Jatropha Genome Database

JcCA0120941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0120941.10 - phase: 0 
         (257 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g012360.1 hypothetical protein chr04_pseudomolecule_I...   233   8e-62
IMGA|Medtr4g073770.1 hypothetical protein chr04_pseudomolecule_I...   184   3e-47

>IMGA|Medtr4g012360.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 2081765-2079879 E
           EGN_Mt090430 20090702
          Length = 275

 Score =  233 bits (593), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 134/251 (53%), Positives = 171/251 (68%), Gaps = 11/251 (4%)

Query: 1   MMALKAI-NTSFSPTKHTL-FRTRRPIN---QKNSILYLCXXXXXXXXXXXXXXX-XGDT 54
           M+ALKAI + +F P+ +T  F T  P +   ++ S ++LC                 GD 
Sbjct: 14  MIALKAIFHPTFYPSNNTTTFSTLHPHHNTARRRSSVFLCLCSTNSNDEPDNNSKPGGDV 73

Query: 55  RKQELLARIAMLQAQKVRLTDYLDERSAYLTQFAEEANAEFDKIGEDALKGLDEAGTRIM 114
           + QELLA++AML+ +KVRLTDYLDERS YLTQF EEA AE DKIGEDALKGLDEA  RI 
Sbjct: 74  QSQELLAQLAMLETEKVRLTDYLDERSEYLTQFGEEAKAEIDKIGEDALKGLDEASDRIT 133

Query: 115 ENIESQMQAFEESAELNKQEIEKNENKIADFEGQIVKDRNEGMFFKNLGQKPP-VDKAKA 173
             IES+M AFEES EL++ E E++ENK+ + EGQ+  DRNEG+FFKNLGQK   VDKAKA
Sbjct: 134 AKIESEMLAFEESNELDRVEFEESENKVMEIEGQMEVDRNEGLFFKNLGQKGANVDKAKA 193

Query: 174 KVEAERIKELIKT-KAGSKARKNIYLALIGVLVIVIADSF-IS--SSPDWRKVAVLGAIL 229
           K E E++K++  + K G K RKN+YL  IG+    I  S  +S  SS DW++VAVLGAIL
Sbjct: 194 KEEIEKMKDVTTSEKNGRKTRKNVYLFFIGLFTYGIVGSINVSSLSSTDWKRVAVLGAIL 253

Query: 230 VGLITQLSYEQ 240
           + L +Q  +EQ
Sbjct: 254 LALFSQFIFEQ 264


>IMGA|Medtr4g073770.1 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 14712100-14713875 E
           EGN_Mt090430 20090702
          Length = 175

 Score =  184 bits (467), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 101/178 (56%), Positives = 124/178 (69%), Gaps = 16/178 (8%)

Query: 65  MLQAQKVRLTDYLDERSAYLTQFAEEANAEFDKIGEDALKGLDEAGTRIMENIESQMQAF 124
           ML+ +KVRLTDYLDERS YLTQF EEA AE DKIGEDALKGLDEA  RI   IES+M AF
Sbjct: 1   MLETEKVRLTDYLDERSEYLTQFGEEAKAEIDKIGEDALKGLDEASDRITAKIESEMLAF 60

Query: 125 EESAELNKQEIEKNENKIADFEGQIVKDRNEGMFFKNLGQKPP-VDKAKAKVEAERIKEL 183
           EES EL++ E E++ENK+ + EGQ+  DRNEG+FFKNLGQK   VDKAKAK E E++K++
Sbjct: 61  EESNELDRVEFEESENKVMEIEGQMEVDRNEGLFFKNLGQKGANVDKAKAKEEIEKMKDV 120

Query: 184 IKT-KAGSKARKNIYLALIGVLVIVIADSFISSSPDWRKVAVLGAILVGLITQLSYEQ 240
             + K G K ++   L L                 DW++VAVLGAIL+ L +Q  +EQ
Sbjct: 121 TTSEKNGRKTKEKCLLIL--------------HCTDWKRVAVLGAILLALFSQFIFEQ 164