Jatropha Genome Database
- JcCA0118311.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0118311.10 + phase: 0 /pseudo/partial
(207 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g122050.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 127 4e-30
IMGA|Medtr8g016050.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 125 1e-29
IMGA|Medtr4g159330.1 AUX/IAA protein chr04_pseudomolecule_IMGAG_... 84 6e-17
IMGA|Medtr5g076260.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_... 78 2e-15
IMGA|Medtr5g032240.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_... 77 9e-15
IMGA|Medtr2g122570.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 72 1e-13
IMGA|Medtr1g117600.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 72 2e-13
IMGA|Medtr8g078700.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 72 3e-13
IMGA|Medtr1g083410.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 70 8e-13
IMGA|Medtr1g117720.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_... 69 1e-12
IMGA|Medtr8g133620.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 68 3e-12
IMGA|AC233668_17.1 AUX/IAA protein AC233668.2 65033-67329 F EGN_... 68 4e-12
IMGA|Medtr2g123410.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_... 64 5e-11
IMGA|Medtr8g121180.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_... 58 3e-09
IMGA|AC233783_2.2 AUX/IAA protein AC233783.1 17994-15951 E EGN_M... 54 4e-08
IMGA|Medtr4g152210.1 AUX/IAA protein; Transcriptional factor B3;... 54 6e-08
IMGA|Medtr8g129010.1 Aux/IAA_ARF_dimerisation chr08_pseudomolecu... 53 1e-07
IMGA|Medtr3g137460.1 AUX/IAA protein chr03_pseudomolecule_IMGAG_... 52 2e-07
IMGA|AC233668_17.2 AUX/IAA protein AC233668.2 65033-67329 F EGN_... 47 7e-06
>IMGA|Medtr2g122050.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29123619-29119970 E EGN_Mt090430 20090702
Length = 269
Score = 127 bits (319), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 80/105 (76%), Gaps = 4/105 (3%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTG- 160
+ GVPIGRK++LNAY SY LS A+D+LFRGLL AQR++ NK + + + +TG
Sbjct: 154 MDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKE--EEEKVITGL 211
Query: 161 -TESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSELS 204
SGEYTLVY+D+EGD +LVGDVPW MFVST KRLRVLKS+ELS
Sbjct: 212 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELS 256
>IMGA|Medtr8g016050.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
2999212-2995668 F EGN_Mt090430 20090702
Length = 271
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 6/104 (5%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTG- 160
+ GVPIGRKI++NAYDSY+KLS A+D+LFRGLL E + +NK + D G+ G
Sbjct: 162 MDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLL---EEINLSHGINKKQEEE-DTGMKGS 217
Query: 161 -TESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSEL 203
T SGEYTLVY+D+EGD +LVGDVPW MFVST KRLRV KSS+L
Sbjct: 218 LTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSDL 261
>IMGA|Medtr4g159330.1 AUX/IAA protein chr04_pseudomolecule_IMGAG_V3
40172991-40176335 E EGN_Mt090430 20090702
Length = 293
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 16/108 (14%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRET----CEARNVNK---IDVAKG 154
++G P RK++LN + SY++LS A++++F +Q + C +N+++ +D+ G
Sbjct: 179 MEGAPYLRKVDLNGFSSYRELSSALEKMFSCFTISQCGSYGVSCREKNLSESRLVDLLHG 238
Query: 155 DAGLTGTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
EY L Y+D +GD +LVGDVPW+MF + KRLR++KSSE
Sbjct: 239 S---------EYVLTYEDKDGDWMLVGDVPWEMFTESCKRLRIMKSSE 277
>IMGA|Medtr5g076260.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_V3
27878822-27882652 F EGN_Mt090430 20090702
Length = 347
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RK++L Y +Y +LS +++++F Q CE+ ++ K L G+
Sbjct: 237 MDGAPYLRKVDLKNYTAYSELSSSLEKMFSCFTIGQ---CESHGNQMLNETKLRDLLHGS 293
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
E Y + Y+D +GD +LVGDVPW+MF+ T +RLR++KSS+
Sbjct: 294 E---YVITYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSD 331
>IMGA|Medtr5g032240.1 AUX/IAA protein chr05_pseudomolecule_IMGAG_V3
13000024-12994499 F EGN_Mt090430 20090702
Length = 335
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RK++L Y +YQ+LS A++++F Q + A + +K L G+
Sbjct: 222 MDGAPYLRKVDLRTYATYQQLSSALEKMFSCFTLGQCGSHGAPGKEMMSESKLRDLLHGS 281
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
E Y L Y+D +GD +LVGDVPW+MF+ T +RL+++K S+
Sbjct: 282 E---YVLTYEDKDGDWMLVGDVPWEMFIDTCRRLKIMKGSD 319
>IMGA|Medtr2g122570.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29440372-29437665 F EGN_Mt090430 20090702
Length = 326
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 15/107 (14%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RK++L Y++Y +LS A++++F Q C + + G GL+ +
Sbjct: 213 MDGAPYLRKVDLKTYNNYMELSSALEKMFTCFTIGQ---CNSPGL------PGKDGLSES 263
Query: 162 E------SGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
EY L Y+D +GD +LVGDVPW MF + +RLR++K S+
Sbjct: 264 SLRDLLHGSEYVLTYEDKDGDWMLVGDVPWGMFADSCRRLRIMKGSD 310
>IMGA|Medtr1g117600.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
25280071-25283234 E EGN_Mt090430 20090702
Length = 236
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 13/105 (12%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFR----GLLAAQRETCEARNVNKIDVAKGDAG 157
+ G P RK++L Y +Y+ LS A+ ++F G AQ ID
Sbjct: 125 MDGAPYLRKVDLTMYKTYKDLSDALAKMFSSFTTGNYGAQ---------GMIDFMNESKL 175
Query: 158 LTGTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
+ S EY Y+D +GD +LVGDVPW+MFV + KRLR++K SE
Sbjct: 176 MDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSE 220
>IMGA|Medtr8g078700.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
16132304-16127004 E EGN_Mt090430 20090702
Length = 348
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RK++L Y +YQ+LS ++++F Q + + +K L G+
Sbjct: 235 MDGAPYLRKVDLRNYTTYQELSSDLEKMFSCFTLGQCGSHGGPGKEMLSESKLKDFLHGS 294
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
E Y + Y+D +GD +LVGDVPW MF+ T KRL+++K S+
Sbjct: 295 E---YVVTYEDKDGDWMLVGDVPWDMFIDTCKRLKIMKGSD 332
>IMGA|Medtr1g083410.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
16394826-16396206 E EGN_Mt090430 20090702
Length = 204
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 22/103 (21%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLA--AQRETCEARNVNKIDVAKGDAGLT 159
+ G P RKI+L Y SY +L ++ +F+ + ++RE
Sbjct: 115 MAGAPYLRKIDLKVYKSYSELLKVLENMFKCTIGEYSERE-------------------- 154
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
G E+ Y+D +GD +LVGDVPW+MF+S+ KRLR++K SE
Sbjct: 155 GYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSE 197
>IMGA|Medtr1g117720.1 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3
25340896-25342268 F EGN_Mt090430 20090702
Length = 178
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 18/101 (17%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RKI+L Y Y +L A++ +F+ + E G
Sbjct: 92 LDGAPYLRKIDLRVYGGYAQLLKALESMFKLTIGNYSEK------------------EGY 133
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
+ EY Y+D +GD +LVGDVPW+MFV++ KRLR++K +E
Sbjct: 134 KGSEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRLRIMKGTE 174
>IMGA|Medtr8g133620.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
31937442-31938620 E EGN_Mt090430 20090702
Length = 184
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 20/101 (19%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRG-LLAAQRETCEARNVNKIDVAKGDAGLTG 160
++G+PIGRK+NL + SY L A+ +FR +L + + N
Sbjct: 101 MEGIPIGRKLNLLEHHSYDGLIKALCHMFRTTILCPNSQPLNSWNF-------------- 146
Query: 161 TESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSS 201
+ L Y+D EGD ++VGDVPW+MF+S+ KRL++ +++
Sbjct: 147 -----HVLTYEDQEGDWMMVGDVPWEMFLSSVKRLKITRAN 182
>IMGA|AC233668_17.1 AUX/IAA protein AC233668.2 65033-67329 F
EGN_Mt090430 20090702
Length = 186
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 22/103 (21%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLA--AQRETCEARNVNKIDVAKGDAGLT 159
+ G P RKI+L Y Y +L A++ +F+ + ++RE
Sbjct: 96 MDGAPYLRKIDLRIYGGYPELLKALETMFKLTIGEYSERE-------------------- 135
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
G + EY Y+D +GD +LVGDVPW MFV++ KRLR++K +E
Sbjct: 136 GYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTE 178
>IMGA|Medtr2g123410.1 AUX/IAA protein chr02_pseudomolecule_IMGAG_V3
29935021-29936158 H EGN_Mt090430 20090702
Length = 198
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 23/107 (21%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELF-------RGLLAAQRETCEARNVNKIDVAKG 154
+ G P RK++L Y+ Y L A++ +F R L +++ ++R
Sbjct: 93 VDGAPYLRKVDLEVYECYDNLLTALNTMFSTNCFTIRNDLMNEKKFMDSRK--------- 143
Query: 155 DAGLTGTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSS 201
+ EY Y+D +GD +L+GDVPW+MFV + KR+R++ SS
Sbjct: 144 -------NTNEYLATYEDKDGDWMLLGDVPWKMFVESCKRIRLMISS 183
>IMGA|Medtr8g121180.1 AUX/IAA protein chr08_pseudomolecule_IMGAG_V3
27960868-27959097 E EGN_Mt090430 20090702
Length = 208
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 26/99 (26%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
++GV I RK+NL + S+ L+ + ++F E C+
Sbjct: 134 MEGVGIARKVNLGMHHSFHTLNQTLMDMF--------EKCDH------------------ 167
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKS 200
+ +Y LVYQD EGD +L D+ W+ F+ A+RL++LKS
Sbjct: 168 DQQQYELVYQDKEGDWLLAQDISWRSFIECAQRLKLLKS 206
>IMGA|AC233783_2.2 AUX/IAA protein AC233783.1 17994-15951 E
EGN_Mt090430 20090702
Length = 222
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 21/94 (22%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGL---------LAAQRETCEARNVNKIDVA 152
+ G P RK++L + +Y++LS A++++F + Q CE+R +D+
Sbjct: 141 MDGAPYLRKVDLKIFGTYKELSSALEKMFSCFTISQFGSHGVFGQGNVCESR---LMDLL 197
Query: 153 KGDAGLTGTESGEYTLVYQDSEGDTILVGDVPWQ 186
G EY L Y+D +GD +LVGDVPW+
Sbjct: 198 HGS---------EYVLTYEDKDGDWMLVGDVPWK 222
>IMGA|Medtr4g152210.1 AUX/IAA protein; Transcriptional factor B3;
Auxin response factor chr04_pseudomolecule_IMGAG_V3
37661517-37656640 E EGN_Mt090430 20090702
Length = 821
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 27/103 (26%)
Query: 103 KGVPIGRKINLNAYDSYQKLSVAIDELF--RGLLAAQRETCEARNVNKIDVAKGDAGLTG 160
KG+ +GR ++L + Y +L+ +D+LF RG L + ++
Sbjct: 706 KGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQK--------------------- 744
Query: 161 TESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSEL 203
++ +V+ D+EGD +LVGD PWQ F S +++ + E+
Sbjct: 745 ----DWLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEI 783
>IMGA|Medtr8g129010.1 Aux/IAA_ARF_dimerisation
chr08_pseudomolecule_IMGAG_V3 30320308-30319058 H
EGN_Mt090430 20090702
Length = 173
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Query: 101 IIKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTG 160
+++G I ++I+L+ + SYQ L+ A+ ++F + C+A + + +D++ G
Sbjct: 73 VLEGRSICQRISLHNHGSYQSLAKALRQMFVDCT----DDCDAGD-HHLDLSNAIPG--- 124
Query: 161 TESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKS 200
+ + Y+D E D +L GD+ W+ FV AKR+R+L +
Sbjct: 125 -----HVIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPA 159
>IMGA|Medtr3g137460.1 AUX/IAA protein chr03_pseudomolecule_IMGAG_V3
34861254-34858528 E EGN_Mt090430 20090702
Length = 213
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 23/104 (22%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
++GV +GR+INL Y+SYQ L ++ +F + +N + TG
Sbjct: 132 MEGVGMGRQINLRLYNSYQTLKDSLISMF----------VKCQNFEE----------TGA 171
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSELST 205
YTL +Q+ +G+ L + WQ F+ T +RL +L++ E T
Sbjct: 172 N---YTLTFQNKQGEWKLTSHITWQSFIGTVRRLAILRNGECET 212
>IMGA|AC233668_17.2 AUX/IAA protein AC233668.2 65033-67329 F
EGN_Mt090430 20090702
Length = 162
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 22/87 (25%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLA--AQRETCEARNVNKIDVAKGDAGLT 159
+ G P RKI+L Y Y +L A++ +F+ + ++RE
Sbjct: 96 MDGAPYLRKIDLRIYGGYPELLKALETMFKLTIGEYSERE-------------------- 135
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQ 186
G + EY Y+D +GD +LVGDVPW+
Sbjct: 136 GYKGSEYAPTYEDKDGDWMLVGDVPWE 162