Jatropha Genome Database

JcCA0122211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0122211.10 - phase: 0 
         (318 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g108180.1 NAD-dependent glycerol-3-phosphate dehydrog...   531   e-151
IMGA|Medtr4g118340.1 NAD-dependent glycerol-3-phosphate dehydrog...   492   e-140
IMGA|Medtr5g076490.1 NAD-dependent glycerol-3-phosphate dehydrog...    52   3e-07
IMGA|Medtr7g032290.1 Peptidase S26A, signal peptidase I; NAD-dep...    51   9e-07

>IMGA|Medtr7g108180.1 NAD-dependent glycerol-3-phosphate
           dehydrogenase, C-terminal chr07_pseudomolecule_IMGAG_V3
           25430587-25433755 E EGN_Mt090430 20090702
          Length = 457

 Score =  531 bits (1367), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 252/304 (82%), Positives = 272/304 (89%)

Query: 9   NVHQNGWSIQHGNCLEEKLDEFRCLLGKADGDPLRIVGVGAGAWGSVFAALLQDSYGQFR 68
           N+  NG S  H N LEEKLDEFR L+ K +GDPLRIV +GAGAWGSVFAALLQDSYGQFR
Sbjct: 4   NILGNGSSQNHNNGLEEKLDEFRRLISKTNGDPLRIVCIGAGAWGSVFAALLQDSYGQFR 63

Query: 69  EKVQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADE 128
           +KVQIRIWRR GRA+DR+TAEHLF+VINSREDVLRRLIRRCAYLKYVEARLGDRTL+ADE
Sbjct: 64  DKVQIRIWRRAGRAIDRSTAEHLFDVINSREDVLRRLIRRCAYLKYVEARLGDRTLYADE 123

Query: 129 ILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEIGHYWKERITV 188
           ILKDGFCLNMIDTP+CPLKVVTNLQEAVWDADIVVNG+PSTET E+FEEI  YWKERI+V
Sbjct: 124 ILKDGFCLNMIDTPVCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERISV 183

Query: 189 PIIISLAKGIEAALEPVPHIITPTQMINRATGINMENILYLGGPNIASEIYNKEYANARI 248
           P+IISL+KGIEAALEPVPHI+TPT+MI++ATG+ MENILYLGGPNIASEIYNKEYANARI
Sbjct: 184 PVIISLSKGIEAALEPVPHIVTPTKMIHQATGVPMENILYLGGPNIASEIYNKEYANARI 243

Query: 249 CGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGKFFYFLAHIDYCSMA 308
           CGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAG               
Sbjct: 244 CGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVASLTNESATSKSV 303

Query: 309 YFQH 312
           YF H
Sbjct: 304 YFAH 307


>IMGA|Medtr4g118340.1 NAD-dependent glycerol-3-phosphate
           dehydrogenase chr04_pseudomolecule_IMGAG_V3
           27487037-27483447 E EGN_Mt090430 20090702
          Length = 458

 Score =  492 bits (1267), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 244/308 (79%), Positives = 258/308 (83%), Gaps = 4/308 (1%)

Query: 8   MNVH--QNGWSIQHGNC-LEEKLDEFRCLLGKADGDPLRIVGVGAGAWGSVFAALLQDSY 64
           MN H   NG S+Q  N   EEKLDE R L+GK D DPLRIV VG GAWGSVF A+LQD+Y
Sbjct: 1   MNHHGYSNG-SLQSVNGNFEEKLDELRNLMGKVDDDPLRIVCVGGGAWGSVFTAMLQDAY 59

Query: 65  GQFREKVQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTL 124
           G FR+KV IRIWRRPGRAVDRATA HLFEVINSREDVLRRLIRRCAYLKYVE RLGDR L
Sbjct: 60  GSFRDKVLIRIWRRPGRAVDRATATHLFEVINSREDVLRRLIRRCAYLKYVEGRLGDRVL 119

Query: 125 FADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEIGHYWKE 184
            ADEILKDGFCLNM+DTP+CPLKVVTNLQEAVWDADIV+NG+PSTET EVFEEI  YWKE
Sbjct: 120 HADEILKDGFCLNMVDTPVCPLKVVTNLQEAVWDADIVINGLPSTETREVFEEISKYWKE 179

Query: 185 RITVPIIISLAKGIEAALEPVPHIITPTQMINRATGINMENILYLGGPNIASEIYNKEYA 244
           RITVP+IISLAKG+EA L P P IITPT MI+RATG+ +ENILYLGGPNIASEIYNKEYA
Sbjct: 180 RITVPVIISLAKGVEAELVPEPRIITPTLMISRATGVPIENILYLGGPNIASEIYNKEYA 239

Query: 245 NARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGKFFYFLAHIDY 304
           NARICGAEKWRKPLAKFLRQ HFIVWDN DLVTHEVMGGLKNVYAIGAG           
Sbjct: 240 NARICGAEKWRKPLAKFLRQAHFIVWDNVDLVTHEVMGGLKNVYAIGAGMVAALTNESAT 299

Query: 305 CSMAYFQH 312
               YF H
Sbjct: 300 SKSVYFAH 307


>IMGA|Medtr5g076490.1 NAD-dependent glycerol-3-phosphate
           dehydrogenase, C-terminal chr05_pseudomolecule_IMGAG_V3
           28000397-28008960 E EGN_Mt090430 20090702
          Length = 453

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 32/237 (13%)

Query: 66  QFREKVQIRIWRRPGRAV-------DRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 118
            +R K    + +R  + V         A A H+    +  E V+  L+R       +   
Sbjct: 107 SWRSKSNTDVLQRTNKVVVLGGGSFGTAMAAHVAHRKDQLEVVM--LVRDPEVCSSINES 164

Query: 119 LGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEI 178
             +R  F D  L +    N++ T        T+ + A+ DAD  ++ VP   +    E +
Sbjct: 165 HCNRNYFPDHTLPE----NVVAT--------TDAKSALRDADYCLHAVPVQFSAAFLESV 212

Query: 179 GHYWKERITVPIIISLAKGIEAALEPVPHIITPTQMINRATGINMENILYLGGPNIASEI 238
             Y    +     ISL+KG+E     +  +    Q+I +A   + +  + L GP+ A E+
Sbjct: 213 ADYVDPGLP---FISLSKGLE-----LNTLRMMAQIIPQALRNSRQPFVALSGPSFALEL 264

Query: 239 YNKEYANARICGAE--KWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAG 293
            NK    A +  ++  K    + + L   H  +  +SD+   E+ G LKNV AI AG
Sbjct: 265 MNK-LPTAMVVASKDKKLANAVQQLLASNHLRISTSSDVTGVEIAGALKNVLAIAAG 320


>IMGA|Medtr7g032290.1 Peptidase S26A, signal peptidase I;
           NAD-dependent glycerol-3-phosphate dehydrogenase,
           C-terminal chr07_pseudomolecule_IMGAG_V3 7988957-7993641
           H EGN_Mt090430 20090702
          Length = 348

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 61/261 (23%)

Query: 43  RIVGVGAGAWGSVFAALLQDS---YGQFREKVQIRIWRRPGRAVDRATAEHLFEVINSRE 99
           ++  VG+G WGSV A L+  +      F ++V++ ++       D+ T            
Sbjct: 3   KVTIVGSGNWGSVAAKLIASNTIKLSNFHDEVRMWVFEETLPNGDKLT------------ 50

Query: 100 DVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDA 159
           DV+++      YL  V  +LG                N++  P        +L+ AV DA
Sbjct: 51  DVIKQTNENVKYLPGV--KLGQ---------------NVVADP--------DLENAVKDA 85

Query: 160 DIVVNGVPSTETCEVFEEIGHYWKERI-TVPIIISLAKGIEAALEPVPHIITPTQMINRA 218
           +++V   P     +  E I      +I T    ISL KG+E   E    I T   +I+  
Sbjct: 86  NMLVFVTPH----QFMEGICKRLDGKIRTDAEGISLVKGMEVKKEGASMIST---LISNQ 138

Query: 219 TGINMENILYLGGPNIASEIYNKEYANARIC------GAEKWRKPLAKFLRQPHFIVWDN 272
             IN      L G NIA+EI  ++++ A I        AE+W     +    P+F V   
Sbjct: 139 LKINCS---VLMGANIANEIAMQKFSEATIGYRENKEAAERW----VQLFNTPYFNVTSV 191

Query: 273 SDLVTHEVMGGLKNVYAIGAG 293
            D+   E+ G LKN+ AI AG
Sbjct: 192 QDVEGVEMCGTLKNIVAIAAG 212