Jatropha Genome Database

JcCA0120961.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0120961.20 - phase: 0 /partial
         (202 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g041560.1 E1-E2 ATPase-associated region chr02_pseudo...   226   4e-60
IMGA|Medtr3g133380.1 E1-E2 ATPase-associated region chr03_pseudo...   223   4e-59
IMGA|Medtr8g129390.1 Plasma-membrane proton-efflux P-type ATPase...   218   2e-57
IMGA|Medtr8g129390.3 Plasma-membrane proton-efflux P-type ATPase...   215   1e-56
IMGA|Medtr8g129390.2 Plasma-membrane proton-efflux P-type ATPase...   195   1e-50

>IMGA|Medtr2g041560.1 E1-E2 ATPase-associated region
           chr02_pseudomolecule_IMGAG_V3 11420475-11424154 E
           EGN_Mt090430 20090702
          Length = 571

 Score =  226 bits (577), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 110/204 (53%), Positives = 144/204 (70%), Gaps = 2/204 (0%)

Query: 1   NELEEQLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIAT 60
           ++  ++L +A+YLQVS +SQALIFVTRSRSWS+ ERPG+LL  AF++AQLIAT+I+  A 
Sbjct: 368 HDSPDELTAALYLQVSIVSQALIFVTRSRSWSYVERPGMLLMGAFVIAQLIATLIAVYAN 427

Query: 61  WKFAGIRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNF 120
           W FA I+ IGWGW GVIWLY+++ Y+ LD IKFA+RY LSGKAW  ++E +TAFTNKK++
Sbjct: 428 WGFARIQGIGWGWAGVIWLYSIIFYIPLDIIKFAIRYGLSGKAWTNLLENKTAFTNKKDY 487

Query: 121 GKXXXXXXXXXXQRTLHGLRSAER--KLFSERNTFGDISXXXXXXXXXXXXXXXXXLHTL 178
           GK          QRTLHGL + E    LF+++NT+ ++S                 LHTL
Sbjct: 488 GKEEREAQWAHAQRTLHGLSAPEETSSLFNDKNTYRELSEIAEQAKRRAEVARLRELHTL 547

Query: 179 KGKVESFAKLRGLDIDAINQHYTV 202
           KG VES  KL+GLDI+ + QHYTV
Sbjct: 548 KGHVESVVKLKGLDIETMQQHYTV 571


>IMGA|Medtr3g133380.1 E1-E2 ATPase-associated region
           chr03_pseudomolecule_IMGAG_V3 33791890-33787859 E
           EGN_Mt090430 20090702
          Length = 569

 Score =  223 bits (569), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 107/200 (53%), Positives = 141/200 (70%), Gaps = 1/200 (0%)

Query: 4   EEQLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATWKF 63
            +++ +A+YLQVS ISQALIFVTRSRSWS  ERPGLLL  AF++AQL+AT I+  A W F
Sbjct: 370 PDEMMAALYLQVSIISQALIFVTRSRSWSVVERPGLLLLGAFMIAQLLATFIAVYANWSF 429

Query: 64  AGIRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFGKX 123
           A I+ +GWGW GVIW+Y+++TY+ LD +KF +RY LSGKAWD ++E +TAFT KK++GK 
Sbjct: 430 ARIKGMGWGWAGVIWMYSIVTYIPLDILKFVIRYVLSGKAWDNLLENKTAFTTKKDYGKE 489

Query: 124 XXXXXXXXXQRTLHGLRSAE-RKLFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKGKV 182
                    QRTLHGL+S +   LF+++N++ ++S                 LHTLKG V
Sbjct: 490 EREAQWATAQRTLHGLQSPDTTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHV 549

Query: 183 ESFAKLRGLDIDAINQHYTV 202
           ES  KL+GLDID + QHYTV
Sbjct: 550 ESVVKLKGLDIDTMQQHYTV 569


>IMGA|Medtr8g129390.1 Plasma-membrane proton-efflux P-type ATPase
           chr08_pseudomolecule_IMGAG_V3 30552356-30555817 E
           EGN_Mt090430 20090702
          Length = 589

 Score =  218 bits (554), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 106/200 (53%), Positives = 139/200 (69%), Gaps = 1/200 (0%)

Query: 4   EEQLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATWKF 63
            +++ SA+YLQVS +SQALIFVTRSR WSF ERPG LL  AF +AQLIAT+I+  A W F
Sbjct: 390 HDEMMSALYLQVSIVSQALIFVTRSRGWSFLERPGALLVIAFFIAQLIATIIAVYANWGF 449

Query: 64  AGIRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFGKX 123
           A ++ IGWGW GVIWLY+++ Y+ LD +KFA+RY LSGKAW+ +++ +TAFT KK++GK 
Sbjct: 450 AKVQGIGWGWAGVIWLYSIVFYIPLDVMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKE 509

Query: 124 XXXXXXXXXQRTLHGLRSAERK-LFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKGKV 182
                    QRTLHGL+  E   +F+E++++ ++S                 LHTLKG V
Sbjct: 510 EREAQWAHAQRTLHGLQPPESSGIFNEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHV 569

Query: 183 ESFAKLRGLDIDAINQHYTV 202
           ES  KL+GLDID I QHYTV
Sbjct: 570 ESVVKLKGLDIDTIQQHYTV 589


>IMGA|Medtr8g129390.3 Plasma-membrane proton-efflux P-type ATPase
           chr08_pseudomolecule_IMGAG_V3 30554243-30555817 E
           EGN_Mt090430 20090702
          Length = 197

 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 106/197 (53%), Positives = 137/197 (69%), Gaps = 1/197 (0%)

Query: 7   LASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATWKFAGI 66
           + SA+YLQVS +SQALIFVTRSR WSF ERPG LL  AF +AQLIAT+I+  A W FA +
Sbjct: 1   MMSALYLQVSIVSQALIFVTRSRGWSFLERPGALLVIAFFIAQLIATIIAVYANWGFAKV 60

Query: 67  RSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFGKXXXX 126
           + IGWGW GVIWLY+++ Y+ LD +KFA+RY LSGKAW+ +++ +TAFT KK++GK    
Sbjct: 61  QGIGWGWAGVIWLYSIVFYIPLDVMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEERE 120

Query: 127 XXXXXXQRTLHGLRSAERK-LFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKGKVESF 185
                 QRTLHGL+  E   +F+E++++ ++S                 LHTLKG VES 
Sbjct: 121 AQWAHAQRTLHGLQPPESSGIFNEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESV 180

Query: 186 AKLRGLDIDAINQHYTV 202
            KL+GLDID I QHYTV
Sbjct: 181 VKLKGLDIDTIQQHYTV 197


>IMGA|Medtr8g129390.2 Plasma-membrane proton-efflux P-type ATPase
           chr08_pseudomolecule_IMGAG_V3 30552356-30555817 E
           EGN_Mt090430 20090702
          Length = 584

 Score =  195 bits (495), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 95/190 (50%), Positives = 130/190 (68%), Gaps = 1/190 (0%)

Query: 5   EQLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATWKFA 64
           +++ SA+YLQVS +SQALIFVTRSR WSF ERPG LL  AF +AQLIAT+I+  A W FA
Sbjct: 391 DEMMSALYLQVSIVSQALIFVTRSRGWSFLERPGALLVIAFFIAQLIATIIAVYANWGFA 450

Query: 65  GIRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFGKXX 124
            ++ IGWGW GVIWLY+++ Y+ LD +KFA+RY LSGKAW+ +++ +TAFT KK++GK  
Sbjct: 451 KVQGIGWGWAGVIWLYSIVFYIPLDVMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEE 510

Query: 125 XXXXXXXXQRTLHGLRSAERK-LFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKGKVE 183
                   QRTLHGL+  E   +F+E++++ ++S                 LHTLKG VE
Sbjct: 511 REAQWAHAQRTLHGLQPPESSGIFNEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVE 570

Query: 184 SFAKLRGLDI 193
           S  KL+ + +
Sbjct: 571 SVVKLKAIKV 580