Jatropha Genome Database

JcCA0098081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0098081.10 - phase: 0 /partial
         (129 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g136450.1 Glycosyl transferase, family 20; Trehalose-...   124   1e-29

>IMGA|Medtr4g136450.1 Glycosyl transferase, family 20;
           Trehalose-phosphatase chr04_pseudomolecule_IMGAG_V3
           33321734-33328266 E EGN_Mt090430 20090702
          Length = 522

 Score =  124 bits (312), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/131 (54%), Positives = 90/131 (68%), Gaps = 11/131 (8%)

Query: 2   MLRDEDIYTFFEPELPNE--PPAKA-RCRSLDPVTSHLPKVPCSRSRSKA-HLNKQRSMS 57
           + +DED+Y FFEPELP+E  P AKA R  S  P  S LP+    ++  KA    KQRS+S
Sbjct: 388 LAKDEDVYKFFEPELPSEVSPMAKAMRSNSCRP--SSLPRFSSGKNGPKASQYKKQRSLS 445

Query: 58  TLERNKV----GTPAWRPIQHDRIKMHEGSSVLDLKAENYFSCAVSRKRSNARYLLGTSD 113
            ++R +V    G P WRP   DR  +HEGSSVLDLK +NYFSC+V+RKRS+ARYLL TS 
Sbjct: 446 NIDRREVDPASGDP-WRPTGRDRTSLHEGSSVLDLKGDNYFSCSVARKRSSARYLLKTSQ 504

Query: 114 DVVILLKELAD 124
           D+V LL +LAD
Sbjct: 505 DIVNLLSDLAD 515