Jatropha Genome Database

JcCA0116921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0116921.10 - phase: 0 /partial
         (195 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g107740.1 Fumarate lyase; Fumarate hydratase, class I...   304   2e-83
IMGA|Medtr1g107920.1 L-Aspartase-like chr01_pseudomolecule_IMGAG...   104   2e-23

>IMGA|Medtr1g107740.1 Fumarate lyase; Fumarate hydratase, class II
           chr01_pseudomolecule_IMGAG_V3 22807066-22813739 F
           EGN_Mt090430 20090702
          Length = 491

 Score =  304 bits (778), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 155/168 (92%), Positives = 162/168 (96%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHD+FVE+SGALNTI+ SLMK+ANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT
Sbjct: 296 AAHDSFVETSGALNTISASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 355

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ MGNHVAITVGGSNGHFELNVFKP+IASNLL SVRLLGD+ ASFEKNCV
Sbjct: 356 QCEALTMVCAQVMGNHVAITVGGSNGHFELNVFKPVIASNLLQSVRLLGDSCASFEKNCV 415

Query: 121 RGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAHKEGSTLK 168
           RGIQANRERISKLLHESLMLVT+LNPKIGYD AAAVAK AHKEGSTLK
Sbjct: 416 RGIQANRERISKLLHESLMLVTSLNPKIGYDKAAAVAKKAHKEGSTLK 463


>IMGA|Medtr1g107920.1 L-Aspartase-like chr01_pseudomolecule_IMGAG_V3
           22881154-22882325 E EGN_Mt090430 20090702
          Length = 109

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 63/67 (94%)

Query: 102 LHSVRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAH 161
           L SVRLLGD+ ASFEKNCVRGIQANRERISKLLHESLMLVT+LNPKIGYD AAAVAK AH
Sbjct: 15  LLSVRLLGDSCASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDKAAAVAKKAH 74

Query: 162 KEGSTLK 168
           KEGSTLK
Sbjct: 75  KEGSTLK 81