Jatropha Genome Database

JcCA0109021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0109021.10 + phase: 0 
         (122 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g021610.1 Vacuolar H+-transporting two-sector ATPase,...   162   4e-41
IMGA|Medtr8g090270.1 Vacuolar H+-transporting two-sector ATPase,...   161   8e-41
IMGA|Medtr4g097470.1 Vacuolar H+-transporting two-sector ATPase,...   161   9e-41
IMGA|Medtr4g097360.1 Vacuolar H+-transporting two-sector ATPase,...   161   9e-41
IMGA|Medtr2g056220.1 Vacuolar ATP synthase 16 kDa proteolipid su...    47   3e-06

>IMGA|Medtr5g021610.1 Vacuolar H+-transporting two-sector ATPase, C
           subunit chr05_pseudomolecule_IMGAG_V3 8286373-8283699 E
           EGN_Mt090430 20090702
          Length = 164

 Score =  162 bits (410), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 88/120 (73%), Positives = 89/120 (74%)

Query: 3   TGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 62
            GFSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   AGFSGDETAPFFGFLGAAAALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 63  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 122
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIG+VGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGVVGDAGVR 121


>IMGA|Medtr8g090270.1 Vacuolar H+-transporting two-sector ATPase, C
           subunit chr08_pseudomolecule_IMGAG_V3 19653558-19655192
           E EGN_Mt090430 20090702
          Length = 164

 Score =  161 bits (407), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 88/118 (74%), Positives = 88/118 (74%)

Query: 5   FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 64
           FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV
Sbjct: 4   FSGDETAPLFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 63

Query: 65  LGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 122
           LGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct: 64  LGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121


>IMGA|Medtr4g097470.1 Vacuolar H+-transporting two-sector ATPase, C
           subunit chr04_pseudomolecule_IMGAG_V3 20872715-20870479
           E EGN_Mt090430 20090702
          Length = 164

 Score =  161 bits (407), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 88/118 (74%), Positives = 88/118 (74%)

Query: 5   FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 64
           FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV
Sbjct: 4   FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 63

Query: 65  LGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 122
           LGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct: 64  LGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121


>IMGA|Medtr4g097360.1 Vacuolar H+-transporting two-sector ATPase, C
           subunit chr04_pseudomolecule_IMGAG_V3 20814371-20816546
           F EGN_Mt090430 20090702
          Length = 164

 Score =  161 bits (407), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 88/118 (74%), Positives = 88/118 (74%)

Query: 5   FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 64
           FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV
Sbjct: 4   FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 63

Query: 65  LGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 122
           LGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct: 64  LGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121


>IMGA|Medtr2g056220.1 Vacuolar ATP synthase 16 kDa proteolipid
          subunit, putative chr02_pseudomolecule_IMGAG_V3
          15296107-15296369 E EGN_Mt090430 20090702
          Length = 59

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 7/61 (11%)

Query: 5  FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 64
          F GDETAP             SCMG A GT KSGVG ASMGV+R       +VP  + G 
Sbjct: 4  FIGDETAPFFGFLGAAATLVFSCMGVACGTTKSGVGAASMGVIR-------VVPTNLEGR 56

Query: 65 L 65
          L
Sbjct: 57 L 57