Jatropha Genome Database
- JcCA0121401.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0121401.10 - phase: 0 /partial
(347 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC235671_17.1 Helix-loop-helix DNA-binding AC235671.2 74985... 339 1e-93
IMGA|AC235671_14.1 Helix-loop-helix DNA-binding AC235671.2 61393... 304 3e-83
IMGA|Medtr8g078570.1 Helix-loop-helix DNA-binding chr08_pseudomo... 66 3e-11
IMGA|Medtr7g096910.1 Helix-loop-helix DNA-binding chr07_pseudomo... 59 4e-09
IMGA|Medtr3g029710.1 Helix-loop-helix DNA-binding chr03_pseudomo... 58 8e-09
IMGA|Medtr4g076190.1 Helix-loop-helix DNA-binding chr04_pseudomo... 57 2e-08
IMGA|Medtr5g014800.1 Helix-loop-helix DNA-binding chr05_pseudomo... 56 3e-08
IMGA|Medtr1g086480.1 Helix-loop-helix DNA-binding chr01_pseudomo... 54 2e-07
IMGA|Medtr2g010480.1 Helix-loop-helix DNA-binding chr02_pseudomo... 53 2e-07
IMGA|Medtr2g127270.1 Helix-loop-helix DNA-binding chr02_pseudomo... 52 4e-07
IMGA|Medtr3g150170.1 Helix-loop-helix DNA-binding chr03_pseudomo... 52 5e-07
IMGA|Medtr4g006510.1 Helix-loop-helix DNA-binding chr04_pseudomo... 52 5e-07
IMGA|Medtr4g006370.1 Helix-loop-helix DNA-binding chr04_pseudomo... 52 5e-07
IMGA|Medtr5g032280.1 Helix-loop-helix DNA-binding chr05_pseudomo... 51 1e-06
IMGA|Medtr2g127330.1 Helix-loop-helix DNA-binding chr02_pseudomo... 50 1e-06
IMGA|Medtr8g102390.1 Helix-loop-helix DNA-binding chr08_pseudomo... 50 2e-06
IMGA|Medtr5g016950.1 Helix-loop-helix DNA-binding chr05_pseudomo... 50 2e-06
IMGA|Medtr2g127190.1 Helix-loop-helix DNA-binding chr02_pseudomo... 50 2e-06
IMGA|Medtr1g024210.1 Helix-loop-helix DNA-binding chr01_pseudomo... 49 4e-06
IMGA|Medtr2g127350.1 Helix-loop-helix DNA-binding chr02_pseudomo... 49 4e-06
IMGA|Medtr1g099080.1 Helix-loop-helix DNA-binding chr01_pseudomo... 49 5e-06
IMGA|Medtr5g014710.1 Helix-loop-helix DNA-binding chr05_pseudomo... 48 8e-06
>IMGA|AC235671_17.1 Helix-loop-helix DNA-binding AC235671.2
74985-73151 H EGN_Mt090430 20090702
Length = 486
Score = 339 bits (870), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/309 (60%), Positives = 226/309 (73%), Gaps = 26/309 (8%)
Query: 35 PNHTTPLSFVGDLPM--TDTASASSILYDPLFHLNLPPQPPLFRDLFQSLPPHGYSLP-G 91
PN ++F+GDLP+ +D S SS+LYDPL+ LNLPPQPP R+LFQSLP GYS+P
Sbjct: 193 PNFHNSMTFLGDLPIGSSDNTSGSSVLYDPLYPLNLPPQPPALRELFQSLP-RGYSMPTN 251
Query: 92 SRGSSLFGGVGDDHVEGSGGVNLYQEGDGEQQFDNGVLDFTWDMACMGNGRQGGNIKHFA 151
SR SLFG + E D GVL+F A +G GR G KHFA
Sbjct: 252 SRNGSLFG----------------GGDEMEGDGDMGVLEFNRVTASVGKGRGGKATKHFA 295
Query: 152 TERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKKRCAR 211
TE+QRR+ + KY LR+L+P+P+K DRASVVGDAI YI+EL+RTVNELK+LVEKKR R
Sbjct: 296 TEKQRREQLNGKYKILRDLIPSPTKTDRASVVGDAIEYIRELIRTVNELKLLVEKKRHGR 355
Query: 212 ERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDVRIIDDEVTIK 271
E KR K E+D+ + + K DPD GS+R+ WLQRKSKD+EVDVRIIDD+VTIK
Sbjct: 356 EMCKRLKTEDDAAESCN-IKPFGDPD-----GSIRTSWLQRKSKDSEVDVRIIDDDVTIK 409
Query: 272 LVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKIYEGSSVYASAIANKLI 331
L QRKK+NCLLFVSKVLDELQL+LHHVAGGHVG+Y SFLFNSK+ EGSSVYASAIAN++I
Sbjct: 410 LFQRKKVNCLLFVSKVLDELQLELHHVAGGHVGEYCSFLFNSKVNEGSSVYASAIANRVI 469
Query: 332 EVVDRQYAS 340
+V+D QYA+
Sbjct: 470 DVMDTQYAA 478
>IMGA|AC235671_14.1 Helix-loop-helix DNA-binding AC235671.2
61393-59528 H EGN_Mt090430 20090702
Length = 483
Score = 304 bits (779), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 178/315 (56%), Positives = 223/315 (70%), Gaps = 31/315 (9%)
Query: 33 TNPNHTTP-----LSFVGDLPM-TDTASASSILYDPLFHLNLPPQPPLFRDLFQSLPPHG 86
TNP P +SF+GDLP+ +D +S SS+LYDPLF LNLP Q P R+L QSLP
Sbjct: 186 TNPTQKPPNFHYSMSFLGDLPIGSDNSSGSSVLYDPLFPLNLPAQSPALRELPQSLP-RV 244
Query: 87 YSLP-GSRGSSLFGGVGDDHVEGSGGVNLYQEGDGEQQFDNGVLDFTWDMACMGNGRQGG 145
YS+P SR S FGG + +G GV+ + N V F +G G+ G
Sbjct: 245 YSMPTNSRNGSPFGGGDEMEGDGGMGVSQF----------NKVTAF------VGKGK-GK 287
Query: 146 NIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVE 205
+H TE+QRR+ +K +Y LR+L+PN +K+DRASVVGDAI Y++EL+RTVNELK+LVE
Sbjct: 288 ATEHLTTEKQRREQLKGRYKILRSLIPNSTKDDRASVVGDAIEYLRELIRTVNELKLLVE 347
Query: 206 KKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDVRIID 265
KKR E KR K E+ + + H K DPD GS+R+ WLQRKSKD+EVDVRIID
Sbjct: 348 KKRHEIEICKRHKTEDYAAESCH-MKPFGDPD-----GSIRTSWLQRKSKDSEVDVRIID 401
Query: 266 DEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKIYEGSSVYASA 325
D+VTIKL QRKK+NCLLFVSKVLDELQL+L+HVAGGHVG+Y SFLFNSK+ EGSSV+ASA
Sbjct: 402 DDVTIKLFQRKKVNCLLFVSKVLDELQLELNHVAGGHVGEYCSFLFNSKVIEGSSVHASA 461
Query: 326 IANKLIEVVDRQYAS 340
IAN++I+V+D QYA+
Sbjct: 462 IANRVIDVLDTQYAA 476
>IMGA|Medtr8g078570.1 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 16006546-16008939 E
EGN_Mt090430 20090702
Length = 648
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 22/191 (11%)
Query: 139 GNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVN 198
NGR+ + H ERQRR+ + K+ LR +VPN SK D+AS++GDAI+YI EL +
Sbjct: 454 ANGREEP-LNHVEAERQRREKLNQKFYALRAVVPNGSKMDKASLLGDAISYINELKSKLQ 512
Query: 199 ELKILVEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSK--- 255
L+ K ++ G +K E ++V +QS N L + S
Sbjct: 513 GLE--SSKGELEKQLGATKK----------ELELVASKNQSQNPIPLDKEKEKTTSSTSS 560
Query: 256 ----DTEVDVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLF 311
D ++DV+I+ + I++ KK + + L EL LD++H + V D +
Sbjct: 561 SKLIDLDIDVKIMGWDAMIRIQCSKKNHPAAKLMAALKELDLDVNHASVSVVNDL--MIQ 618
Query: 312 NSKIYEGSSVY 322
+ + GS Y
Sbjct: 619 QASVNMGSRFY 629
>IMGA|Medtr7g096910.1 Helix-loop-helix DNA-binding
chr07_pseudomolecule_IMGAG_V3 21802125-21805120 E
EGN_Mt090430 20090702
Length = 475
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 17/192 (8%)
Query: 148 KHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKK 207
K+ ER+RR+ + D+ LR++VP SK DRAS++GDA++Y+KELL+ +N L +E
Sbjct: 286 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAVDYLKELLQRINNLHNELEST 345
Query: 208 RCARERGKRQKIEEDSIGNVHESKIVDDP-----DQSFNNGSLRSFWLQRKSKDTEVDVR 262
++ + + H + G L L K++ +V+VR
Sbjct: 346 PPG------SLLQPSASASFHPLTPTPPTLPCRVKEDLYPGDL----LSPKNQSPKVEVR 395
Query: 263 IIDDE-VTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNS-KIYEGSS 320
+ + V I + ++ LL + LD L LD+ + +F + + EG
Sbjct: 396 VREGRAVNIHMFCTRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCREGQD 455
Query: 321 VYASAIANKLIE 332
V I L++
Sbjct: 456 VLPEQIKAVLLD 467
>IMGA|Medtr3g029710.1 Helix-loop-helix DNA-binding
chr03_pseudomolecule_IMGAG_V3 7859387-7862472 H
EGN_Mt090430 20090702
Length = 375
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 18/192 (9%)
Query: 126 NGVLDFTWDMACMGNGRQGGNIKH-----FATERQRRQHIKDKYDDLRNLVPNPSKNDRA 180
N ++D D C+ G + G K ER+RR+ +K+ LR++VP SK D+
Sbjct: 169 NTIIDNFDDENCVSEGDRKGKKKENPSKSLIAERKRRKKLKNNMHKLRSVVPKISKMDKV 228
Query: 181 SVVGDAINYIKELLRTVNELKILVEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSF 240
S++GDA++Y+KEL + +N+L+ + + + + + + V +Q F
Sbjct: 229 SILGDAVDYLKELKQQINDLQSEI-------KSSSHKSFMPLPMTSTMSTLPVQLKEQLF 281
Query: 241 NNGSLRSFWLQRKSKDTEVDVRIIDDE-VTIKLVQRKKINCLLFVSKVLDELQLDLHHVA 299
N ++ S K++ +V+VR+ + V I + K L+ LD L LD+H
Sbjct: 282 QN-NVSSL----KNQPAKVEVRVKEGGIVNIHITCASKPGVLVSTMMALDSLGLDVHQAN 336
Query: 300 GGHVGDYYSFLF 311
D+ +F
Sbjct: 337 ISCFNDFSLDVF 348
>IMGA|Medtr4g076190.1 Helix-loop-helix DNA-binding
chr04_pseudomolecule_IMGAG_V3 15076563-15074367 E
EGN_Mt090430 20090702
Length = 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 148 KHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKK 207
K +ER+RR +KDK LR+LVPN +K D+AS++GDA++Y+ EL +LK V
Sbjct: 139 KTLVSERRRRSRMKDKLYALRSLVPNITKMDKASIIGDAVSYMHELQSQAKKLKAEVAGL 198
Query: 208 RCARERGKRQ 217
+ K Q
Sbjct: 199 EASLAVSKTQ 208
>IMGA|Medtr5g014800.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 4794613-4796572 E
EGN_Mt090430 20090702
Length = 334
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 149 HFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKKR 208
H ER+RR+ I K+ L L+P+ K D+ASV+GDAIN++K+L EK +
Sbjct: 150 HIIAERKRREKISQKFIALSALLPDLKKMDKASVLGDAINHVKQLQ----------EKVK 199
Query: 209 CARERGKRQKIEEDSIGNVHESKIV---DDPDQSFNNGSLRSFWLQRKSKDT----EVDV 261
E+ ++ +E S+ V ++K +D ++ +N + SK + EV+
Sbjct: 200 LLEEKNQKNNVESVSMVYVEKTKSYSSDEDVSETSSNSGYGNCCHTHTSKPSRSLPEVEA 259
Query: 262 RIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDL 295
R+ + V I++ K L+ + + ++ L L +
Sbjct: 260 RVSEKNVLIRVHCEKHKGALMNIIQEIENLHLSV 293
>IMGA|Medtr1g086480.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 17130116-17122681 E
EGN_Mt090430 20090702
Length = 656
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 17/178 (9%)
Query: 122 QQFDNGVLDFTWDMACMGNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRAS 181
Q D GV D + + G + + H ER+RR+ + +++ LR+LVP +K D+AS
Sbjct: 445 QTHDAGV-DPSSKLRGKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKAS 503
Query: 182 VVGDAINYIKELLRTVNELKILVEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFN 241
++GD I Y+K+L R + +L+ R ++ + E+ S V + +V D+
Sbjct: 504 ILGDTIEYLKQLRRKIQDLET----------RNRQIETEQQSRSGV--TVLVGPTDKKKV 551
Query: 242 NGSLRSFWLQRKSKDTE----VDVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDL 295
+ K+ +TE V V II+ + +++ + LL V +L EL++++
Sbjct: 552 RIVEECGATRAKAVETEVVSSVQVSIIESDALLEIECLHREGLLLDVMVMLRELRIEV 609
>IMGA|Medtr2g010480.1 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 2554546-2556774 E
EGN_Mt090430 20090702
Length = 338
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 28/149 (18%)
Query: 149 HFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKKR 208
H TER+RR+ + ++ L LVPN K D+ASV+G+AI Y+K++ V+ L+
Sbjct: 163 HIVTERKRREKLSQRFIALSALVPNLKKMDKASVLGEAIRYLKQMEEKVSVLE------- 215
Query: 209 CARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDT--EVDVRIIDD 266
E KR+K E + IV S N R+ +T E++ R +
Sbjct: 216 ---EEQKRKKTVESVV-------IVKKSQLSMNEAEDRADTNNSTYDETLPEIEARFCER 265
Query: 267 EVTIKLVQRKKINCLL---FVSKVLDELQ 292
V I+L +CL + K++ E++
Sbjct: 266 SVLIRL------HCLKSQGVIEKIMSEIE 288
>IMGA|Medtr2g127270.1 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 31023616-31022854 H
EGN_Mt090430 20090702
Length = 175
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Query: 147 IKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEK 206
+ H TER RR+ + K+ +L +P K D+ V+G+A+ Y+ +L V EL+ ++K
Sbjct: 59 LDHIITERNRRRELTRKFIELSAFIPGLKKTDKVHVLGEAVKYVAQLQERVKELEEDIKK 118
Query: 207 KRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDVRIIDD 266
K S+ + S ++DD D + + + + ++ E++VR++
Sbjct: 119 KGAG------------SLITITRSHLLDDNDTAMGEMNTKECYRHNETF-PELEVRVLGK 165
Query: 267 EVTIKL 272
EV IK+
Sbjct: 166 EVLIKI 171
>IMGA|Medtr3g150170.1 Helix-loop-helix DNA-binding
chr03_pseudomolecule_IMGAG_V3 39512412-39514795 E
EGN_Mt090430 20090702
Length = 321
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 147 IKHFATERQRRQHIKDKYDDLRNLVPNP--SKNDRASVVGDAINYIKELLRTVNELKILV 204
+ H ER RR+ + + + LR+L+P+ + D+AS++G AIN++KEL + + +
Sbjct: 116 MTHITVERNRRKQMNEYLNVLRSLMPSSYVQRGDQASIIGGAINFVKELEQHLQSM---- 171
Query: 205 EKKRCARERGKRQKIEE--DSIG--------------NVHESKIVDDPDQSFNNGSLRSF 248
G ++K +E ++IG S ++ + + ++
Sbjct: 172 ---------GGQKKTKEPNENIGLNNGPPFAEFFTFPQYTTSATQNNNNNNNVTMEQHNY 222
Query: 249 WLQRKSKDTEVDVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYS 308
Q++ +++V ++D +K++ +KK L+ + L L+L + H+ V D
Sbjct: 223 QEQKQWAVADIEVTMVDSHANMKILSKKKPGQLMKIVVGLQNLRLTILHLNVTTVDDMVL 282
Query: 309 FLFNSKIYEGSSVYA----SAIANKLIEVVDRQYA 339
+ + K+ EGS + + +A N+L+ V ++ A
Sbjct: 283 YSVSIKVEEGSQLNSVDEIAAAVNRLLRTVQQELA 317
>IMGA|Medtr4g006510.1 Helix-loop-helix DNA-binding
chr04_pseudomolecule_IMGAG_V3 885745-887402 E
EGN_Mt090430 20090702
Length = 331
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 147 IKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELK 201
I H ER+RRQ + +K+ L +P SK D+AS++ +AI+Y+K+L V+EL+
Sbjct: 151 IDHIMAERKRRQELSEKFIALSATIPGLSKTDKASILREAIDYVKQLKERVDELE 205
>IMGA|Medtr4g006370.1 Helix-loop-helix DNA-binding
chr04_pseudomolecule_IMGAG_V3 826490-828020 E
EGN_Mt090430 20090702
Length = 331
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 147 IKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELK 201
I H ER+RRQ + +K+ L +P SK D+AS++ +AI+Y+K+L V+EL+
Sbjct: 151 IDHIMAERKRRQELSEKFIALSATIPGLSKTDKASILREAIDYVKQLKERVDELE 205
>IMGA|Medtr5g032280.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 13024094-13019567 E
EGN_Mt090430 20090702
Length = 325
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 25/164 (15%)
Query: 143 QGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKI 202
+G K+ ER+RR+ + D+ LR++VP SK DR S++GD I+Y+KELL +++L+
Sbjct: 151 EGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERISKLQE 210
Query: 203 LVEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDVR 262
+EK+ G Q + +G E K P++ S + F ++R+ +DT + +
Sbjct: 211 EIEKE------GTNQI---NLLGISKELK----PNEVMVRNSPK-FDVERRDQDTRISI- 255
Query: 263 IIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDY 306
K LL L+ L L++H D+
Sbjct: 256 ----------CCATKPGLLLSTVNTLEALGLEIHQCVISSFNDF 289
>IMGA|Medtr2g127330.1 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 31042247-31046673 E
EGN_Mt090430 20090702
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 16/154 (10%)
Query: 141 GRQGGN-IKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNE 199
R G + H ER+RR + K+ L +P K D+ S++G+AINY+K L V E
Sbjct: 179 SRSGSQCLDHIMAERKRRLELSQKFIALSATIPGLKKMDKTSILGEAINYVKILQERVKE 238
Query: 200 LKILVEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEV 259
L+ ER KR E +I +H+S + + + +N + S KS +V
Sbjct: 239 LE----------ERNKRNN--ESTI--IHKSDLCSNEHNNTSNDT-NSDQDCCKSSLPDV 283
Query: 260 DVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQL 293
R++++EV I++ K+ + + +L+ L L
Sbjct: 284 KARVLENEVLIEIHCEKENGIEIKILNLLENLHL 317
>IMGA|Medtr8g102390.1 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 22471596-22469940 E
EGN_Mt090430 20090702
Length = 252
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 149 HFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELK 201
H ER RR+ I + L L+PN K D+ASV+GDAI Y+KEL V L+
Sbjct: 71 HIIAERIRREKISQLFIALSALIPNLKKMDKASVLGDAIKYVKELKEQVKMLE 123
>IMGA|Medtr5g016950.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 6037873-6040692 E
EGN_Mt090430 20090702
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 149 HFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKI 202
H +E++RR I +K L+NL+PN +K D+AS++ +AI Y+K+L V L +
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSL 169
>IMGA|Medtr2g127190.1 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 30978813-30980955 H
EGN_Mt090430 20090702
Length = 250
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 41/230 (17%)
Query: 59 LYDPLFHLNLPPQPPLFRDLFQSLPPHGYSLPGSRGSSLFGGVGDDHVEGSGGVNLYQEG 118
+ + L H N RD+ +P +++P + + + +N+ Q
Sbjct: 1 MEEHLCHTNNTFDEEFLRDILYQIPQDQFNVP----------IATTDLVNNSSINVSQHA 50
Query: 119 D-----------GEQQFDNGVLDFTWDMACMG-NGRQGGN----IKHFATERQRRQHIKD 162
+ EQ D+ L + A G N ++ N + H +ER RRQ +
Sbjct: 51 EEMPTNSLSIPTTEQHHDS--LPLSSSTANQGSNSKKPRNTSDTLDHIMSERNRRQLLTS 108
Query: 163 KYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKKRCARERGKRQKIEED 222
K +L L+P K D+ VV +AINY+K+L + EL+ ++KK
Sbjct: 109 KIIELSALIPGLKKIDKVHVVTEAINYMKQLEERLKELEEDIKKKDAG------------ 156
Query: 223 SIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDVRIIDDEVTIKL 272
S+ + S+++ D D + + + R EV+ RI++ EV IK+
Sbjct: 157 SLSTITRSRVLIDKDIAIGEMNTEECY-GRNESLLEVEARILEKEVLIKI 205
>IMGA|Medtr1g024210.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 5662294-5664363 H
EGN_Mt090430 20090702
Length = 267
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 149 HFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKI 202
H +E++RR I +K L+NL+PN +K D+AS++ +AI Y+K+L V L +
Sbjct: 96 HNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLMV 149
>IMGA|Medtr2g127350.1 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 31052041-31053922 H
EGN_Mt090430 20090702
Length = 295
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 149 HFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKK 207
H ER+RR + K+ +L ++P K D+AS+V AINY+++L + V EL++ K+
Sbjct: 121 HTLAERRRRLELAHKFTELSAIIPRSKKTDKASIVQGAINYVEKLQKRVMELEVQQNKR 179
>IMGA|Medtr1g099080.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 20155123-20152958 F
EGN_Mt090430 20090702
Length = 324
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 147 IKHFATERQRRQHIKDKYDDLRNLVPNP--SKNDRASVVGDAINYIKELLRTVNELKILV 204
+ H A ER RR+ + + LR+L+P+ + D+AS++G AIN++KEL + L
Sbjct: 123 MTHIAVERNRRKQMNEYLSILRSLMPDSHIQRGDQASIIGGAINFVKELEHKFHFLGAKK 182
Query: 205 EKKRCARERGKRQKI---EEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDV 261
E+ + E G + E + S V D S + +Q D ++V
Sbjct: 183 ERVVKSDEAGGSNNMPFSEFFTFPQYSTSGSVCDNSNSVATIGEKVGEIQSCIAD--IEV 240
Query: 262 RIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKI 315
++++ +K+ RK+ LL + L ++L + H+ +G+ + + K+
Sbjct: 241 TMVENHANLKIRSRKRPKQLLKIVSGLQNMRLTILHLNVTTIGEIVLYSLSVKV 294
>IMGA|Medtr5g014710.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 4753537-4757846 F
EGN_Mt090430 20090702
Length = 333
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 27/151 (17%)
Query: 146 NIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVE 205
N H ER+RR+ + L L+P K D+ASV+GDAI Y+KEL
Sbjct: 155 NQDHIIAERKRREKLSQCLIALAALIPGLKKMDKASVLGDAIKYVKEL------------ 202
Query: 206 KKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTE----VDV 261
+R ++ E+ N H +V +Q + S S + S + E V+
Sbjct: 203 --------QERLRVLEEQNKNSHVQSVVTVDEQQLSYDSSNSDDSEVASGNNETLPHVEA 254
Query: 262 RIIDDEVTIKLVQRKKINCLLFVSKVLDELQ 292
+++D +V I++ +K+ LL K+L E+Q
Sbjct: 255 KVLDKDVLIRIHCQKQKGLLL---KILVEIQ 282