Jatropha Genome Database
- JcCA0097961.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0097961.10 + phase: 0 /partial
(411 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g013160.2 Nucleotide-binding, alpha-beta plait chr03_... 510 e-145
IMGA|Medtr3g013160.3 Nucleotide-binding, alpha-beta plait chr03_... 508 e-144
IMGA|Medtr3g013160.1 Nucleotide-binding, alpha-beta plait chr03_... 506 e-143
IMGA|Medtr4g032620.1 RNA-binding region RNP-1 (RNA recognition m... 498 e-141
IMGA|Medtr4g032540.1 RNA-binding region RNP-1 (RNA recognition m... 497 e-141
IMGA|Medtr2g014820.1 Nucleotide-binding, alpha-beta plait chr02_... 231 4e-61
IMGA|Medtr2g014810.1 Nucleotide-binding, alpha-beta plait chr02_... 191 8e-49
IMGA|Medtr3g087340.1 Nucleotide-binding, alpha-beta plait chr03_... 65 6e-11
IMGA|Medtr1g149790.1 RNA-binding region RNP-1 (RNA recognition m... 64 2e-10
IMGA|Medtr5g078580.1 RNA-binding region RNP-1 (RNA recognition m... 62 7e-10
IMGA|Medtr7g145980.1 Calcium-binding EF-hand; Nucleotide-binding... 60 2e-09
IMGA|Medtr4g141620.1 RNA-binding region RNP-1 (RNA recognition m... 57 1e-08
IMGA|Medtr2g008300.1 Zinc finger, CCHC-type; Nucleotide-binding,... 55 8e-08
IMGA|Medtr3g144450.2 Nucleotide-binding, alpha-beta plait chr03_... 54 1e-07
IMGA|Medtr3g144450.1 Alba, DNA/RNA-binding protein; Nucleotide-b... 54 1e-07
IMGA|Medtr2g117480.1 Nucleotide-binding, alpha-beta plait chr02_... 49 3e-06
IMGA|Medtr5g073010.1 Nucleotide-binding, alpha-beta plait chr05_... 49 4e-06
IMGA|Medtr1g076830.1 RNA-binding region RNP-1 (RNA recognition m... 49 5e-06
>IMGA|Medtr3g013160.2 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 2411504-2404739 E
EGN_Mt090430 20090702
Length = 624
Score = 510 bits (1314), Expect = e-145, Method: Compositional matrix adjust.
Identities = 250/292 (85%), Positives = 263/292 (90%), Gaps = 6/292 (2%)
Query: 121 SGFDMAPPPSAMLXXXXXXXXXXXQIPGTNPAISGMFPNMFPLGTGQQFGALPVMPVQAM 180
SGFDMAPP SA+L QI G +PAI GMFPNMFPL T Q F ALPV+PVQAM
Sbjct: 224 SGFDMAPPTSAILGATGVAG----QITGASPAIPGMFPNMFPLPTNQPFSALPVLPVQAM 279
Query: 181 TQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAF 240
TQQATRHARRVYVGGL PTANEQSVATFFSQVMA IGGNTAGPGDAVVNVYINH+KKFAF
Sbjct: 280 TQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAF 339
Query: 241 VEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPG 300
VEMRSVEEASNAMALDGIIFEGAPVKVRRP+DYNPSLAA LGPSQPNPNLNL VGL+PG
Sbjct: 340 VEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSPG 399
Query: 301 SAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 360
SAGGL+GPDRIFVGG+PYYFTE QIRELLE+FGPLRGFDLVKDRETGNSKGYAFCVYQDL
Sbjct: 400 SAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDL 459
Query: 361 SVTDIACAALNGIKMGDKTLTVRRANQGAN--QPKPEQENVLLHAQQQIALQ 410
+VTDIACAALNGIKMGDKTLTVRRANQ N QPKPEQE++L+HAQQQIALQ
Sbjct: 460 AVTDIACAALNGIKMGDKTLTVRRANQNTNPMQPKPEQESILMHAQQQIALQ 511
>IMGA|Medtr3g013160.3 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 2411504-2405920 E
EGN_Mt090430 20090702
Length = 564
Score = 508 bits (1308), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/294 (85%), Positives = 263/294 (89%), Gaps = 8/294 (2%)
Query: 121 SGFDMAPPPSAMLXXXXXXXXXXXQIPGTNPAISGMFPNMFPLGTGQ--QFGALPVMPVQ 178
SGFDMAPP SA+L QI G +PAI GMFPNMFPL T Q F ALPV+PVQ
Sbjct: 224 SGFDMAPPTSAILGATGVAG----QITGASPAIPGMFPNMFPLPTNQVQPFSALPVLPVQ 279
Query: 179 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 238
AMTQQATRHARRVYVGGL PTANEQSVATFFSQVMA IGGNTAGPGDAVVNVYINH+KKF
Sbjct: 280 AMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKF 339
Query: 239 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 298
AFVEMRSVEEASNAMALDGIIFEGAPVKVRRP+DYNPSLAA LGPSQPNPNLNL VGL+
Sbjct: 340 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLS 399
Query: 299 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 358
PGSAGGL+GPDRIFVGG+PYYFTE QIRELLE+FGPLRGFDLVKDRETGNSKGYAFCVYQ
Sbjct: 400 PGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQ 459
Query: 359 DLSVTDIACAALNGIKMGDKTLTVRRANQGAN--QPKPEQENVLLHAQQQIALQ 410
DL+VTDIACAALNGIKMGDKTLTVRRANQ N QPKPEQE++L+HAQQQIALQ
Sbjct: 460 DLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQPKPEQESILMHAQQQIALQ 513
>IMGA|Medtr3g013160.1 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 2411504-2404739 E
EGN_Mt090430 20090702
Length = 626
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/294 (85%), Positives = 263/294 (89%), Gaps = 8/294 (2%)
Query: 121 SGFDMAPPPSAMLXXXXXXXXXXXQIPGTNPAISGMFPNMFPLGTGQ--QFGALPVMPVQ 178
SGFDMAPP SA+L QI G +PAI GMFPNMFPL T Q F ALPV+PVQ
Sbjct: 224 SGFDMAPPTSAILGATGVAG----QITGASPAIPGMFPNMFPLPTNQVQPFSALPVLPVQ 279
Query: 179 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 238
AMTQQATRHARRVYVGGL PTANEQSVATFFSQVMA IGGNTAGPGDAVVNVYINH+KKF
Sbjct: 280 AMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKF 339
Query: 239 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 298
AFVEMRSVEEASNAMALDGIIFEGAPVKVRRP+DYNPSLAA LGPSQPNPNLNL VGL+
Sbjct: 340 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLS 399
Query: 299 PGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 358
PGSAGGL+GPDRIFVGG+PYYFTE QIRELLE+FGPLRGFDLVKDRETGNSKGYAFCVYQ
Sbjct: 400 PGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQ 459
Query: 359 DLSVTDIACAALNGIKMGDKTLTVRRANQGAN--QPKPEQENVLLHAQQQIALQ 410
DL+VTDIACAALNGIKMGDKTLTVRRANQ N QPKPEQE++L+HAQQQIALQ
Sbjct: 460 DLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQPKPEQESILMHAQQQIALQ 513
>IMGA|Medtr4g032620.1 RNA-binding region RNP-1 (RNA recognition
motif) chr04_pseudomolecule_IMGAG_V3 7920124-7915250 E
EGN_Mt090430 20090702
Length = 586
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/263 (90%), Positives = 250/263 (95%), Gaps = 2/263 (0%)
Query: 150 NPAISGMFPNMFPLGTGQ--QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVAT 207
NPAISG+ PNMFP+G Q QF ALP+MP+QAMTQQATRHARRVYVGGLPPTANEQSVA
Sbjct: 211 NPAISGVLPNMFPMGANQMPQFSALPMMPIQAMTQQATRHARRVYVGGLPPTANEQSVAI 270
Query: 208 FFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 267
FFSQVMA IGGNTAGPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGIIFEGAPVKV
Sbjct: 271 FFSQVMANIGGNTAGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 330
Query: 268 RRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRE 327
RRP+DYNPSLAATLGPSQPNPNLNL AVGLTPGSAGGLEGPDRIFVGGLPYYFTE QIRE
Sbjct: 331 RRPTDYNPSLAATLGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTETQIRE 390
Query: 328 LLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQ 387
LLE+FGPLRGFDLVKDRETGNSKGYAFCVY DL+VTDIACAALNGIKMGDKTLTVRRANQ
Sbjct: 391 LLETFGPLRGFDLVKDRETGNSKGYAFCVYADLAVTDIACAALNGIKMGDKTLTVRRANQ 450
Query: 388 GANQPKPEQENVLLHAQQQIALQ 410
G QPKPEQE++L+HAQQQIALQ
Sbjct: 451 GTTQPKPEQESILMHAQQQIALQ 473
>IMGA|Medtr4g032540.1 RNA-binding region RNP-1 (RNA recognition
motif) chr04_pseudomolecule_IMGAG_V3 7864195-7860296 E
EGN_Mt090430 20090702
Length = 451
Score = 497 bits (1279), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/263 (90%), Positives = 250/263 (95%), Gaps = 2/263 (0%)
Query: 150 NPAISGMFPNMFPLGTGQ--QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVAT 207
NPAISG+ PNMFP+G Q QF ALP+MP+QAMTQQATRHARRVYVGGLPPTANEQSVA
Sbjct: 76 NPAISGVLPNMFPMGANQMPQFSALPMMPIQAMTQQATRHARRVYVGGLPPTANEQSVAI 135
Query: 208 FFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 267
FFSQVMA IGGNTAGPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGIIFEGAPVKV
Sbjct: 136 FFSQVMANIGGNTAGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 195
Query: 268 RRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRE 327
RRP+DYNPSLAATLGPSQPNPNLNL AVGLTPGSAGGLEGPDRIFVGGLPYYFTE QIRE
Sbjct: 196 RRPTDYNPSLAATLGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTETQIRE 255
Query: 328 LLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQ 387
LLE+FGPLRGFDLVKDRETGNSKGYAFCVY DL+VTDIACAALNGIKMGDKTLTVRRANQ
Sbjct: 256 LLETFGPLRGFDLVKDRETGNSKGYAFCVYADLAVTDIACAALNGIKMGDKTLTVRRANQ 315
Query: 388 GANQPKPEQENVLLHAQQQIALQ 410
G QPKPEQE++L+HAQQQIALQ
Sbjct: 316 GTTQPKPEQESILMHAQQQIALQ 338
>IMGA|Medtr2g014820.1 Nucleotide-binding, alpha-beta plait
chr02_pseudomolecule_IMGAG_V3 3906249-3910876 E
EGN_Mt090430 20090702
Length = 297
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 109/166 (65%), Positives = 135/166 (81%), Gaps = 1/166 (0%)
Query: 245 SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 304
S++ +++ +L G V+VRRP+DYNPSLAA LGP QP+ NLNL+AVGL+ G+ GG
Sbjct: 9 SIQRMNSSSSLYAKGHRGVAVRVRRPTDYNPSLAAVLGPCQPSANLNLSAVGLSAGTIGG 68
Query: 305 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 364
EG DRIFVGGLPYYFTE Q+RELL++FGPLR FD+V+D+ETGNSKGY FC+YQD +VTD
Sbjct: 69 AEGLDRIFVGGLPYYFTEVQMRELLQAFGPLRSFDIVRDKETGNSKGYGFCIYQDPAVTD 128
Query: 365 IACAALNGIKMGDKTLTVRRANQGANQPKPEQENVLLHAQQQIALQ 410
IACAALNG+KMGDKTLTVRRA A+ KPE++N+ AQQ IA+Q
Sbjct: 129 IACAALNGLKMGDKTLTVRRATVSAHS-KPEEDNIFARAQQHIAMQ 173
>IMGA|Medtr2g014810.1 Nucleotide-binding, alpha-beta plait
chr02_pseudomolecule_IMGAG_V3 3900492-3904376 E
EGN_Mt090430 20090702
Length = 257
Score = 191 bits (484), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 98/146 (67%), Positives = 109/146 (74%), Gaps = 7/146 (4%)
Query: 118 KRISGFDMAPPPSAMLXXXXXXXXXXXQIPGTNPAISGMFPNMFPLGTGQQFGALPVMPV 177
KR SGFDMAPP + + Q+PG I G N P G Q GAL +M V
Sbjct: 114 KRTSGFDMAPPATGVTPTVSG------QMPGIAHMIQGATQNFSPYGI-SQIGALSLMQV 166
Query: 178 QAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKK 237
Q MTQQATRHARRVYVGGLPP ANEQS+A+FFSQVM AIGGN+AG GD+VVNVYINHEKK
Sbjct: 167 QPMTQQATRHARRVYVGGLPPFANEQSIASFFSQVMIAIGGNSAGSGDSVVNVYINHEKK 226
Query: 238 FAFVEMRSVEEASNAMALDGIIFEGA 263
FAFVEMR+VEEASNAMALDGI+FE +
Sbjct: 227 FAFVEMRTVEEASNAMALDGIVFEAS 252
>IMGA|Medtr3g087340.1 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 20738248-20732884 E
EGN_Mt090430 20090702
Length = 379
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 192 YVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI------NHEKKFAFVEMRS 245
YVG L P +E+ + F Q AGP VVNVY+ N + + FVE RS
Sbjct: 28 YVGNLDPQISEELLWELFVQ---------AGP---VVNVYVPKDRVTNQHQGYGFVEFRS 75
Query: 246 VEEASNAM-ALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 304
E+A A+ L+ I G P++V + S Q +L++ A
Sbjct: 76 EEDADYAIKVLNMIKLYGKPIRVNKAS-------------QDKKSLDVGA---------- 112
Query: 305 LEGPDRIFVGGLPYYFTEAQIRELLESFGPL-RGFDLVKDRETGNSKGYAFCVYQDLSVT 363
+F+G L E + + +FG + +++D +TGNS+G+ F Y +
Sbjct: 113 -----NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEAS 167
Query: 364 DIACAALNGIKMGDKTLTVRRA 385
D A A+NG + ++ +TV A
Sbjct: 168 DSAIEAMNGQYLCNRQITVSYA 189
>IMGA|Medtr1g149790.1 RNA-binding region RNP-1 (RNA recognition
motif); Calcium-binding EF-hand
chr01_pseudomolecule_IMGAG_V3 33134581-33131894 E
EGN_Mt090430 20090702
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 180 MTQQA-TRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 238
+ Q+A + +RR++VG LP + + +A F + GN + + + N + F
Sbjct: 98 LNQEAESTQSRRLFVGNLPFSLSSSQLAQLFGE-----AGNVVSV-EILYDDITNRSRGF 151
Query: 239 AFVEMRSVEEASNAMAL-DGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGL 297
AFV M +VE+A A+ + DG G +KV P +G V +
Sbjct: 152 AFVTMGNVEDAEEAIRMFDGTTVGGRAIKVNFPE------VPIVGKR----------VQM 195
Query: 298 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 357
G ++ P +I+ G L + T +R+ L +V +R G S+GY F +
Sbjct: 196 GSTYRGYVDSPHKIYAGNLGWDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSF 255
Query: 358 QDLSVTDIACAALNGIKMGDKTLTVRRA 385
+ ++A +A+NG+++ + L ++ A
Sbjct: 256 ETAEDVEVALSAMNGVEVQGRPLRLKLA 283
>IMGA|Medtr5g078580.1 RNA-binding region RNP-1 (RNA recognition
motif) chr05_pseudomolecule_IMGAG_V3 29128664-29124287 E
EGN_Mt090430 20090702
Length = 393
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 311 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 370
+FVGG+P+ FTE + + +G + +LV+D+ TG SKG+AF Y+D T++A L
Sbjct: 38 VFVGGIPFDFTEGDVIAVFAQYGEVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNL 97
Query: 371 NGIKMGDKTLTV 382
NG ++ + + V
Sbjct: 98 NGAQVSGRIIRV 109
>IMGA|Medtr7g145980.1 Calcium-binding EF-hand; Nucleotide-binding,
alpha-beta plait chr07_pseudomolecule_IMGAG_V3
34831409-34837550 E EGN_Mt090430 20090702
Length = 479
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 311 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 370
+F+GGLP ++ +REL E G + L+KDRETG SKGYAF Y+ V A +
Sbjct: 106 VFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDDI 165
Query: 371 NGIKMGDKTL 380
+ + KTL
Sbjct: 166 HNKEFKGKTL 175
>IMGA|Medtr4g141620.1 RNA-binding region RNP-1 (RNA recognition
motif) chr04_pseudomolecule_IMGAG_V3 35001150-35007246 F
EGN_Mt090430 20090702
Length = 567
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 186 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 245
R R V+ +P A E+ V FFS+ +++ K ++E
Sbjct: 199 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRL------IMDRNSRRSKGVGYIEFYD 252
Query: 246 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 305
A+AL G + G PV V+ PS+ +L Q N + A VG G +
Sbjct: 253 AMSVPMAIALSGQLLLGQPVMVK-PSEAEKNLV------QSNASSGAAVVG----PYGAV 301
Query: 306 EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDI 365
+ +++VG L + TEA +RE+ E FG + L D ETG+ KG+ F + L
Sbjct: 302 DR--KLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAK- 358
Query: 366 ACAALNG-IKMGDKTLTV 382
A +LNG +++ +T+ V
Sbjct: 359 AAQSLNGKLEIAGRTIKV 376
>IMGA|Medtr2g008300.1 Zinc finger, CCHC-type; Nucleotide-binding,
alpha-beta plait chr02_pseudomolecule_IMGAG_V3
1495121-1498384 E EGN_Mt090430 20090702
Length = 334
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%)
Query: 310 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 369
R F+GGL + ++ ++++ E +G L +V D+ +G S+G+ F + D + A A
Sbjct: 73 RCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEA 132
Query: 370 LNGIKMGDKTLTVRRA 385
+NGI + +T+TV +A
Sbjct: 133 MNGIDLDGRTITVDKA 148
>IMGA|Medtr3g144450.2 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 37441701-37438704 E
EGN_Mt090430 20090702
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 252 AMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRI 311
A+AL G + G PV V+ PS+ +L + N A G+ G G ++ ++
Sbjct: 6 AIALSGQLLLGQPVMVK-PSEAEKNLVQS--------NTTTGAAGVV-GPYGAVD--RKL 53
Query: 312 FVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALN 371
+VG L + TE+Q+RE+ E FG + L D ETG+ KG+ F + + A +LN
Sbjct: 54 YVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAK-AAQSLN 112
Query: 372 G-IKMGDKTLTV 382
G +++ +T+ V
Sbjct: 113 GKLEIAGRTIKV 124
>IMGA|Medtr3g144450.1 Alba, DNA/RNA-binding protein;
Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 37441701-37432946 E
EGN_Mt090430 20090702
Length = 624
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 252 AMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRI 311
A+AL G + G PV V+ PS+ +L + N A G+ G G ++ ++
Sbjct: 6 AIALSGQLLLGQPVMVK-PSEAEKNLVQS--------NTTTGAAGVV-GPYGAVD--RKL 53
Query: 312 FVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALN 371
+VG L + TE+Q+RE+ E FG + L D ETG+ KG+ F + + A +LN
Sbjct: 54 YVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAK-AAQSLN 112
Query: 372 G-IKMGDKTLTV 382
G +++ +T+ V
Sbjct: 113 GKLEIAGRTIKV 124
>IMGA|Medtr2g117480.1 Nucleotide-binding, alpha-beta plait
chr02_pseudomolecule_IMGAG_V3 27620727-27613740 E
EGN_Mt090430 20090702
Length = 428
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 290 LNLAAVGLTPGSAGGLEGPDR-IFVGGLPYYFTEAQIRELLES-FGPLRGFDLVKDRETG 347
LN A+ G+ G GPD IFVG L T+ ++E + +G +RG +V D TG
Sbjct: 90 LNWASFGI--GERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTG 147
Query: 348 NSKGYAFCVYQDLSVTDIACAALNGI 373
SKGY F + D S + A + +NG+
Sbjct: 148 RSKGYGFVKFSDESERNRAMSEMNGV 173
>IMGA|Medtr5g073010.1 Nucleotide-binding, alpha-beta plait
chr05_pseudomolecule_IMGAG_V3 26082162-26087578 E
EGN_Mt090430 20090702
Length = 358
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 310 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 369
++FVGGL + ++R E FG + ++ D+ TG SKGY F ++D ACA
Sbjct: 17 KVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACAD 76
Query: 370 LNGIKMGDKTLTVRRAN 386
N + G RRAN
Sbjct: 77 PNPVIDG------RRAN 87
>IMGA|Medtr1g076830.1 RNA-binding region RNP-1 (RNA recognition
motif) chr01_pseudomolecule_IMGAG_V3 15462280-15464789 F
EGN_Mt090430 20090702
Length = 280
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 310 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 369
R+FVG LP+ AQ+ E+ E+ G + +++ D+ TG S+G+ F + + A
Sbjct: 85 RLFVGNLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAAEVEAAAQQ 144
Query: 370 LNGIKMGDKTLTVRRANQGANQPKPEQEN 398
LNG + + L R N G P P EN
Sbjct: 145 LNGYVVDGREL---RVNAGP-PPPPRSEN 169