Jatropha Genome Database

JcCA0081341.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0081341.40 + phase: 0 
         (156 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g127390.1 GCN5-related N-acetyltransferase chr07_pseu...   242   5e-65

>IMGA|Medtr7g127390.1 GCN5-related N-acetyltransferase
           chr07_pseudomolecule_IMGAG_V3 29859501-29860177 E
           EGN_Mt090430 20090702
          Length = 153

 Score =  242 bits (618), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 112/150 (74%), Positives = 135/150 (90%)

Query: 6   SSCEQKLQPRKLEISDKSKGFVELLQQLTICDSVSDEEFEKRFQEISTYGDDHLICVVED 65
           +S EQK + R+LEI+DK KGF+ELLQQL++CDSVSD+EFE RF+EI + GDDH+ICV+ED
Sbjct: 3   NSEEQKYRARRLEITDKKKGFIELLQQLSVCDSVSDKEFEDRFREIDSLGDDHVICVIED 62

Query: 66  DHTGKIIATGSVFIEKKFIRNCGKVGHIEDIVVDSNARGRHLGKKIVEFLTDHAHSVGCY 125
           + TGK IATGSVFIEKKF+RNCGKVGHIED+VVDS+ARG+ LGKK++ FLTDHA SVGCY
Sbjct: 63  EITGKTIATGSVFIEKKFLRNCGKVGHIEDVVVDSSARGKQLGKKVINFLTDHARSVGCY 122

Query: 126 KVILDCSIENKPFYEKCGFKQKEIQMVKYF 155
           KVILDCS+ENK FYEKCGFK+KE++M  YF
Sbjct: 123 KVILDCSVENKVFYEKCGFKEKEVEMAMYF 152