Jatropha Genome Database
- JcCA0111951.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0111951.10 + phase: 0 /partial
(308 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g150700.1 Octicosapeptide/Phox/Bem1p; CBS chr03_pseud... 369 e-102
IMGA|Medtr3g142510.1 Octicosapeptide/Phox/Bem1p; CBS chr03_pseud... 326 1e-89
IMGA|Medtr4g144000.1 Octicosapeptide/Phox/Bem1p; CBS chr04_pseud... 315 3e-86
IMGA|Medtr7g135510.1 hypothetical protein chr07_pseudomolecule_I... 85 4e-17
IMGA|Medtr7g135330.1 CBS domain-containing protein, putative chr... 83 2e-16
IMGA|Medtr3g142510.2 Octicosapeptide/Phox/Bem1p; CBS chr03_pseud... 67 7e-12
IMGA|Medtr5g083950.2 CBS chr05_pseudomolecule_IMGAG_V3 31909635-... 50 2e-06
IMGA|Medtr5g083950.1 CBS chr05_pseudomolecule_IMGAG_V3 31909635-... 49 2e-06
>IMGA|Medtr3g150700.1 Octicosapeptide/Phox/Bem1p; CBS
chr03_pseudomolecule_IMGAG_V3 39759172-39751273 E
EGN_Mt090430 20090702
Length = 528
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/262 (70%), Positives = 216/262 (82%), Gaps = 4/262 (1%)
Query: 31 GGPDPSRKSFNSSRPGGLTGERTVKRLRLSKALTVPESTSIYDACRRMAARRVDALLLTD 90
GGP RKS + +RP GLTGERTVK LRLSKALTVPE+T++Y+ACRRMAARRVDALLLTD
Sbjct: 21 GGP---RKSISLARPMGLTGERTVKSLRLSKALTVPETTTVYEACRRMAARRVDALLLTD 77
Query: 91 SNALLCGILTDKDIATRVIAREVNLEETPISKVMTRNPVFVLSDTLAVEALQKMVQGKFR 150
SN LLCGILTDKDIAT+V+A E+N E+TP+SKVMTRNPVFVLS+TLAVEALQKMVQGKFR
Sbjct: 78 SNGLLCGILTDKDIATKVVAEEINPEDTPVSKVMTRNPVFVLSETLAVEALQKMVQGKFR 137
Query: 151 HLPVVENGEVIALLDIAKCLYDAIARMERXXXXXXXXXXXXXXXXXNWG-TSFSGPNTFI 209
HLPVVENGEV+ALLDIAKCL+DA ARMER +WG ++ ++F+
Sbjct: 138 HLPVVENGEVLALLDIAKCLHDATARMERAAEKGKAIAAAVEGVEKHWGSSNSDSNSSFV 197
Query: 210 ETLRERMFRPSLSTIVPENSKVVTVSPTETVLAATKKMLEFRTSSAVVIVDSKPRGILTS 269
E LRE++F+PSLSTI+ ENSK+VTV+PT+++L TKKM+E AVV VD KPRGI+TS
Sbjct: 198 EALREKIFKPSLSTIIHENSKMVTVAPTDSILKTTKKMVELHAGCAVVTVDGKPRGIVTS 257
Query: 270 KDILMRVIAQNLPPDSTLVEKV 291
+DILMRVIAQNLPP ST VEKV
Sbjct: 258 RDILMRVIAQNLPPASTHVEKV 279
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 60 SKALTVPESTSIYDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETP 119
SK +TV + SI ++M ++T + GI+T +DI RVIA+ + T
Sbjct: 217 SKMVTVAPTDSILKTTKKMVELHAGCAVVT-VDGKPRGIVTSRDILMRVIAQNLPPASTH 275
Query: 120 ISKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVE 156
+ KVMT NP V+ DT V+AL M GKF HLPVV+
Sbjct: 276 VEKVMTPNPECVIIDTPIVDALHTMHDGKFLHLPVVD 312
>IMGA|Medtr3g142510.1 Octicosapeptide/Phox/Bem1p; CBS
chr03_pseudomolecule_IMGAG_V3 36543726-36536896 E
EGN_Mt090430 20090702
Length = 519
Score = 326 bits (835), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/269 (61%), Positives = 206/269 (76%), Gaps = 9/269 (3%)
Query: 23 RKKASENGGGPDPSRKSFNSSRPGGLTGERTVKRLRLSKALTVPESTSIYDACRRMAARR 82
+ A+ENG G PS SS+PG GERTVK+++LSKALT+P+ T++ DACRRMAARR
Sbjct: 12 KSHAAENGNGKPPSP----SSQPGD-GGERTVKKVKLSKALTIPDGTTVTDACRRMAARR 66
Query: 83 VDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRNPVFVLSDTLAVEALQ 142
VDA+LLTDS+ALL GILTDKD+ATRV+A ++ +ET +SKVMTRNP+FV SDTLA++ALQ
Sbjct: 67 VDAVLLTDSSALLSGILTDKDVATRVVAEGLSPDETHVSKVMTRNPIFVTSDTLAIDALQ 126
Query: 143 KMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERXXXXXXXXXXXXXXXXXNWGTSF 202
KM+QGKFRHLPVVENGEVIA+LDI KCLYDAIAR+E+ +
Sbjct: 127 KMIQGKFRHLPVVENGEVIAILDITKCLYDAIARVEKASQQGSAIAAAAVEGVEHQ---- 182
Query: 203 SGPNTFIETLRERMFRPSLSTIVPENSKVVTVSPTETVLAATKKMLEFRTSSAVVIVDSK 262
PN FI+TLRERMF+PSLSTI+ EN+KV S ++ V A K+M E R SS+V++ ++K
Sbjct: 183 RAPNAFIDTLRERMFKPSLSTILGENTKVAITSASDPVHVAAKRMQELRVSSSVIVTENK 242
Query: 263 PRGILTSKDILMRVIAQNLPPDSTLVEKV 291
+GILTSKDILMRV+A NL P+STLVEKV
Sbjct: 243 IQGILTSKDILMRVMAPNLSPESTLVEKV 271
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 68 STSIYDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRN 127
S ++ A +RM RV + ++ N + GILT KDI RV+A ++ E T + KVMT N
Sbjct: 217 SDPVHVAAKRMQELRVSSSVIVTENKIQ-GILTSKDILMRVMAPNLSPESTLVEKVMTPN 275
Query: 128 PVFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARME 178
P +T ++AL M GKF HLPVV+ +G V+A +D+ + + AI+ +E
Sbjct: 276 PQCATLETTIIDALHMMHDGKFLHLPVVDKDGNVVACVDVLQITHAAISLVE 327
>IMGA|Medtr4g144000.1 Octicosapeptide/Phox/Bem1p; CBS
chr04_pseudomolecule_IMGAG_V3 36108463-36117248 E
EGN_Mt090430 20090702
Length = 534
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 157/244 (64%), Positives = 190/244 (77%), Gaps = 2/244 (0%)
Query: 50 GERTVKRLRLSKALTVPESTSIYDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVI 109
GERTVK+LRLSKALT+ E TS+ DACRRMAARRVDA+LLTD+NALL GI+TDKDIATRVI
Sbjct: 45 GERTVKKLRLSKALTISEGTSVSDACRRMAARRVDAVLLTDANALLSGIMTDKDIATRVI 104
Query: 110 AREVNLEETPISKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKC 169
A + ++T ++KVMTRNP+FV SDTLA++ALQKMVQGKFRHLPVVENGEVIA+LDI KC
Sbjct: 105 AEGLRPDQTMVAKVMTRNPLFVTSDTLAIDALQKMVQGKFRHLPVVENGEVIAILDITKC 164
Query: 170 LYDAIARMERXXXXXXXXXXXXXXXXXNWGTSFSGPNTFIETLRERMFRPSLSTIVPENS 229
LYDAI+RME+ G++ S PN ++TLRER+FRPSLST++ EN+
Sbjct: 165 LYDAISRMEKAAEQGSAIAAAVEGAERQRGSNASAPNALLDTLRERIFRPSLSTLISENT 224
Query: 230 KVVTVSPTETVLAATKKMLEFRTSSAVVI--VDSKPRGILTSKDILMRVIAQNLPPDSTL 287
KV S + V A KKM E R +SAV++ +K +GILTSKDILMRV+AQNL P+ TL
Sbjct: 225 KVAIASAADPVYVAAKKMRELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTL 284
Query: 288 VEKV 291
VEKV
Sbjct: 285 VEKV 288
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 19/173 (10%)
Query: 24 KKASENGG-------GPDPSRKSFNSSRPGGLTGERTVKRLRLSKALTVPESTSI----- 71
+KA+E G G + R S N+S P L + R S + + E+T +
Sbjct: 173 EKAAEQGSAIAAAVEGAERQRGS-NASAPNALLDTLRERIFRPSLSTLISENTKVAIASA 231
Query: 72 ----YDACRRMAARRVD-ALLLTDSNALLCGILTDKDIATRVIAREVNLEETPISKVMTR 126
Y A ++M RV+ A++++ S + GILT KDI RV+A+ ++ E T + KVMT
Sbjct: 232 ADPVYVAAKKMRELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTP 291
Query: 127 NPVFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARME 178
NP DT ++AL M GKF HLPVV+ +G V A +D+ + + AI+ +E
Sbjct: 292 NPDCATLDTTILDALHMMHDGKFLHLPVVDRHGYVAACVDVLQITHAAISLVE 344
>IMGA|Medtr7g135510.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 32247487-32249781 E
EGN_Mt090430 20090702
Length = 124
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%)
Query: 44 RPGGLTGERTVKRLRLSKALTVPESTSIYDACRRMAARRVDALLLTDSNALLCGILTDKD 103
+ + GERTVK+L SKALT+ E S+ DACRRMAARRVDA+LLTD+N LL GI+TDK
Sbjct: 41 KANSIQGERTVKKLHSSKALTISEGISVSDACRRMAARRVDAVLLTDANGLLFGIMTDKI 100
Query: 104 IATRVI 109
AT ++
Sbjct: 101 FATGLV 106
>IMGA|Medtr7g135330.1 CBS domain-containing protein, putative
chr07_pseudomolecule_IMGAG_V3 32153436-32152695 E
EGN_Mt090430 20090702
Length = 105
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 47/59 (79%)
Query: 44 RPGGLTGERTVKRLRLSKALTVPESTSIYDACRRMAARRVDALLLTDSNALLCGILTDK 102
+ + GERTVK+L SKALT+ E S+ DACRRMAARRVDA+LLTD+N LL GI+TDK
Sbjct: 41 KANSIQGERTVKKLHSSKALTISEGISVSDACRRMAARRVDAVLLTDANGLLFGIMTDK 99
>IMGA|Medtr3g142510.2 Octicosapeptide/Phox/Bem1p; CBS
chr03_pseudomolecule_IMGAG_V3 36543726-36536896 E
EGN_Mt090430 20090702
Length = 293
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 78 MAARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRNPVFVLSDTLA 137
M RV + ++ N + GILT KDI RV+A ++ E T + KVMT NP +T
Sbjct: 1 MQELRVSSSVIVTENKI-QGILTSKDILMRVMAPNLSPESTLVEKVMTPNPQCATLETTI 59
Query: 138 VEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARME 178
++AL M GKF HLPVV+ +G V+A +D+ + + AI+ +E
Sbjct: 60 IDALHMMHDGKFLHLPVVDKDGNVVACVDVLQITHAAISLVE 101
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 247 MLEFRTSSAVVIVDSKPRGILTSKDILMRVIAQNLPPDSTLVEKV 291
M E R SS+V++ ++K +GILTSKDILMRV+A NL P+STLVEKV
Sbjct: 1 MQELRVSSSVIVTENKIQGILTSKDILMRVMAPNLSPESTLVEKV 45
>IMGA|Medtr5g083950.2 CBS chr05_pseudomolecule_IMGAG_V3
31909635-31905429 E EGN_Mt090430 20090702
Length = 243
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 70 SIYDACRRMAARRVDALLLT--DSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRN 127
++YDA + M V AL++ + GI+T++D ++I + + + T + +MT
Sbjct: 117 TVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 176
Query: 128 P--VFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 170
+ V DT + A+Q M + RH+PV+ + ++ ++ I +
Sbjct: 177 NKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMVSIGDVV 221
>IMGA|Medtr5g083950.1 CBS chr05_pseudomolecule_IMGAG_V3
31909635-31905429 E EGN_Mt090430 20090702
Length = 244
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 70 SIYDACRRMAARRVDALLLT--DSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRN 127
++YDA + M V AL++ + GI+T++D ++I + + + T + +MT
Sbjct: 118 TVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 177
Query: 128 P--VFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 170
+ V DT + A+Q M + RH+PV+ + ++ ++ I +
Sbjct: 178 NKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMVSIGDVV 222