93 9e-20
IMGA|Medtr6g022720.1 Sigma-54 factor, interaction region; Ras sm... 92 2e-19
IMGA|Medtr5g014080.1 Ras small GTPase, Rab type; chr05_pseudomol... 89 2e-18
IMGA|Medtr8g034870.1 Sigma-54 factor, interaction region; Ras sm... 89 2e-18
IMGA|Medtr1g081200.3 Sigma-54 factor, interaction region; Ras sm... 88 2e-18
IMGA|Medtr2g097820.1 Sigma-54 factor, interaction region; Ras sm... 87 7e-18
IMGA|Medtr4g142850.1 Sigma-54 factor, interaction region; Ras sm... 86 9e-18
IMGA|Medtr2g114540.1 Sigma-54 factor, interaction region; Ras sm... 86 1e-17
IMGA|Medtr2g005330.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3 18... 86 2e-17
IMGA|Medtr3g092520.1 Sigma-54 factor, interaction region; Ras sm... 86 2e-17
IMGA|Medtr4g158780.1 Ras small GTPase, Rab type; chr04_pseudomol... 85 2e-17
IMGA|Medtr7g093170.1 Ras GTPase; Sigma-54 factor, interaction re... 85 2e-17
IMGA|Medtr2g123110.1 Ras small GTPase, Rab type; chr02_pseudomol... 84 5e-17
IMGA|Medtr2g091780.1 Sigma-54 factor, interaction region; Ras sm... 83 1e-16
IMGA|Medtr2g005340.1 Sigma-54 factor, interaction region; Ras sm... 82 1e-16
IMGA|Medtr2g018470.1 Sigma-54 factor, interaction region; Ras sm... 82 2e-16
IMGA|Medtr7g046180.1 Ras-related protein ARA-1, putative chr07_p... 81 3e-16
IMGA|Medtr4g109180.1 Sigma-54 factor, interaction region; Ras sm... 81 3e-16
IMGA|Medtr3g073500.1 Sigma-54 factor, interaction region; Ras sm... 81 4e-16
IMGA|Medtr3g101960.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3 2... 80 5e-16
IMGA|Medtr5g084520.1 Ras small GTPase, Rab type; chr05_pseudomol... 79 1e-15
IMGA|Medtr3g086620.1 Ras small GTPase, Rab type; chr03_pseudomol... 79 1e-15
IMGA|Medtr2g122890.1 Sigma-54 factor, interaction region; Ras sm... 78 3e-15
IMGA|Medtr4g141030.1 Sigma-54 factor, interaction region; Ras sm... 77 5e-15
IMGA|Medtr4g009230.1 Sigma-54 factor, interaction region; Ras sm... 76 1e-14
IMGA|Medtr2g132390.1 Sigma-54 factor, interaction region; Ras sm... 74 6e-14
IMGA|Medtr4g095400.1 Sigma-54 factor, interaction region; Ras sm... 73 7e-14
IMGA|Medtr8g029570.1 Ras small GTPase, Rab type; chr08_pseudomol... 73 1e-13
IMGA|Medtr8g034810.1 Ras small GTPase, Rab type chr08_pseudomole... 72 2e-13
IMGA|Medtr1g081210.1 Ras small GTPase, Rab type chr01_pseudomole... 71 3e-13
IMGA|Medtr1g081200.2 Ras small GTPase, Rab type chr01_pseudomole... 71 3e-13
IMGA|Medtr1g099480.1 Calcium-binding EF-hand; chr01_pseudomolecu... 67 4e-12
IMGA|Medtr1g086440.1 Calcium-binding EF-hand; Ras small GTPase, ... 66 1e-11
IMGA|Medtr3g136520.2 Ras small GTPase, Rab type chr03_pseudomole... 65 2e-11
IMGA|Medtr3g136520.1 Ras small GTPase, Rab type chr03_pseudomole... 64 3e-11
IMGA|Medtr3g136500.1 Ras small GTPase, Rab type chr03_pseudomole... 64 3e-11
IMGA|Medtr3g136510.1 Ras small GTPase, Rab type chr03_pseudomole... 64 4e-11
IMGA|Medtr3g136510.2 Ras small GTPase, Rab type chr03_pseudomole... 64 4e-11
IMGA|Medtr4g142850.2 Sigma-54 factor, interaction region; Ras sm... 59 2e-09
IMGA|Medtr3g101760.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3 2... 54 4e-08
IMGA|Medtr5g099390.1 Ras small GTPase, Rab type chr05_pseudomole... 54 5e-08
IMGA|Medtr3g136500.2 Ras small GTPase, Rab type chr03_pseudomole... 51 4e-07
IMGA|Medtr7g145740.1 Ras small GTPase, Rab type; chr07_pseudomol... 49 1e-06
IMGA|Medtr5g035870.1 Calcium-binding EF-hand; Ras small GTPase, ... 49 2e-06
IMGA|Medtr4g062100.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3 11... 47 8e-06
>IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3
32003647-32002013 E EGN_Mt090430 20090702
Length = 196
Score = 358 bits (920), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/196 (87%), Positives = 181/196 (92%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKL 120
TAGQEDYNRLRPLSYRGADVFLLAFSL+S+ASYENISKKWIPELRHYAPTVP+VLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKL 120
Query: 121 DLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVLQX 180
DLR+D+QYLIDHPGAT ITT+QGEELK+ IGAAVY+ECSSKTQQNVKAVFDAAIKVVLQ
Sbjct: 121 DLREDRQYLIDHPGATAITTAQGEELKRAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQP 180
Query: 181 XXXXXXXXXXXXCLFL 196
C+FL
Sbjct: 181 PKQKKKRKKNRSCIFL 196
>IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3
21246015-21242846 F EGN_Mt090430 20090702
Length = 197
Score = 343 bits (879), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 160/179 (89%), Positives = 172/179 (96%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDGST+NLGLWD
Sbjct: 1 MSGSRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKL 120
TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENI+KKWIPELRHYAP VP++LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVLQ 179
DLRDD Q+ DHPGA PITT+QGEEL+K+IGA VYIECSSKTQ+NVKAVFD+AIKVVLQ
Sbjct: 121 DLRDDSQFFQDHPGAAPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDSAIKVVLQ 179
>IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3
19209541-19213679 F EGN_Mt090430 20090702
Length = 197
Score = 338 bits (868), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 156/178 (87%), Positives = 171/178 (96%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+SKKWIPEL+HYAP VP++LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVL 178
DLRDDKQ+ +DHPGA PITT+QGEEL+K+I A YIECSSK+QQNVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVL 178
>IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3
8775550-8778414 E EGN_Mt090430 20090702
Length = 197
Score = 335 bits (858), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 155/178 (87%), Positives = 170/178 (95%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GS VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+SKKWIPEL+HYAP VP++LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVL 178
DLRDDKQ+ IDHPGA PITT+QGEEL+K+I A YIECSSK+Q+NVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKSQENVKAVFDAAIRVVL 178
>IMGA|Medtr6g099230.1 Ras small GTPase, Rab type
chr06_pseudomolecule_IMGAG_V3 21851607-21855202 F
EGN_Mt090430 20090702
Length = 209
Score = 311 bits (797), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 161/179 (89%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS ++FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANV VDGS VNLGLWD
Sbjct: 1 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKL 120
TAGQEDY+RLRPLSYRGAD+F+LAFSLIS+ASYEN+ KKW+PELR +AP VP+VLVGTKL
Sbjct: 61 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 120
Query: 121 DLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVLQ 179
DLR+D+ Y DH G IT+++GEEL+K IGAA YIECSSKTQQNVKAVFD AIKVVLQ
Sbjct: 121 DLREDRGYFADHTGYNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 179
>IMGA|Medtr2g132410.2 Ras GTPase chr02_pseudomolecule_IMGAG_V3
32003647-32002723 E EGN_Mt090430 20090702
Length = 67
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/65 (96%), Positives = 63/65 (96%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQE 65
TAG
Sbjct: 61 TAGNH 65
>IMGA|Medtr1g081200.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr01_pseudomolecule_IMGAG_V3
16060257-16053471 E EGN_Mt090430 20090702
Length = 216
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPEL-RHYAPTVPVVLVGTKLDLR 123
E + + YRGA LL + + ++S+ NI K WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ K+ A P TS+G+ L G + E S+KT NV VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNMNVDEVF 170
>IMGA|Medtr7g118430.1 Ras GTPase; Sigma-54 factor, interaction
region chr07_pseudomolecule_IMGAG_V3 27950642-27953739 F
EGN_Mt090430 20090702
Length = 216
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPEL-RHYAPTVPVVLVGTKLDLR 123
E + + YRGA LL + + ++S+ NI + WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ K+ A P TS+G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>IMGA|Medtr4g078950.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
15573426-15577863 E EGN_Mt090430 20090702
Length = 216
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 15/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRL--RPLSYRGADVFLLAFSLISKASYENISKKWIPEL-RHYAPTVPVVLVGTKLD 121
E ++ + YRGA LL + + +AS+ NI + WI + +H + V +LVG K D
Sbjct: 75 ERFSFVINNFTYYRGAMGILLVYDVTDEASFNNI-RNWIRNIEQHASDNVNKILVGNKAD 133
Query: 122 LRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ + K+ A P TS+G+ L G + E S+KT NV+ VF
Sbjct: 134 MDESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNLNVEEVF 172
>IMGA|Medtr2g033230.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr02_pseudomolecule_IMGAG_V3
9016235-9019888 F EGN_Mt090430 20090702
Length = 211
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS A K + +GD VGK+C+L+ +T F + T+ F A ++ +D + L +W
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYA-PTVPVVLVGT 118
DTAGQE + + YRGA LL + + + ++ +++ W+ + R +A + ++L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANANMTIMLIGN 119
Query: 119 KLDLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
K DL + ++T +GE+ K G +++E S+KT QNV+ F
Sbjct: 120 KCDLAHRR----------AVSTEEGEQFAKENG-LIFMEASAKTAQNVEEAF 160
>IMGA|Medtr3g143270.1 Ras GTPase; Sigma-54 factor, interaction
region; chr03_pseudomolecule_IMGAG_V3 36921743-36915347
E EGN_Mt090430 20090702
Length = 207
Score = 92.8 bits (229), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 15/175 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+ +TS++F + PT+ +F +DG + L +WDTAGQE
Sbjct: 13 FKLLMIGDSGVGKSSLLLCFTSDSFE-NLSPTIGVDFKVKYFTIDGKKLKLAIWDTAGQE 71
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVV--LVGTKLDLR 123
+ L YRGA ++A+ + + ++ N+S+ W E+ Y+ + LVG K+D
Sbjct: 72 RFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKVDKE 131
Query: 124 DDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVL 178
D+ +T +G + + G ++IECS+KT+ NV+ F+ + +L
Sbjct: 132 SDR----------VVTKKEGIDFAREYG-CLFIECSAKTRVNVQHCFEELVLKIL 175
>IMGA|Medtr6g022720.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr06_pseudomolecule_IMGAG_V3
5114319-5120121 E EGN_Mt090430 20090702
Length = 211
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 14/181 (7%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS K + +GD VGK+C+L+ +T F + T+ F A ++ +D + L +W
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYA-PTVPVVLVGT 118
DTAGQE + + YRGA LL + + + ++ +++ W+ + R +A P + + L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANPNMTITLIGN 119
Query: 119 KLDLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVL 178
K DL + ++ +GE+ K G +++E S+KT QNV+ F +L
Sbjct: 120 KCDLSHRR----------AVSKEEGEQFAKENG-LLFMEASAKTAQNVEEAFIKTAAKIL 168
Query: 179 Q 179
Q
Sbjct: 169 Q 169
>IMGA|Medtr5g014080.1 Ras small GTPase, Rab type;
chr05_pseudomolecule_IMGAG_V3 4443349-4447486 E
EGN_Mt090430 20090702
Length = 223
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELR-HYAPTVPVVLVGTKLDLRDD 125
+ L P R + V ++ + + S+ ++ N + KWI E+R V +VLVG K DL +
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQTFLNTT-KWIEEVRTERGSDVIIVLVGNKTDLVEK 129
Query: 126 KQYLIDHP------GATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ LI +P G ++ GE + + ++IE S+K N+KA+F
Sbjct: 130 RLILILNPVIEDSLGHRQVSIEDGEAKARELN-VMFIETSAKAGFNIKALF 179
>IMGA|Medtr8g034870.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr08_pseudomolecule_IMGAG_V3
7638438-7637794 E EGN_Mt090430 20090702
Length = 215
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 95/172 (55%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+L+ +T N F + T+ F + ++ ++V L +W
Sbjct: 1 MSRSYAFKYIIIGDTGVGKSCLLLQFTDNRFQRFHDVTIGVEFGIRTININNNSVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPT-VPVVLVGT 118
DTAGQE + + YR A LL + + + ++++++ W+ + R +A + + ++LVG
Sbjct: 61 DTAGQERFRSITRSYYRKAAGALLVYDITRRETFDHMA-TWLEDARQHASSDMIIMLVGN 119
Query: 119 KLDLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
K DL G ++T +GE+ K G +++E S+K+++N++ F
Sbjct: 120 KSDL----------AGNRLVSTEEGEKFAKENG-LMFMEVSAKSRENIEEAF 160
>IMGA|Medtr1g081200.3 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr01_pseudomolecule_IMGAG_V3
16060257-16054311 E EGN_Mt090430 20090702
Length = 171
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPEL-RHYAPTVPVVLVGTKLDLR 123
E + + YRGA LL + + ++S+ NI K WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQYLIDH 132
+ K+ + H
Sbjct: 134 ESKRVCLTH 142
>IMGA|Medtr2g097820.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
22987161-22993145 E EGN_Mt090430 20090702
Length = 218
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VD + +WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELR-HYAPTVPVVLVGTKLDLR 123
E Y + YRGA LL + + +A++EN + +W+ ELR H P + V+L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFEN-AARWLKELRDHTDPNIVVMLIGNKSDLR 131
Query: 124 DDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+L+ P + ++ E L ++E S+ NV+ F
Sbjct: 132 ----HLVAVPTEDGKSFAERESL-------YFMETSALEATNVENAF 167
>IMGA|Medtr4g142850.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr04_pseudomolecule_IMGAG_V3
35680571-35684293 E EGN_Mt090430 20090702
Length = 217
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 24/184 (13%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+ +TS+ F D PT+ +F V ++G + L +WDTAGQE
Sbjct: 14 FKLLMIGDSGVGKSSLLLRFTSDDFD-DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQE 72
Query: 66 DYNRLRPLSYRGADVFLLA---------FSLISKASYENISKKWIPELRHYAPTVPV--V 114
+ L YRGA ++ + + + ++ N+S+ W E+ Y+ +
Sbjct: 73 RFRTLTSSYYRGAQGIIMGNISWKQLVFYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKM 132
Query: 115 LVGTKLDLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAI 174
LVG K +D G +T +G + + G ++IECS+KT+ NV+ F+ +
Sbjct: 133 LVGNK----------VDKEGDRVVTKKEGIDFAREYG-CLFIECSAKTRVNVQQCFEELV 181
Query: 175 KVVL 178
VL
Sbjct: 182 LKVL 185
>IMGA|Medtr2g114540.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr02_pseudomolecule_IMGAG_V3
27107054-27104346 E EGN_Mt090430 20090702
Length = 213
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 14/168 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQ 64
IK + +GD VGK+ +L+ ++ + F T Y+ T+ D + + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAP--TVPVVLVGTKLDL 122
E + + YRGA LL + + ++S+ NI+ WI + ++ V +LVG K+D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIT-NWIRSIEQHSSDNIVNKILVGNKVDM 133
Query: 123 RDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ K+ A P S+G+ L G + E S+KT NV F
Sbjct: 134 DESKR-------AVPF--SKGQALANKYGIK-FFETSAKTNLNVDEAF 171
>IMGA|Medtr2g005330.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3
184635-185968 F EGN_Mt090430 20090702
Length = 203
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD +VGK+C+L+ + +++ Y+ T+ +F V ++G T L +WDTAGQ
Sbjct: 9 LFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQIWDTAGQ 68
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYA-PTVPVVLVGTKLDLR 123
E + + YRGA ++ + + S+ N+ K+W+ E+ YA +V +LVG K DL
Sbjct: 69 ERFRTITSSYYRGAHGIIIVYDVTDIESFNNV-KQWLHEIDRYANHSVSKLLVGNKCDLT 127
Query: 124 DDK 126
D+K
Sbjct: 128 DNK 130
>IMGA|Medtr3g092520.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr03_pseudomolecule_IMGAG_V3
21753746-21751718 E EGN_Mt090430 20090702
Length = 216
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPT-VPVVLVGTKLDLR 123
E Y + YRGA LL + + + ++EN+ ++W+ ELR +A + + ++L G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENV-QRWLRELRDHADSNIVIMLAGNKSDLN 130
Query: 124 -------DDKQYLIDHPGATPITTSQGEEL 146
DD Q L + + + TS E L
Sbjct: 131 HLRAVSSDDAQNLAEKETLSFLETSALEAL 160
>IMGA|Medtr4g158780.1 Ras small GTPase, Rab type;
chr04_pseudomolecule_IMGAG_V3 39962115-39963689 E
EGN_Mt090430 20090702
Length = 190
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 10 VTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYN 68
V +GD GKT +++ + F T+ F V+ ++ +TV +WDTAGQE Y+
Sbjct: 5 VLLGDMGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYH 64
Query: 69 RLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYA-PTVPVVLVGTKLDLRDDKQ 127
L P+ YRG+ ++ + + S S+ +KKW+ E++ A P + ++LV K DL D ++
Sbjct: 65 SLAPMYYRGSAAAIVVYDITSMDSFVR-AKKWVREVQRQANPNLIMLLVANKADLEDQRK 123
Query: 128 YLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ +GEE K G + + E S+KT QNV +F
Sbjct: 124 ----------VGNEEGEEYAKENGMS-FFETSAKTAQNVNELF 155
>IMGA|Medtr7g093170.1 Ras GTPase; Sigma-54 factor, interaction
region chr07_pseudomolecule_IMGAG_V3 20752031-20755936 F
EGN_Mt090430 20090702
Length = 202
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAP-TVPVVLVGTKLDLR 123
E + + YRGA ++ + + + S+ N+ K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKCDLT 126
Query: 124 DDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDA 172
++ D A IG ++E S+K NV+ F A
Sbjct: 127 SERAVSYDTAKA----------FADEIGIP-FMETSAKDSTNVEQAFMA 164
>IMGA|Medtr2g123110.1 Ras small GTPase, Rab type;
chr02_pseudomolecule_IMGAG_V3 29724457-29722809 E
EGN_Mt090430 20090702
Length = 200
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD GKT + + + F + PT+ F ++ + +TV +WDTAGQE
Sbjct: 12 KLVLLGDMGTGKTSLALRFVKGQFFQNQEPTIGAAFFTQILSLSEATVKFDIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPEL-RHYAPTVPVVLVGTKLDLRDD 125
Y+ L P+ YRGA ++ + + S ++ +KKW+ EL RH + + + LV K DL
Sbjct: 72 YHSLAPMYYRGAAAAIVVYDISSIDTFVR-AKKWVQELQRHGSQKLVMALVANKCDLEPK 130
Query: 126 KQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
++ + T GE+ + G Y+E S+KT +N+ +F
Sbjct: 131 RE----------VETEDGEQFAQENG-MFYMETSAKTAENINELF 164
>IMGA|Medtr2g091780.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
20763526-20767375 E EGN_Mt090430 20090702
Length = 217
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELR-HYAPTVPVVLVGTKLDLR 123
E Y + YRGA LL + + A++EN+ +W+ ELR H + V+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHATFENVD-RWLKELRNHTDSNIVVMLVGNKADLR 131
>IMGA|Medtr2g005340.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
188745-187533 F EGN_Mt090430 20090702
Length = 220
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 15 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYA-PTVPVVLVGTKLDLR 123
E Y + YRGA LL + + +++N++ +W+ ELR +A + ++L+G K DL+
Sbjct: 75 ERYRAITSAYYRGALGALLVYDVTKPTTFDNVT-RWLKELRDHADANIVIMLIGNKTDLK 133
Query: 124 -------DDKQYLIDHPGATPITTS 141
+D Q + G + I TS
Sbjct: 134 HLRAVATEDAQSYAEKEGLSFIETS 158
>IMGA|Medtr2g018470.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
4871209-4868238 F EGN_Mt090430 20090702
Length = 217
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VD V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELR-HYAPTVPVVLVGTKLDLR 123
E Y + YRGA LL + + ++EN+ ++W+ ELR H + V+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVVMLVGNKADLR 131
>IMGA|Medtr7g046180.1 Ras-related protein ARA-1, putative
chr07_pseudomolecule_IMGAG_V3 11284278-11288236 F
EGN_Mt090430 20090702
Length = 215
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 14/174 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L + N F ++ T+ F +V +DG V +WDTAGQ
Sbjct: 13 LFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPEL-RHYAPTVPVVLVGTKLDLR 123
E + + YRGA L+ + + + ++E+I K+W+ EL TV +LVG K DL
Sbjct: 73 ERFRAVTSAYYRGAFGALVVYDISRRGTFESI-KRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 124 DDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVV 177
+ ++ ++ +G+ L + G ++E S+ NV+ F+ I+ +
Sbjct: 132 NIRE----------VSIEEGKALAEEEG-LFFMETSALDSTNVQTAFEIVIREI 174
>IMGA|Medtr4g109180.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr04_pseudomolecule_IMGAG_V3
24355316-24353037 E EGN_Mt090430 20090702
Length = 217
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELR-HYAPTVPVVLVGTKLDLR 123
E Y + YRGA LL + + ++EN+ ++W+ ELR H + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 131
Query: 124 -------DDKQYLIDHPGATPITTSQGEEL 146
DD + + + TS E L
Sbjct: 132 HLRAVSTDDAKAFAERENTFFMETSALESL 161
>IMGA|Medtr3g073500.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr03_pseudomolecule_IMGAG_V3
17019246-17019911 H EGN_Mt090430 20090702
Length = 221
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 93/172 (54%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+++ + N F + T+ F + ++ + V L +W
Sbjct: 1 MSHSYAFKYIIIGDTGVGKSCLVLQFMDNRFQRFHNATIGVGFGFKTININNNPVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPT-VPVVLVGT 118
DTAGQE + + YR A LL + + + ++ +++ W+ + R +A + + ++L+G
Sbjct: 61 DTAGQERFRSITKSYYRKAACALLVYDITRRETFNHLA-TWLEDARQHASSDMIIMLIGN 119
Query: 119 KLDLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
K DL ++ ++T +GE+ K G +++E S+K+++N++ F
Sbjct: 120 KSDLACNR----------VVSTEEGEKFTKENG-LMFMEVSAKSRENIEEAF 160
>IMGA|Medtr3g101960.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3
24774853-24778399 E EGN_Mt090430 20090702
Length = 222
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQED 66
K V +GD AVGK+ +L + N F D T+ F +V++ +V +WDTAGQE
Sbjct: 18 KVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQIWDTAGQER 77
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYA-PTVPVVLVGTKLDLRDD 125
Y + YRGA +L + + + S+++I +W+ ELR++A + ++L+G K DL +
Sbjct: 78 YRAVTSAYYRGAVGAMLVYDITKRPSFDHIP-RWLEELRNHADKNIVIILIGNKSDLEEQ 136
Query: 126 KQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ A P T +E + G ++E S+ NV+ F
Sbjct: 137 R--------AVP--TEDAKEFAEKEG-LFFLETSALQATNVETAF 170
>IMGA|Medtr5g084520.1 Ras small GTPase, Rab type;
chr05_pseudomolecule_IMGAG_V3 32172903-32178330 E
EGN_Mt090430 20090702
Length = 200
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYA-PTVPVVLVGTKLDLRDD 125
Y+ L P+ YRGA ++ + + + S+ +KKW+ EL+ P + V G K DL D
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLESFTR-AKKWVQELQKQGNPNMVVAFAGNKADLEDK 130
Query: 126 KQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
++ T++ + +IE S+KT NV +F
Sbjct: 131 RK-----------VTAEEARVYAEENGLFFIETSAKTAANVNDIF 164
>IMGA|Medtr3g086620.1 Ras small GTPase, Rab type;
chr03_pseudomolecule_IMGAG_V3 20313622-20319074 E
EGN_Mt090430 20090702
Length = 200
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYA-PTVPVVLVGTKLDLRDD 125
Y+ L P+ YRGA ++ + + S S+ +KKW+ EL+ P + + L G K DL D
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFSR-AKKWVQELQKQGNPNMVMALAGNKSDLEDK 130
Query: 126 KQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
++ T++ + ++E S+K+ NV VF
Sbjct: 131 RK-----------VTAEEARVYAEENGLFFMETSAKSAANVNDVF 164
>IMGA|Medtr2g122890.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr02_pseudomolecule_IMGAG_V3
29644699-29641448 E EGN_Mt090430 20090702
Length = 209
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V V+ L +WDTAGQ
Sbjct: 10 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQVEDRLFTLQIWDTAGQ 69
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPE-LRHYAPT----VPVVLVGTK 119
E + L YRGAD +L + + S+EN++ W E L +P+ P V++G K
Sbjct: 70 ERFQSLGVAFYRGADCCVLVYDVNVMKSFENLN-HWREEFLIQASPSDPENFPFVVLGNK 128
Query: 120 LDLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVLQ 179
+D+ ++ A S+G Y E S+K NV+A F+ K L+
Sbjct: 129 VDVDGGNSRVVSEKKAKAWCASKGN--------IPYFETSAKEGFNVEAAFECITKNALK 180
>IMGA|Medtr4g141030.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
34720246-34722755 E EGN_Mt090430 20090702
Length = 209
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 15/180 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + ++VD V L +WDTAGQ
Sbjct: 12 LLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKLVTLQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPT-----VPVVLVGTK 119
E ++ L YRGAD +L + + +++ ++ W + A T P VL+G K
Sbjct: 72 ERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLN-NWHDDFLKQADTGNPDAFPFVLLGNK 130
Query: 120 LDLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVLQ 179
+D +D + +T + E G+ Y E S+K NV F KV +
Sbjct: 131 VD--------VDGGNSRRVTEKKAREWCASRGSIPYFETSAKEGYNVDDAFLCVAKVASE 182
>IMGA|Medtr4g009230.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
1421872-1425592 F EGN_Mt090430 20090702
Length = 207
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 17/187 (9%)
Query: 1 MSTAR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
M++ R +K + +GD VGKT ++ Y + F Y T+ +F + V + L
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPE-LRHYAPT----VP 112
+WDTAGQE + L YRGAD +L + + S+EN++ W E L +P+ P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLN-HWREEFLIQASPSDPENFP 119
Query: 113 VVLVGTKLDLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDA 172
V++G K+D+ ++ A S+G Y E S+K NV+A F
Sbjct: 120 FVVLGNKIDVDGGNSRVVSEKKAKAWCASKGN--------IPYFETSAKEGFNVEAAFQC 171
Query: 173 AIKVVLQ 179
K L+
Sbjct: 172 IAKNALK 178
>IMGA|Medtr2g132390.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
31999589-31997335 F EGN_Mt090430 20090702
Length = 215
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ +V + V +WDTAGQ
Sbjct: 11 LFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIWDTAGQ 70
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELR-HYAPTVPVVLVGTKLDLR 123
E Y + YRGA LL + ++EN+ ++W+ ELR H V ++LVG K DL+
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDSTRHVTFENV-ERWLKELRDHTDAYVVIMLVGNKADLK 129
>IMGA|Medtr4g095400.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
19838057-19834450 F EGN_Mt090430 20090702
Length = 206
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYA-----PTVPVVLVGTK 119
E + L YRGAD +L + + S S++N++ W E A P V++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLN-NWREEFLIQANPSDPENFPFVVIGNK 126
Query: 120 LDLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVLQ 179
+D+ ++ A ++G Y E S+K NV+ F K L+
Sbjct: 127 IDIDGGNSRVVSEKKARAWCAAKGN--------IPYFETSAKEGINVEEAFQTIAKDALK 178
>IMGA|Medtr8g029570.1 Ras small GTPase, Rab type;
chr08_pseudomolecule_IMGAG_V3 6558177-6560109 E
EGN_Mt090430 20090702
Length = 216
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 17/118 (14%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDY 67
K V +GD AVGKT +L ++ N V ++G + +WDTAGQE Y
Sbjct: 28 KVVVIGDSAVGKTQILSRFSKNE---------------TVTINGKVIKAQIWDTAGQERY 72
Query: 68 NRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAP-TVPVVLVGTKLDLRD 124
+ YRGA +L + + + S+++++ KW+ ELR +A ++ ++LVG K DL D
Sbjct: 73 RAVTSAYYRGALGAMLVYDITKRQSFDHVA-KWVEELRAHADNSIVIMLVGNKGDLVD 129
>IMGA|Medtr8g034810.1 Ras small GTPase, Rab type
chr08_pseudomolecule_IMGAG_V3 7613157-7612519 E
EGN_Mt090430 20090702
Length = 187
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+L+ +T N F + T+ F + ++ + V L +W
Sbjct: 1 MSRSYAFKYIIIGDIGVGKSCLLLQFTDNRFQRFHDTTIGVEFGIRTININNNPVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVV-LVGT 118
DTAGQE ++ + YR A LL + + + ++++++ W+ + R +A + ++ L+G
Sbjct: 61 DTAGQERFSSITKSYYRKAADALLVYDITRRETFDHMA-TWLEDARQHASSDTIIMLIGN 119
Query: 119 KLDLRDDKQYLIDHPGATPITTSQGEELKKMIG 151
K DL ++ ++T +GE+ K G
Sbjct: 120 KSDLACNR----------VVSTEEGEKFTKENG 142
>IMGA|Medtr1g081210.1 Ras small GTPase, Rab type
chr01_pseudomolecule_IMGAG_V3 16067992-16061303 E
EGN_Mt090430 20090702
Length = 181
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPEL-R 105
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ NI K WI + +
Sbjct: 22 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQ 80
Query: 106 HYAPTVPVVLVGTKLDLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQN 165
H + V +LVG K D+ + K+ A P TS+G+ L G + E S+KT N
Sbjct: 81 HASDNVNKILVGNKADMDESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNMN 130
Query: 166 VKAVF 170
V+ VF
Sbjct: 131 VEEVF 135
>IMGA|Medtr1g081200.2 Ras small GTPase, Rab type
chr01_pseudomolecule_IMGAG_V3 16060257-16053471 E
EGN_Mt090430 20090702
Length = 181
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPEL-R 105
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ NI K WI + +
Sbjct: 22 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQ 80
Query: 106 HYAPTVPVVLVGTKLDLRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQN 165
H + V +LVG K D+ + K+ A P TS+G+ L G + E S+KT N
Sbjct: 81 HASDNVNKILVGNKADMDESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNMN 130
Query: 166 VKAVF 170
V VF
Sbjct: 131 VDEVF 135
>IMGA|Medtr1g099480.1 Calcium-binding EF-hand;
chr01_pseudomolecule_IMGAG_V3 20333411-20342012 E
EGN_Mt090430 20090702
Length = 230
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 10/174 (5%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQ-E 65
++ V GD GK+ ++ + ++ F + P V + V + V + + DT+ +
Sbjct: 17 VRIVVAGDQGTGKSSLISTASTENFRPNVAP-VLPPTTLAVDLYPDRVPITIIDTSSRVA 75
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKLDLRDD 125
D NR+ R AD +L ++ + EN+S W+P LR+ VPV++VG KLDLRD+
Sbjct: 76 DSNRVAEELQR-ADTVVLTYACDRPETLENLSTVWLPHLRNLEVNVPVIVVGCKLDLRDE 134
Query: 126 KQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVLQ 179
Q + +PI +++ IECS+ V VF A K VL
Sbjct: 135 NQQVSLEQVMSPI-------MQQFREIETCIECSASRLIQVPEVFYYAQKAVLH 181
>IMGA|Medtr1g086440.1 Calcium-binding EF-hand; Ras small GTPase, Rab
type; ; chr01_pseudomolecule_IMGAG_V3 17111254-17102829
E EGN_Mt090430 20090702
Length = 640
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVF-DNFSANVVVDGSTVNLGLWDTAGQE 65
++ V VGD + GKT ++ + S++FP P + + +N D +V L L DT
Sbjct: 13 VRIVIVGDKSAGKTTLISAMASDSFPATVPPLLRPTHLPSNSFTD--SVPLILIDTPSSV 70
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKLDLRDD 125
+ AD ++ ++ + S+E +S W+P+L+ PV++VG KLDLRD+
Sbjct: 71 GEQGKVVEELKRADSVIVTYACDNTMSFERVSTHWLPQLQKLEVKAPVLVVGCKLDLRDE 130
Query: 126 KQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVLQ 179
+ + +TT + ++++ IECS+ T V VF A K L
Sbjct: 131 SRQV----SLESLTTGIMNQFREVVTC---IECSAATLYQVPEVFYFAQKAALH 177
>IMGA|Medtr3g136520.2 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34476760-34478596 E
EGN_Mt090430 20090702
Length = 199
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKLDLRDD 125
+ LR Y ++ F + ++ +Y+N+ W +L +P+VL G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>IMGA|Medtr3g136520.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34476760-34479459 E
EGN_Mt090430 20090702
Length = 221
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKLDLRDD 125
+ LR Y ++ F + ++ +Y+N+ W +L +P+VL G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>IMGA|Medtr3g136500.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34466034-34470742 E
EGN_Mt090430 20090702
Length = 221
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKLDLRDD 125
+ LR Y ++ F + ++ +Y+N+ W +L +P+VL G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>IMGA|Medtr3g136510.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34466034-34474773 E
EGN_Mt090430 20090702
Length = 221
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKLDLRDD 125
+ LR Y ++ F + ++ +Y+N+ W +L +P+VL G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>IMGA|Medtr3g136510.2 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34471191-34474773 E
EGN_Mt090430 20090702
Length = 221
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKLDLRDD 125
+ LR Y ++ F + ++ +Y+N+ W +L +P+VL G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>IMGA|Medtr4g142850.2 Sigma-54 factor, interaction region; Ras
small GTPase, Rab type; chr04_pseudomolecule_IMGAG_V3
35680571-35684293 E EGN_Mt090430 20090702
Length = 93
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+ +TS+ F D PT+ +F V ++G + L +WDTAGQE
Sbjct: 14 FKLLMIGDSGVGKSSLLLRFTSDDFD-DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQE 72
Query: 66 DYNRLRPLSYRGADVFLLA 84
+ L YRGA ++
Sbjct: 73 RFRTLTSSYYRGAQGIIMG 91
>IMGA|Medtr3g101760.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3
24679515-24681411 E EGN_Mt090430 20090702
Length = 101
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLAFSL 87
+ L P R + V ++ + +
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDV 91
>IMGA|Medtr5g099390.1 Ras small GTPase, Rab type
chr05_pseudomolecule_IMGAG_V3 39733208-39730184 E
EGN_Mt090430 20090702
Length = 289
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQE 65
+K +GD +GKT LI Y N + N + V G+ ++ +WD AG +
Sbjct: 105 LKISLLGDCHIGKTTFLIKYVGNEVEKRSLQMEGLNLMDKTLYVQGARISFCIWDVAGDK 164
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKLD 121
P++ + A L+ F L S+++ N+ W E R + T +L+GTK D
Sbjct: 165 KSLDQIPMACKDAVALLIMFDLTSRSTLNNVV-GWYSEARKWNQTAIPILIGTKFD 219
>IMGA|Medtr3g136500.2 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34466034-34470742 E
EGN_Mt090430 20090702
Length = 116
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHY 107
+ LR Y ++ F + ++ +Y+N+ W +L Y
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRY 114
>IMGA|Medtr7g145740.1 Ras small GTPase, Rab type;
chr07_pseudomolecule_IMGAG_V3 34737364-34737979 F
EGN_Mt090430 20090702
Length = 98
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD AVGKT ML + N F D T+ F + V ++G + +WDTAGQE
Sbjct: 22 KVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKAQIWDTAGQER 81
Query: 67 Y 67
+
Sbjct: 82 F 82
>IMGA|Medtr5g035870.1 Calcium-binding EF-hand; Ras small GTPase, Rho
type chr05_pseudomolecule_IMGAG_V3 14899140-14894818 E
EGN_Mt090430 20090702
Length = 214
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 76 RGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKLDLRDDKQYLIDHPGA 135
+ AD +L ++ + EN++ W+P LR PV++ G KLDL D+ Q +
Sbjct: 30 QRADSVVLTYACDRSETLENLTTFWLPRLRKLEVKAPVIVAGCKLDLLDENQQVSLEQVM 89
Query: 136 TPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVFDAAIKVVL 178
+P+ +++ +ECSS V+ VF A K L
Sbjct: 90 SPL-------MQQFCEIQACVECSSYKTFEVREVFFFAQKAAL 125
>IMGA|Medtr4g062100.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3
11941560-11937852 F EGN_Mt090430 20090702
Length = 276
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 16/169 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDN-FSANVVVDGSTVNLGLWDTAGQE 65
+K +GD +GKT L+ Y N N +VV G+ ++ +W+ G
Sbjct: 92 LKISLLGDCQIGKTSFLVKYVGNEKEQGVEQRKGPNQMDKTLVVSGARISYCIWEVQGDG 151
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPTVPVVLVGTKLD---- 121
P++ + + L+ F L S+ + ++ W E R + T VL+GTK D
Sbjct: 152 KSEDQLPMACKDSVAILIMFDLTSRCTLNSV-LGWYKEARKWNQTAIPVLIGTKFDDFIQ 210
Query: 122 LRDDKQYLIDHPGATPITTSQGEELKKMIGAAVYIECSSKTQQNVKAVF 170
L D Q+ I S+ K + A ++ S+ NV +F
Sbjct: 211 LPIDMQWTI---------ASEARTYAKALNATLFFS-SATYNINVNKIF 249